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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069752 ID=TCONS_00069752|Name=TCONS_00069752|organism=Clytia hemisphaerica|type=transcript|length=2967bp AGGATAGATGGTGAAAACACTGTATTTATTCTAGCAAGATGGACAACATG AAGTTCTGAAAGAGATGGtatgCTGAATATCAGAACGAAGTGTTGGCGAA GAAGAAACACGTGTTGACTTATTTCATGCATcgcgaagatgaaaaaagag ATTACGATATTAAGgaACTAGATTTAGAAGTTGGTGAAGTAAGAAAGCCA TCGGAGAAAGCGAAGAAAACGAAcaacaagaagaagaaagagCCTGAAAC GCCACAAAAGGAGAAACGCAGACGAAACGCTAATCCGCTTGGTATTCCAA TCCCAACAAATTTGCTAGGGAAGAGGGGAGCGgaggaaaaaaacaaagag GAGGAAAAAGAGTATGGGCCGACTGTTACTTATTATTTGGATGGTTTCGC ACAGGTCATAGATGTCAATGAACGTTTGAAGTTAGTTCTCGATGAAGTTT GTATGGCCGAACCTAAAGCTTTTCGCGCCCGCTGTAATATAGCAATAACT GACTTAAAGTTGAAGCGAGTAGCACCACAAACATTAAAAGATGAATTCGA AGCTTGTCGGCAAGTCTTGCTGACCAGGCTACCAGAGAAAGCAGAATTAT TGGAGAATATCCTGACAGAAACTGCCCGAAGTGCCGACGCTTTCATCGAA CAAGTAGAGGACGTAATTGCATCACATAAAAAGAAGATGCAAGCAGGAGA AGAACAACCACAAGAAACACAACAGCCAACAACACCTAGCACAATTGCTA CCTCTGCTGCATCCTCGTTTGGCAGAACGTCACACCATCGGAAAGCCAGT AAACCGTTACGTGTTGTGGAGGTAGGTAAAGTGAGACGTCCCATCAATCA AGATCCGATCACCGTCGATGTCAGTGATGAATTCGATTCTGACGATTCGA TGCCTGATACACCACGCCCACCGCCAATGTTGGGAAGTCAGCCGCCCACC AAACGCCCACCCGTTACTGAAACAGACCAACTGAAGATATTTACATGGAT TTTGCAGACGCTGCATATAGATACAGCAGGCGTAATGAGGTCATTACCAC AGAAAGACCTAGCTAACTCCATCAAAGATCAGAACCCATACAATCAAGGA AATACATTCCCAAAATGTCTCCCCCTGTCGCCTAATTCCTCCACGTTGCG TGGTTTTCGAACTCTTTTGCTACACCGTAAACGTCTGAGTGAACAAGTCA ACAAATCAACCACGCCTATCAATAAAGAAGCTCTCCAAGACACACCCATG TACAATGCATTAAGCTCAAGATTCAAGAGTATGTTCGTATGGCCGGCCTT TCTCGCCACCTTCATGCCGAGGAGAGCAGAAGAACTCCCATCCAAGAAGA TATTGGATCAAACACCAACCAAACTTCCGCAGTTCAATTTCAATAAACGT ATGAATATTCCAGGGCGTCGTGTACCGACGTCTCCTCAAACACGAATGCA ACACCCGATGTATGGTTCCGCATCTCCGCAGCGTAATCATAGCNACGTAT GAATATTCCAGGGCGTCGTGTACCGACGTCTCCTCAAACACGAATGCAAC ACCCGATGTATGGTTCCGCCTCTCCGCAGCGTAATCATAGTCAGTTTCCA GGACAACCACCCTATCCACCTGTGCACATGCACCAAATGGCTTACACTCG TCAACGTCCAGGGCAAACTATTCTTGGCAACCCATCTCCTTTCAATTCCT CTTCATCTACCACCATGCTGCGTCACACCACAACCAGTGGCTACGGTCAT TCAAGAGCTGAAATAAATCTTTCGCCGCAACGGTTTCCGATAGCCCCTTC ATACCCTTACAGAGCACCATACGCACCGGTGGGTAACCCTCATCAGCGAT ACATGAGCCAAATGGTACCTTTCCCAATGAGGGCTCCATCTGGTCACGGG ACGATGCAACGTCCTCCGACATCGAACACAAGTACTCAGCAACGTGAAAC AACTTCTACACAAATACCTCAACAAGACGAGACTTCCACCAGTAATCCAT CAGATAAAGGTAAAACACCTTTGGGTCGAGCAACACGTAAGAGATCGACC AATAATGAAACTACTCAACCCTCTGCTACTTCTAAACCTAAGGCAAAAGT CAAACATACTACTAAAATATGGTCACAACGCTCAGCTGAACTTTCAGACG AAAAACTGTCCAAACTTGTTGATGACTATTTAAACGAACGTAAACTCAAC ACGAAAGTTTTAAAAGTAGAACCGTCAGAGAAATCAACAGATGCACAGAC CTCGACATCGCACCAACCAAAGACCTCTAAAGATGTGTTTATGCCACGCC ACGTGCTCGATCCGCCGGCTGAGAAACGACAAATGTTAGATAATTCGGTA ATTGCGTTAGAGACAGGTAAGGAGAAGGAtgataaagaaaaagacaaaga agagAGACCTAAGAAAAGGAGAAAATCTCAATGAACTAATCAGAGAGTGA TACATGAAAGTTGCTACAGATTTCCCCTTTTTGACACTGACATTTTAAAA TACTGAATATAGCGAGTGTGCTGCTGACATAAATCATCTAAGGACGGGAT GTGATACAAAACTGACAAAATATCTCTATATATTTTGTATACTGACAAAA TTCAGAATTGATTGAAACTGGTCTCACATTGGATCTAAAGTACTGAAGAT ACAGCAATTCGATTTGTTAAGCCTCATTGTACGTTAGGAATGCTTGTGTT GTAAATATGAAATTATTGAGAACCTATTTTGTTCCGTTTTGAAAGCATGA TGGTTCATggagaaattttaattttgaaaaaaccttACCCAAATTTTGTA AACGATTTTTATCAAGTTTGTCtattttttgtataagattttTATTGTGT CTAAATAGATCAAGATAGGGTAAATATACATatattttgtagattttaaa tatgtttatgtattttatttcattatGTACAACGAAGTGTTTTGTTTTCA GCAAAAGCAAACTGGCC Run BLAST on NCBI transcript from alignment at scaffold_507:78335..84226+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069752 ID=TCONS_00069752|Name=TCONS_00069752|organism=Clytia hemisphaerica|type=transcript|length=5892bp|location=Sequence derived from alignment at scaffold_507:78335..84226+ (Clytia hemisphaerica) AGGATAGATGGTGAAAACACTGTATTTATTCTAGCAAGATGGACAACATG
AAGTTCTGAAAGAGATGGGTAGGAATCTTCAACTtactcaagcaagaaaa
agggTACCCTAAGATTTGCGCTGCATTTAGAATGGACGGGTTGAATCTAG
ccctttctttatttttaagcgGCAGGCTTTTCAAAATCTAGCGAtaggtt
ttactttcaatctggtttttgtgtgaaaaccacgcgagCATGCGTTTTGG
ATGGAAAACAattggcttcatttcccattcaGGAGTCTCGNCGCCACAAA
AGGAGAAACGCAGACGAAACGCTAATCCGCTTGGTATTCCAATCCCAACA
AATTTGCTAGGGAAGAGGGGAGCGgaggaaaaaaacaaagagGAGGAAAA
AGAGTATGGGCCGACTGTTACTTATTATTTGGATGGTTTCGCACAGGTCA
TAGATGTCAATGAACGTTTGAAGTTAGTTCTCGATGAAGTTTGTATGGCC
GAACCTAAAGCTTTTCGCGCCCGCTGTAATGTAAGTGTTCAGAAATAGAT
CTTCCATGTTGATTTCACCCTTACTTATTCGANTTCTCCTTGAAAAATAC
GTATTACTCTcaccattttctttttcagtatgCTGAATATCAGAACGAAG
TGTTGGCGAAGAAGAAACACGTGTTGACTTATTTCATGCATcgcgaagat
gaaaaaagagATTACGATATTAAGGTTTTtatttccttttccttttttgt
GAAACATTAAGATGGTTCTTCATGGGCAGTCAGCAAAACTATATCGAAAT
GGTACAAACTACAATCGCGGGAATTTTTTCTGCTccttttttatggaatt
tttatgaattttccaCCGCTTTTTTGTGCTTCTTTCGGGAAGAATGTGCC
AGAAGGAAAAATGTTACCCGTTGAACTTCATACCTACCCAGTGAATGTTA
CCTTCCTGACTGATATTCCACCCCTTTTGAGAAGTTTGCCATCTTCCTGT
TTAGCAATACTTGCAGTTTTAGTGCTGCGCACAGGAGATCGTGCGTTTCT
TCGCAAGCAGTTTATTCACGCAAACTTTAAAGATATAGAGTACAGTACTC
ATTATGCAACTCAAGCGTAGTAGACCTTACTTCCAAATTTCATTTGcttc
ctttttctttattttaggaACTAGATTTAGAAGTTGGTGAAGTAAGAAAG
GTAAAAAAGGTACTTTTCATTGCTACTTGAAACCCTCTTGGCTAACTATC
GAGATAAATCTCGCATACTAAAACAGGGGAACTGAAATAACCGGGTTCGT
TGAGAGCTATTTCAAAAACTACTATAGCCCAGGGGTGAGAAAAGCAAAGT
TAATCATCCTCCATTTCGTTTTTCCATCGAAGCCATCGGAGAAAGCGAAG
AAAACGAAcaacaagaagaagaaagagCCTGAAACGCCACAAAAGGAGAA
ACGCAGACGAAACGCTAATCCGCTTGGTATTCCAATCCCAACAAATTTGC
TAGGGAAGAGGGGAGCGgaggaaaaaaacaaagagGAGGAAAAAGAGTAT
GGGCCGACTGTTACTTATTATTTGGATGGTTTCGCACAGGTCATAGATGT
CAATGAACGTTTGAAGTTAGTTCTCGATGAAGTTTGTATGGCCGAACCTA
AAGCTTTTCGCGCCCGCTGTAATGTAAGTGTTCAGAAATAGATCTTCCAT
GTTGATTTCAACCTTACTTATTCGGTTTGCCCTAGTTTGTCCTGAAAATG
TAATGCGAGATTCAGCTTCTTTTCAGAAAAGTAGGCTAAACTCTCtaatc
aaattgttcttatgtaGTGGGTAAAGCCCTCAACATTTTTTCATTAGTGT
TTGTTCTTTTGACGGTTAGCTATCACTAACACAGTCCTGTATTTCCATCT
GAAACTAAGTGCGAATTTAATCTTCGTCAatactcaaaatcaaatttacc
TCTACAATAGTTGTTCCGACCTCCTTTCTAGATAGCAATAACTGACTTAA
AGTTGAAGCGAGTAGCACCACAAACATTAAAAGATGAATTCGAAGCTTGT
CGGCAAGTCTTGCTGACCAGGCTACCAGAGAAAGCAGAATTATTGGAGAA
GATCCTGACAGAAACTGTCCGAAGTGCCGACGCTTTCATCGAACAAGTAG
AGGACGTCNTTCATTGCTACTTGAAACCCTCTTGGCTAACTATCGAGATA
AATCTCGCATACTAAAACAGGGGAACTGAAATAACCGGGTTCGTTGAGAG
CTATTTCAAAAACTACTATAGCCCAGGGGTGAGAAAAGCAAAGTTAATCA
TCCTCCATTTCGTTTTTCCATCGAAGCCATCGGAGAAAACGAAGAAAACG
AATAAcaacaagaagaagaaagagCCTGAAACGCCACAAAAGGAGAAACG
CAGACGAAACGCTAATCCGCTTGGTATTCCAATCCCAACAAATTTGCTAG
GGAAGAGAGGAGCGgaggaaaaaaacaaagagGAGGAAAAAGAGTATGGG
CCGACTGTTACTTATTATTTGGATGGTTTCGCACAGGTCATAGATGTCAA
TGAACGTTTGAAGTTAGTTCTCGATGAAGTTTGTATGGCCGAACCTAAAG
CTTTTCGCGCCCGCTGTAATGTAAGTGTTCAGAAATAGATCTTCCATGTT
GATTTCACCCTTACTTATTCGGTTTGCCCTAGTTTGTCCTGAAAATGTAA
TGCGAGATTCAGCTTCTTTTCAGAAAAGTAGGCTAAACTCTCtaatcaaa
ttgttcttatgtaGTGGGTAAAGCCCTCAACATTTTTTCATTAGTGTTTG
TTCTTTTGACGGTTAGCTATCACTAACACAGTCCTGTATTTCCATCTGAA
ACTAAGTGCGAATTTAATCTTCGTCAatattcaaaatcaaatttaccTCT
ACAATAGTTGTTCCGACCTCCTTTCTAGATAGCAATAACTGACTTAAAGT
TGAAGCGAGTAGCACCACAAACATTAAAAGATGAATTCGAAGCTTGTCGG
CAAGTCTTGCTGACCAGGCTACCAGAGAAAGCAGAATTATTGGAGAATAT
CCTGACAGAAACTGCCCGAAGTGCCGACGCTTTCATCGAACAAGTAGAGG
ACGTAATTGCATCACATGTAAGTAATGCGATAAGTTCTCTGTGGTAGCTG
CAGGTCACCTTTTTACAACATTTAAACCAATATCAACACCaacctgaatt
tttttaataaatattctCATTAAAACTCATAGTTGTTTTAACTGGAGGTG
AATGAGAAAATGAACAATCCGACAATTCTTTGTTTTCAACCTTCTTAGAA
AAAGAAGATGCAAGCAGGAGAAGAACAACCACAAGAAACACAACAGCCAA
CAACACCTAGCACAATTGCTACCTCTGCTGCATCCTCGTTTGGCAGAACG
TCACACCATCGGAAAGCCAGTAAACCGTTACGTGTTGTGGAGGTAGGTAA
AGTGAGACGTCCCATCAATCAAGATCCGATCACCGTCGATGTCAGTGATG
AATTCGATTCTGACGATTCGATGCCTGATACACCACGCCCACCGCCAATG
TTGGGAAGTCAGCCGCCCACCAAACGCCCACCCGTTACTGAAACAGACCA
ACTGAAGATATTTACATGGATTTTGCAGGTTTGTTTCATGTTGTCGTTTG
CACAATAACaggtttttttctgttttgaattggattattcttgaaatttg
ttATCGTTCTGTTATTATTTGATTCGATTTCGAAGTTTCTTAACCTGGTA
CATCGGATGATGAGTGTCTATGCACGAAACTGGTACTAGTGTCTTATGAT
TTTTAGGAAGAAATTTGTTCTTGCTACTGAACACTTAGTTGATTTGATTC
TTTAATTTTCATGTTTGATTTGTTACTTTTATTACcaatattttgtttat
tcttcATGTGTTTTCACTACGTTCTTCCTTAGACGCTGCATATAGATACA
GCAGGCGTAATGAGGTCATTACCACAGAAAGACCTAGCTAACTCCATCAA
AGATCAGAACCCATACAATCAAGGAAATACATTCCCAAAATGTCTCCCCC
TGTCGCCTAATTCCTCCACGTTGCGTGGTTTTCGAACTCTTTTGCTACAC
CGTAAACGTCTGAGTGAACAAGTCAACAAATCAACCACGCCTATCAATAA
AGAAGCTCTCCAAGACACACCCATGTACAATGCATTAAGCTCAAGATTCA
AGAGTATGTTCGTATGGCCGGCCTTTCTCGCCACCTTCATGCCGAGGAGA
GCAGAAGAACTCCCATCCAAGAAGATATTGGATCAAACACCAACCAAACT
TCCGCAGTTCAATTTCAATAAACGTATGAATATTCCAGGGCGTCGTGTAC
CGACGTCTCCTCAAACACGAATGCAACACCCGATGTATGGTTCCGCATCT
CCGCAGCGTAATCATAGCNACGTATGAATATTCCAGGGCGTCGTGTACCG
ACGTCTCCTCAAACACGAATGCAACACCCGATGTATGGTTCCGCCTCTCC
GCAGCGTAATCATAGTCAGTTTCCAGGACAACCACCCTATCCACCTGTGC
ACATGCACCAAATGGCTTACACTCGTCAACGTCCAGGGCAAACTATTCTT
GGCAACCCATCTCCTTTCAATTCCTCTTCATCTACCACCATGCTGCGTCA
CACCACAACCAGTGGCTACGGTCATTCAAGAGCTGAAATAAATCTTTCGC
CGCAACGGTTTCCGATAGCCCCTTCATACCCTTACAGAGCACCATACGCA
CCGGTGGGTAACCCTCATCAGCGATACATGAGCCAAATGGTACCTTTCCC
AATGAGGGCTCCATCTGGTCACGGGACGATGCAACGTCCTCCGACATCGA
ACACAAGTACTCAGCAACGTGAAACAACTTCTACACAAATACCTCAACAA
GACGAGACTTCCACCAGTAATCCATCAGATAAAGGTAAAACACCTTTGGG
TCGAGCAACACGTAAGAGATCGACCAATAATGAAACTACTCAACCCTCTG
CTACTTCTAAACCTAAGGCAAAAGTCAAACATACTACTAAAATATGGTCA
CAACGCTCAGCTGAACTTTCAGACGAAAAACTGTCCAAACTTGTTGATGA
CTATTTAAACGAACGTAAACTCAACACGAAAGTTTTAAAAGTAGAACCGT
CAGAGAAATCAACAGATGCACAGACCTCGACATCGCACCAACCAAAGACC
TCTAAAGATGTGTTTATGCCACGCCACGTGCTCGATCCGCCGGCTGAGAA
ACGACAAATGTTAGATAATTCGGTAATTGCGTTAGAGACAGGTAAGGAGA
AGGAtgataaagaaaaagacaaagaagagAGACCTAAGAAAAGGAGAAAA
TCTCAATGAACTAATCAGAGAGTGATACATGAAAGTTGCTACAGATTTCC
CCTTTTTGACACTGACATTTTAAAATACTGAATATAGCGAGTGTGCTGCT
GACATAAATCATCTAAGGACGGGATGTGATACAAAACTGACAAAATATCT
CTATATATTTTGTATACTGACAAAATTCAGAATTGATTGAAACTGGTCTC
ACATTGGATCTAAAGTACTGAAGATACAGCAATTCGATTTGTTAAGCCTC
ATTGTACGTTAGGAATGCTTGTGTTGTAAATATGAAATTATTGAGAACCT
ATTTTGTTCCGTTTTGAAAGCATGATGGTTCATggagaaattttaatttt
gaaaaaaccttACCCAAATTTTGTAAACGATTTTTATCAAGTTTGTCtat
tttttgtataagattttTATTGTGTCTAAATAGATCAAGATAGGGTAAAT
ATACATatattttgtagattttaaatatgtttatgtattttatttcatta
tGTACAACGAAGTGTTTTGTTTTCAGCAAAAGCAAACTGGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00069752-exon-scaffold_507-1491911889:78335..78402 | TCONS_00069752-exon-scaffold_507-1491911889:78335..78402 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:78335..78402 | TCONS_00069752-exon-scaffold_507-1510915933:78335..78402 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:78335..78402 | TCONS_00069752-exon-scaffold_507-1575043694:78335..78402 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1491911889:78963..79058 | TCONS_00069752-exon-scaffold_507-1491911889:78963..79058 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:78963..79058 | TCONS_00069752-exon-scaffold_507-1510915933:78963..79058 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:78963..79058 | TCONS_00069752-exon-scaffold_507-1575043694:78963..79058 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1491911889:79502..79534 | TCONS_00069752-exon-scaffold_507-1491911889:79502..79534 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:79502..79534 | TCONS_00069752-exon-scaffold_507-1510915933:79502..79534 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:79502..79534 | TCONS_00069752-exon-scaffold_507-1575043694:79502..79534 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1491911889:79717..80007 | TCONS_00069752-exon-scaffold_507-1491911889:79717..80007 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:79717..80007 | TCONS_00069752-exon-scaffold_507-1510915933:79717..80007 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:79717..80007 | TCONS_00069752-exon-scaffold_507-1575043694:79717..80007 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1491911889:81263..81451 | TCONS_00069752-exon-scaffold_507-1491911889:81263..81451 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:81263..81451 | TCONS_00069752-exon-scaffold_507-1510915933:81263..81451 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:81263..81451 | TCONS_00069752-exon-scaffold_507-1575043694:81263..81451 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1491911889:81633..81962 | TCONS_00069752-exon-scaffold_507-1491911889:81633..81962 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:81633..81962 | TCONS_00069752-exon-scaffold_507-1510915933:81633..81962 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:81633..81962 | TCONS_00069752-exon-scaffold_507-1575043694:81633..81962 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1491911889:82267..84226 | TCONS_00069752-exon-scaffold_507-1491911889:82267..84226 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1510915933:82267..84226 | TCONS_00069752-exon-scaffold_507-1510915933:82267..84226 | Clytia hemisphaerica | exon |
TCONS_00069752-exon-scaffold_507-1575043694:82267..84226 | TCONS_00069752-exon-scaffold_507-1575043694:82267..84226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_507 | supercontig | scaffold_507:78335..84226 + |
Blast
The following BLAST results are available for this feature:
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