TCONS_00069331 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069331
Unique NameTCONS_00069331
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069331 ID=TCONS_00069331|Name=TCONS_00069331|organism=Clytia hemisphaerica|type=transcript|length=3204bp
CAGACCAGAAGGTCGCTAAAGCATTGGGATTGACAGAAAAAGAGGACCAG
ATAGATGAAGCAGCAAATAAAatagagaaaattaaaaaagcaaTAAGTCG
ATTTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAAGACGCAA
AGGCTAATGGACAAAATACAGACCCGAATAAGGTgcaaaatacagaccag
aataaagacaaagaaaataacaataaaacaattttcattGACGGGCGTGA
AAGCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGACAAAAC
AACACAAACAAAACAATGGAActcaagaagaaaaaattactgAAAGTTTT
AAAACTGGAACCACTTCTAACAACAAGAAACCAAATGATAATAATGTCCA
TTCTAGTATGATTTCCAAAGCTGACGGAACGTTGCCTAAGAAAGCTTTCC
ATAATAATACTAGCAACATAAACGAAAGCAAGGAAAAACAGATTATGGGT
ACAGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGAAAAACA
AACTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGATAAATC
TGGACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAAGCGTCA
GAAATTTTATATGGTCAACTGTCTAAGATGAATCCTACTCCAGATAGTCC
TGAAGAGAAGGCTTATGGATCTGTCACCAACAAAGCAACACTGAACGCTA
CTAACGAACAATTTGCATCACCGGTTCACATCGCAAACGCTCAAAACTTC
ACCGAAGGTGTTAAGGAATCGAATGAACACAAGAGAGTGCAAAGGCAGGC
TAAAAAGCGGACCATTGTAGCCTGGGTTCCAGCTCAAATGAAACATCATG
GAcatcaaatgaagaaaaatagaCGTAGTAACATTTTACAGACCACCAGA
CGAGAAACAAAGACTTTGGGTGGATTTTTAAGCAAGTTTTTGAAACACAA
GAGAAACAAAATCAGACGTAAAAATGGAAAGAGGAGTTCTGTTCATCATC
GAATAGCAAAGAAACGAAAAAGAAGCAAAGTTAAGCATTTGaagaataaa
agacattcaaaaGTAGGTGACAATGAAGTAAAGAACGCTGTTGCCACACT
AGAGTCGTTGTTGCTAGAAAAACAAAGACTCGCTAGTCATCAAAAGCCAC
TCCGTCATGTCAttgaaagaagaaataaaatacGGACCAGATATGACGAT
CAGGATGTATTTTCCAAACCAATTGACCTAACAACAAGTTGGTTTAAACG
AGACTTAAAAGCCACCAGTGATGACTATTATCCATCTCCACAGATCTACA
AAGCACCTATCCGTGACCAGAACGAAATTCGGAGCCAAATCTCACAGACC
TCAAATaacaaagatgtaaaagcacaGACTAGATCAGCATTCAAAAGCCC
CGAGGAACTTGAAAAAGAGTTGATTGCTAAAGTGAAAAAAGCTAAGAGAC
TTTTGAAGGAGAATTTTGTGGATAAAAAGAATAAGACACTGGATGAAGAC
ACGAAAGTAGATTCAATACTGTATGataaatatcaaaaacaaaatgtaGC
ATTGACTCGTAAATTAGGTCATATTCTAAACGACTCCAAAGCTGTTGATA
ACGTATTGAATAAACTAGACAACGAAGATGTCAAAAAGGAGGAAGAGTTG
AACAAGAAATATAAAGTGATTACCACAACTGCTGACGATATCTATTCTAA
AGATAAAGAGATTCTAGAAGAACAGCTTGACCGTGCCAATAGTACAGCTA
TTGATGATTTAAGAAGAGATAAGACAGACCTGGCGAATAACGGTGATGGA
GGATACATTGATGAGGAGCCTGTTGCAAGGGATTCAGCCCCGAGGAGTGG
ATTTGCGTCCAGAAATACAACCCAAGATGAAGATCCACATTCAAAATTAG
GATTCAAAGCTAGATCTTATAAGAATTCTTCCAGTGTTGAGACGGTTGAT
TATGCACGAAATTCAACCACATCAGTTCCGGATCACGCCAAAGCTGAATC
TGAACTTCATAGTATGATCGATTTAACGACTTCGACTGATTTAAAGAATG
CTGTATCTCCTTATGAGAGATCTAATACGACCAGTACGGAACAAACAGCT
AATGAAAATACTGAAGAACCAGAAACAGATGATTCTATATATCCAGAAGC
GCCAGTAACAAAAACGTCCAAAATAATTGATGAGGATAATGGGAGTGGTC
AGATTCCCAAAGGATTTGCTTCGCCTGGAAATGATGATAAGATGGAATTA
AATTCAGATGAGAAATCTTTGACGAATTCAAACCCAGAAGATTATTATTT
AGCATATGAAAAAGCAGAATATGGCAATGCTGCAGATAAAAATATCAAGG
AAGATAAGGATGTGAAAACTTTGGCAAAACCAGGCAAAGATGGAGATTCG
GATGCGAAGTTATCAGAATCGAAAACCAAGGGTGAGGAAGAGACtaaaga
gaagaaagaagagaagGATAAGGAAAATTCCAAGGTGGAGGATGCAGAAA
AAGACGAATCAACGAACAAAGACTCGGGAAGCGATTCAAAGAAATCGTcg
aaagaaaacgaaagtgaaagtgtaaGCAACAAAGATGACAAGAAGGTCTC
AGATGATAAAGACGCAGAATTAAAGaagcaaaaattaaaagaagCAAATA
GCAGAATCACACACGTTCAACTGGCTGGTCCAAACAGCATGGGATTCGGG
TTAGCTCTTAATAATAACACGTTCCAAAATGCTTTAACCAACAATACAAA
GGAGAAATCGAATAAAGATGGGACGAAGGTGAAAGGAGACAAAGAAGGAA
AGGAGGAGACTGGAGTCTTGAAATTGAAAGATGAGGAGAGTAAAACTAAC
GAGGAAAAAGATGAAGAGAAGAAGCTACGAAAAGACGAAGAGGATGAAGA
AATGAAAGAGAAAAAGGTTTCCGAGGATAAGAAACTTGGTTCTGAAACCT
CGAAGATGAATAACGAGGAGAGAAAAACTGACGAGGAAAAAGATGAAGAG
AAGAAGCTACGAAAAGACGAAGAGGATGAGGAAATGAAAGAGAAAAAGGT
TTCCGAGGATAAGAAACTTGGTTCTGAAACCTTGAAGATGAATAATGAGG
AGAGAAAAACTGACGAGGAAAAAGATGAAGAGAAGAAGCTACTAAAAGAT
GAAC
Run BLAST on NCBI

protein sequence of TCONS_00069331-protein

>TCONS_00069331-protein ID=TCONS_00069331-protein|Name=TCONS_00069331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1067bp
DQKVAKALGLTEKEDQIDEAANKIEKIKKAISRFVESSNPIEVDTDKDAK
ANGQNTDPNKVQNTDQNKDKENNNKTIFIDGRESANGDKDKTFKEDSTKQ
HKQNNGTQEEKITESFKTGTTSNNKKPNDNNVHSSMISKADGTLPKKAFH
NNTSNINESKEKQIMGTAKLANDSRNVNTDEKQTASPKEVTNAEMPAINL
DELSIDRELEQVQKASEILYGQLSKMNPTPDSPEEKAYGSVTNKATLNAT
NEQFASPVHIANAQNFTEGVKESNEHKRVQRQAKKRTIVAWVPAQMKHHG
HQMKKNRRSNILQTTRRETKTLGGFLSKFLKHKRNKIRRKNGKRSSVHHR
IAKKRKRSKVKHLKNKRHSKVGDNEVKNAVATLESLLLEKQRLASHQKPL
RHVIERRNKIRTRYDDQDVFSKPIDLTTSWFKRDLKATSDDYYPSPQIYK
APIRDQNEIRSQISQTSNNKDVKAQTRSAFKSPEELEKELIAKVKKAKRL
LKENFVDKKNKTLDEDTKVDSILYDKYQKQNVALTRKLGHILNDSKAVDN
VLNKLDNEDVKKEEELNKKYKVITTTADDIYSKDKEILEEQLDRANSTAI
DDLRRDKTDLANNGDGGYIDEEPVARDSAPRSGFASRNTTQDEDPHSKLG
FKARSYKNSSSVETVDYARNSTTSVPDHAKAESELHSMIDLTTSTDLKNA
VSPYERSNTTSTEQTANENTEEPETDDSIYPEAPVTKTSKIIDEDNGSGQ
IPKGFASPGNDDKMELNSDEKSLTNSNPEDYYLAYEKAEYGNAADKNIKE
DKDVKTLAKPGKDGDSDAKLSESKTKGEEETKEKKEEKDKENSKVEDAEK
DESTNKDSGSDSKKSSKENESESVSNKDDKKVSDDKDAELKKQKLKEANS
RITHVQLAGPNSMGFGLALNNNTFQNALTNNTKEKSNKDGTKVKGDKEGK
EETGVLKLKDEESKTNEEKDEEKKLRKDEEDEEMKEKKVSEDKKLGSETS
KMNNEERKTDEEKDEEKKLRKDEEDEEMKEKKVSEDKKLGSETLKMNNEE
RKTDEEKDEEKKLLKDE
Run BLAST on NCBI

transcript from alignment at scaffold_498:109908..114092+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069331 ID=TCONS_00069331|Name=TCONS_00069331|organism=Clytia hemisphaerica|type=transcript|length=4185bp|location=Sequence derived from alignment at scaffold_498:109908..114092+ (Clytia hemisphaerica)
CAGACCAGAAGGTCGCTAAAGCATTGGGATTGACAGAAAAAGAGGACCAG ATAGATGAAGCAGCAAATAAAatagagaaaattaaaaaagcaaTAAGTCG ATTTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAAGACGCAA AGGCTAATGGACAAAATACAGACCCGAATAAGGTgcaaaatacagaccag aataaagacaaagaaaataacaataaaacaattttcattGACGGGCGTGA AAGCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGACAAAAC AACACAAACAAAACAATGGAActcaagaagaaaaaattactgAAAGTTTT AAAACTGGAACCACTTCTAACAACAAGAAACCAAATGATAATAATGTCCA TTCTAGTATGATTTCCAAAGCTGACGGAACGTTGCCTAAGAAAGCTTTCC ATAATAATACTAGCAACATAAACGAAAGCAAGGAAAAACAGATTATGGGT ACAGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGAAAAACA AACTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGATAAATC TGGACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAAGCGTCA GAAATTTTATATGGTCAACTGTCTAAGATGAATCCTACTCCAGATAGTCC TGAAGAGAAGGTAATTATTGGTTGGTCATAGTCTTGGTCATTGAGTTTAA attccgaagggctagagtagaatctctaacctttcccaggcaagaaaaag ggAAACCACTTCTTTCCCacctagaacgcgccgcaatcataataagtggc ttcatttcccatccaggagtctcgagtatAGCCCTTCGGCCAAGCCTGAT GGCAAGTCAATGGTCGTGGTCGTATTGATTCCTAGCCCGGAAACCTGGCG ACGAAAACCGGTTTGCTGAATCCGatctttctgatttttatgATGCCGAA GACTTCAGCAACTGGTTTGGTCGCCAAAGCAGACCTAGCACAGTATCTTG ATTGGTTTAGAAACTGGAAAAGCATTTTTTACGCGTAATGACTTATTAGG GAATTCTCTCTATCACGTCATCTGCCTCTTTTGAAGCCAGATCGTCTGGC TAGCTAATTTTGTGTATAAAAAGAACACAGAAAGTCTCTTTTATTCGAGG TCAAATTCTTCACTGCTATcagttttaatattttcttgattttcccAATG ACGTCCCAATAAAGGTAGAGCGGGTTTCCTTTATACAGGTATCTGATGAA TGAAAACTAATAGCCGACAGACTATTAAGACACTTTATGATGGAGTGCTA AAAGTTGCACTTATAAATAAGAATTTAATATAGGGCAATAAAAAAAGACC TTTCAAGAAAATATTGCCGACTAAAATTGCTACACAGAAATTTTTCCCGG GCAACTTGTCTCCCTATAGGTAGGCAAAATTCATTTAAAGCACAAGCTAC AATAATTGCAATAATGTCAATAATCTCACCAGCCATACACGAATGGGAAA CAcaaaatttattcgaattatggaaatcTCGTGTTATGGAGGTTTTCTAA GGCATTGTTACCTAAGGGGACCAGAAATCTTGTTCGAGTTAGCGGATCGA AATTAAGAGACCCCACTGTAATTTGTTTCTCTTGTTTACAGGCTTATGGA TCTGTCACCAACAAAGCAACACTGAACGCTACTAACGAACAATTTGCATC ACCGGTTCACATCGCAAACGCTCAAAACTTCACCGAAGGTGTTAAGGAAT CGAATGAACACAAGAGAGTGCAAAGGCAGGCTAAAAAGCGGACCATTGTA GCCTGGGTTCCAGCTCAAATGAAACATCATGGAcatcaaatgaagaaaaa tagaCGTAGTAACATTTTACAGACCACCAGACGAGAAACAAAGACTTTGG GTGGATTTTTAAGCAAGTTTTTGAAACACAAGAGAAACAAAATCAGACGT AAAAATGGAAAGAGGAGTTCTGTTCATCATCGAATAGCAAAGAAACGAAA AAGAAGCAAAGTTAAGCATTTGaagaataaaagacattcaaaaGTAGGTG ACAATGAAGTAAAGAACGCTGTTGCCACACTAGAGTCGTTGTTGCTAGAA AAACAAAGACTCGCTAGTCATCAAAAGCCACTCCGTCATGTCAttgaaag aagaaataaaatacGGACCAGATATGACGATCAGGATGTATTTTCCAAAC CAATTGACCTAACAACAAGTTGGTTTAAACGAGACTTAAAAGCCACCAGT GATGACTATTATCCATCTCCACAGATCTACAAAGCACCTATCCGTGACCA GAACGAAATTCGGAGCCAAATCTCACAGACCTCAAATaacaaagatgtaa aagcacaGACTAGATCAGCATTCAAAAGCCCCGAGGAACTTGAAAAAGAG TTGATTGCTAAAGTGAAAAAAGCTAAGAGACTTTTGAAGGAGAATTTTGT GGATAAAAAGAATAAGACACTGGATGAAGACACGAAAGTAGATTCAATAC TGTATGataaatatcaaaaacaaaatgtaGCATTGACTCGTAAATTAGGT CATATTCTAAACGACTCCAAAGCTGTTGATAACGTATTGAATAAACTAGA CAACGAAGATGTCAAAAAGGAGGAAGAGTTGAACAAGAAATATAAAGTGA TTACCACAACTGCTGACGATATCTATTCTAAAGATAAAGAGATTCTAGAA GAACAGCTTGACCGTGCCAATAGTACAGCTATTGATGATTTAAGAAGAGA TAAGACAGACCTGGCGAATAACGGTGATGGAGGATACATTGATGAGGAGC CTGTTGCAAGGGATTCAGCCCCGAGGAGTGGATTTGCGTCCAGAAATACA ACCCAAGATGAAGATCCACATTCAAAATTAGGATTCAAAGCTAGATCTTA TAAGAATTCTTCCAGTGTTGAGACGGTTGATTATGCACGAAATTCAACCA CATCAGTTCCGGATCACGCCAAAGCTGAATCTGAACTTCATAGTATGATC GATTTAACGACTTCGACTGATTTAAAGAATGCTGTATCTCCTTATGAGAG ATCTAATACGACCAGTACGGAACAAACAGCTAATGAAAATACTGAAGAAC CAGAAACAGATGATTCTATATATCCAGAAGCGCCAGTAACAAAAACGTCC AAAATAATTGATGAGGATAATGGGAGTGGTCAGATTCCCAAAGGATTTGC TTCGCCTGGAAATGATGATAAGATGGAATTAAATTCAGATGAGAAATCTT TGACGAATTCAAACCCAGAAGATTATTATTTAGCATATGAAAAAGCAGAA TATGGCAATGCTGCAGATAAAAATATCAAGGAAGATAAGGATGTGAAAAC TTTGGCAAAACCAGGCAAAGATGGAGATTCGGATGCGAAGTTATCAGAAT CGAAAACCAAGGGTGAGGAAGAGACtaaagagaagaaagaagagaagGAT AAGGAAAATTCCAAGGTGGAGGATGCAGAAAAAGACGAATCAACGAACAA AGACTCGGGAAGCGATTCAAAGAAATCGTcgaaagaaaacgaaagtgaaa gtgtaaGCAACAAAGATGACAAGAAGGTCTCAGATGATAAAGACGCAGAA TTAAAGaagcaaaaattaaaagaagCAAATAGCAGAATCACACACGTTCA ACTGGCTGGTCCAAACAGCATGGGATTCGGGTTAGCTCTTAATAATAACA CGTTCCAAAATGCTTTAACCAACAATACAAAGGAGAAATCGAATAAAGAT GGGACGAAGGTGAAAGGAGACAAAGAAGGAAAGGAGGAGACTGGAGTCTT GAAATTGAAAGATGAGGAGAGTAAAACTAACGAGGAAAAAGATGAAGAGA AGAAGCTACGAAAAGACGAAGAGGATGAAGAAATGAAAGAGAAAAAGGTT TCCGAGGATAAGAAACTTGGTTCTGAAACCTCGAAGATGAATAACGAGGA GAGAAAAACTGACGAGGAAAAAGATGAAGAGAAGAAGCTACGAAAAGACG AAGAGGATGAGGAAATGAAAGAGAAAAAGGTTTCCGAGGATAAGAAACTT GGTTCTGAAACCTTGAAGATGAATAATGAGGAGAGAAAAACTGACGAGGA AAAAGATGAAGAGAAGAAGCTACTAAAAGATGAAC

Coding sequence (CDS) from alignment at scaffold_498:109908..114092+

>TCONS_00069331 ID=TCONS_00069331|Name=TCONS_00069331|organism=Clytia hemisphaerica|type=CDS|length=6402bp|location=Sequence derived from alignment at scaffold_498:109908..114092+ (Clytia hemisphaerica)
GACCAGAAGGTCGCTAAAGCATTGGGATTGACAGAAAAAGAGGACCAGAT
AGATGAAGCAGCAAATAAAatagagaaaattaaaaaagcaaTAAGTCGAT
TTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAAGACGCAAAG
GCTAATGGACAAAATACAGACCCGAATAAGGTgcaaaatacagaccagaa
taaagacaaagaaaataacaataaaacaattttcattGACGGGCGTGAAA
GCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGACAAAACAA
CACAAACAAAACAATGGAActcaagaagaaaaaattactgAAAGTTTTAA
AACTGGAACCACTTCTAACAACAAGAAACCAAATGATAATAATGTCCATT
CTAGTATGATTTCCAAAGCTGACGGAACGTTGCCTAAGAAAGCTTTCCAT
AATAATACTAGCAACATAAACGAAAGCAAGGAAAAACAGATTATGGGTAC
AGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGAAAAACAAA
CTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGATAAATCTG
GACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAAGCGTCAGA
AATTTTATATGGTCAACTGTCTAAGATGAATCCTACTCCAGATAGTCCTG
AAGAGAAGGCTTATGGATCTGTCACCAACAAAGCAACACTGAACGCTACT
AACGAACAATTTGCATCACCGGTTCACATCGCAAACGCTCAAAACTTCAC
CGAAGGTGTTAAGGAATCGAATGAACACAAGAGAGTGCAAAGGCAGGCTA
AAAAGCGGACCATTGTAGCCTGGGTTCCAGCTCAAATGAAACATCATGGA
catcaaatgaagaaaaatagaCGTAGTAACATTTTACAGACCACCAGACG
AGAAACAAAGACTTTGGGTGGATTTTTAAGCAAGTTTTTGAAACACAAGA
GAAACAAAATCAGACGTAAAAATGGAAAGAGGAGTTCTGTTCATCATCGA
ATAGCAAAGAAACGAAAAAGAAGCAAAGTTAAGCATTTGaagaataaaag
acattcaaaaGTAGGTGACAATGAAGTAAAGAACGCTGTTGCCACACTAG
AGTCGTTGTTGCTAGAAAAACAAAGACTCGCTAGTCATCAAAAGCCACTC
CGTCATGTCAttgaaagaagaaataaaatacGGACCAGATATGACGATCA
GGATGTATTTTCCAAACCAATTGACCTAACAACAAGTTGGTTTAAACGAG
ACTTAAAAGCCACCAGTGATGACTATTATCCATCTCCACAGATCTACAAA
GCACCTATCCGTGACCAGAACGAAATTCGGAGCCAAATCTCACAGACCTC
AAATaacaaagatgtaaaagcacaGACTAGATCAGCATTCAAAAGCCCCG
AGGAACTTGAAAAAGAGTTGATTGCTAAAGTGAAAAAAGCTAAGAGACTT
TTGAAGGAGAATTTTGTGGATAAAAAGAATAAGACACTGGATGAAGACAC
GAAAGTAGATTCAATACTGTATGataaatatcaaaaacaaaatgtaGCAT
TGACTCGTAAATTAGGTCATATTCTAAACGACTCCAAAGCTGTTGATAAC
GTATTGAATAAACTAGACAACGAAGATGTCAAAAAGGAGGAAGAGTTGAA
CAAGAAATATAAAGTGATTACCACAACTGCTGACGATATCTATTCTAAAG
ATAAAGAGATTCTAGAAGAACAGCTTGACCGTGCCAATAGTACAGCTATT
GATGATTTAAGAAGAGATAAGACAGACCTGGCGAATAACGGTGATGGAGG
ATACATTGATGAGGAGCCTGTTGCAAGGGATTCAGCCCCGAGGAGTGGAT
TTGCGTCCAGAAATACAACCCAAGATGAAGATCCACATTCAAAATTAGGA
TTCAAAGCTAGATCTTATAAGAATTCTTCCAGTGTTGAGACGGTTGATTA
TGCACGAAATTCAACCACATCAGTTCCGGATCACGCCAAAGCTGAATCTG
AACTTCATAGTATGATCGATTTAACGACTTCGACTGATTTAAAGAATGCT
GTATCTCCTTATGAGAGATCTAATACGACCAGTACGGAACAAACAGCTAA
TGAAAATACTGAAGAACCAGAAACAGATGATTCTATATATCCAGAAGCGC
CAGTAACAAAAACGTCCAAAATAATTGATGAGGATAATGGGAGTGGTCAG
ATTCCCAAAGGATTTGCTTCGCCTGGAAATGATGATAAGATGGAATTAAA
TTCAGATGAGAAATCTTTGACGAATTCAAACCCAGAAGATTATTATTTAG
CATATGAAAAAGCAGAATATGGCAATGCTGCAGATAAAAATATCAAGGAA
GATAAGGATGTGAAAACTTTGGCAAAACCAGGCAAAGATGGAGATTCGGA
TGCGAAGTTATCAGAATCGAAAACCAAGGGTGAGGAAGAGACtaaagaga
agaaagaagagaagGATAAGGAAAATTCCAAGGTGGAGGATGCAGAAAAA
GACGAATCAACGAACAAAGACTCGGGAAGCGATTCAAAGAAATCGTcgaa
agaaaacgaaagtgaaagtgtaaGCAACAAAGATGACAAGAAGGTCTCAG
ATGATAAAGACGCAGAATTAAAGaagcaaaaattaaaagaagCAAATAGC
AGAATCACACACGTTCAACTGGCTGGTCCAAACAGCATGGGATTCGGGTT
AGCTCTTAATAATAACACGTTCCAAAATGCTTTAACCAACAATACAAAGG
AGAAATCGAATAAAGATGGGACGAAGGTGAAAGGAGACAAAGAAGGAAAG
GAGGAGACTGGAGTCTTGAAATTGAAAGATGAGGAGAGTAAAACTAACGA
GGAAAAAGATGAAGAGAAGAAGCTACGAAAAGACGAAGAGGATGAAGAAA
TGAAAGAGAAAAAGGTTTCCGAGGATAAGAAACTTGGTTCTGAAACCTCG
AAGATGAATAACGAGGAGAGAAAAACTGACGAGGAAAAAGATGAAGAGAA
GAAGCTACGAAAAGACGAAGAGGATGAGGAAATGAAAGAGAAAAAGGTTT
CCGAGGATAAGAAACTTGGTTCTGAAACCTTGAAGATGAATAATGAGGAG
AGAAAAACTGACGAGGAAAAAGATGAAGAGAAGAAGCTACTAAAAGATGA
AGACCAGAAGGTCGCTAAAGCATTGGGATTGACAGAAAAAGAGGACCAGA
TAGATGAAGCAGCAAATAAAatagagaaaattaaaaaagcaaTAAGTCGA
TTTGTTGAAAGTTCGAATCCTATTGAAGTCGATACTGATAAAGACGCAAA
GGCTAATGGACAAAATACAGACCCGAATAAGGTgcaaaatacagaccaga
ataaagacaaagaaaataacaataaaacaattttcattGACGGGCGTGAA
AGCGCTAATGGTGATAAAGATAAAACTTTTAAGGAAGATTCGACAAAACA
ACACAAACAAAACAATGGAActcaagaagaaaaaattactgAAAGTTTTA
AAACTGGAACCACTTCTAACAACAAGAAACCAAATGATAATAATGTCCAT
TCTAGTATGATTTCCAAAGCTGACGGAACGTTGCCTAAGAAAGCTTTCCA
TAATAATACTAGCAACATAAACGAAAGCAAGGAAAAACAGATTATGGGTA
CAGCAAAACTAGCTAATGATAGTAGAAATGTGAATACCGATGAAAAACAA
ACTGCTTCCCCGAAAGAAGTGACGAATGCTGAAATGCCTGCGATAAATCT
GGACGAATTATCGATCGATCGGGAGTTAGAGCAAGTACAAAAAGCGTCAG
AAATTTTATATGGTCAACTGTCTAAGATGAATCCTACTCCAGATAGTCCT
GAAGAGAAGGCTTATGGATCTGTCACCAACAAAGCAACACTGAACGCTAC
TAACGAACAATTTGCATCACCGGTTCACATCGCAAACGCTCAAAACTTCA
CCGAAGGTGTTAAGGAATCGAATGAACACAAGAGAGTGCAAAGGCAGGCT
AAAAAGCGGACCATTGTAGCCTGGGTTCCAGCTCAAATGAAACATCATGG
AcatcaaatgaagaaaaatagaCGTAGTAACATTTTACAGACCACCAGAC
GAGAAACAAAGACTTTGGGTGGATTTTTAAGCAAGTTTTTGAAACACAAG
AGAAACAAAATCAGACGTAAAAATGGAAAGAGGAGTTCTGTTCATCATCG
AATAGCAAAGAAACGAAAAAGAAGCAAAGTTAAGCATTTGaagaataaaa
gacattcaaaaGTAGGTGACAATGAAGTAAAGAACGCTGTTGCCACACTA
GAGTCGTTGTTGCTAGAAAAACAAAGACTCGCTAGTCATCAAAAGCCACT
CCGTCATGTCAttgaaagaagaaataaaatacGGACCAGATATGACGATC
AGGATGTATTTTCCAAACCAATTGACCTAACAACAAGTTGGTTTAAACGA
GACTTAAAAGCCACCAGTGATGACTATTATCCATCTCCACAGATCTACAA
AGCACCTATCCGTGACCAGAACGAAATTCGGAGCCAAATCTCACAGACCT
CAAATaacaaagatgtaaaagcacaGACTAGATCAGCATTCAAAAGCCCC
GAGGAACTTGAAAAAGAGTTGATTGCTAAAGTGAAAAAAGCTAAGAGACT
TTTGAAGGAGAATTTTGTGGATAAAAAGAATAAGACACTGGATGAAGACA
CGAAAGTAGATTCAATACTGTATGataaatatcaaaaacaaaatgtaGCA
TTGACTCGTAAATTAGGTCATATTCTAAACGACTCCAAAGCTGTTGATAA
CGTATTGAATAAACTAGACAACGAAGATGTCAAAAAGGAGGAAGAGTTGA
ACAAGAAATATAAAGTGATTACCACAACTGCTGACGATATCTATTCTAAA
GATAAAGAGATTCTAGAAGAACAGCTTGACCGTGCCAATAGTACAGCTAT
TGATGATTTAAGAAGAGATAAGACAGACCTGGCGAATAACGGTGATGGAG
GATACATTGATGAGGAGCCTGTTGCAAGGGATTCAGCCCCGAGGAGTGGA
TTTGCGTCCAGAAATACAACCCAAGATGAAGATCCACATTCAAAATTAGG
ATTCAAAGCTAGATCTTATAAGAATTCTTCCAGTGTTGAGACGGTTGATT
ATGCACGAAATTCAACCACATCAGTTCCGGATCACGCCAAAGCTGAATCT
GAACTTCATAGTATGATCGATTTAACGACTTCGACTGATTTAAAGAATGC
TGTATCTCCTTATGAGAGATCTAATACGACCAGTACGGAACAAACAGCTA
ATGAAAATACTGAAGAACCAGAAACAGATGATTCTATATATCCAGAAGCG
CCAGTAACAAAAACGTCCAAAATAATTGATGAGGATAATGGGAGTGGTCA
GATTCCCAAAGGATTTGCTTCGCCTGGAAATGATGATAAGATGGAATTAA
ATTCAGATGAGAAATCTTTGACGAATTCAAACCCAGAAGATTATTATTTA
GCATATGAAAAAGCAGAATATGGCAATGCTGCAGATAAAAATATCAAGGA
AGATAAGGATGTGAAAACTTTGGCAAAACCAGGCAAAGATGGAGATTCGG
ATGCGAAGTTATCAGAATCGAAAACCAAGGGTGAGGAAGAGACtaaagag
aagaaagaagagaagGATAAGGAAAATTCCAAGGTGGAGGATGCAGAAAA
AGACGAATCAACGAACAAAGACTCGGGAAGCGATTCAAAGAAATCGTcga
aagaaaacgaaagtgaaagtgtaaGCAACAAAGATGACAAGAAGGTCTCA
GATGATAAAGACGCAGAATTAAAGaagcaaaaattaaaagaagCAAATAG
CAGAATCACACACGTTCAACTGGCTGGTCCAAACAGCATGGGATTCGGGT
TAGCTCTTAATAATAACACGTTCCAAAATGCTTTAACCAACAATACAAAG
GAGAAATCGAATAAAGATGGGACGAAGGTGAAAGGAGACAAAGAAGGAAA
GGAGGAGACTGGAGTCTTGAAATTGAAAGATGAGGAGAGTAAAACTAACG
AGGAAAAAGATGAAGAGAAGAAGCTACGAAAAGACGAAGAGGATGAAGAA
ATGAAAGAGAAAAAGGTTTCCGAGGATAAGAAACTTGGTTCTGAAACCTC
GAAGATGAATAACGAGGAGAGAAAAACTGACGAGGAAAAAGATGAAGAGA
AGAAGCTACGAAAAGACGAAGAGGATGAGGAAATGAAAGAGAAAAAGGTT
TCCGAGGATAAGAAACTTGGTTCTGAAACCTTGAAGATGAATAATGAGGA
GAGAAAAACTGACGAGGAAAAAGATGAAGAGAAGAAGCTACTAAAAGATG
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043206XLOC_043206Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069331-proteinTCONS_00069331-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069331-exon-scaffold_498-1491911889:109908..110617TCONS_00069331-exon-scaffold_498-1491911889:109908..110617Clytia hemisphaericaexon
TCONS_00069331-exon-scaffold_498-1510915933:109908..110617TCONS_00069331-exon-scaffold_498-1510915933:109908..110617Clytia hemisphaericaexon
TCONS_00069331-exon-scaffold_498-1575043694:109908..110617TCONS_00069331-exon-scaffold_498-1575043694:109908..110617Clytia hemisphaericaexon
TCONS_00069331-exon-scaffold_498-1491911889:111599..114092TCONS_00069331-exon-scaffold_498-1491911889:111599..114092Clytia hemisphaericaexon
TCONS_00069331-exon-scaffold_498-1510915933:111599..114092TCONS_00069331-exon-scaffold_498-1510915933:111599..114092Clytia hemisphaericaexon
TCONS_00069331-exon-scaffold_498-1575043694:111599..114092TCONS_00069331-exon-scaffold_498-1575043694:111599..114092Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:109908..114092 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0134123 0 0.0638981 0.088363 1.44312 1.76438 0.440092 0.396927 0 0.523537 0.745976 1.05085 0.304078 1.52335 0.699803 0.846784 0 0 0.544367 0.697393 0.240596 0.709404 1.59315 1.82439 0.113699 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069331 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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