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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069119 ID=TCONS_00069119|Name=TCONS_00069119|organism=Clytia hemisphaerica|type=transcript|length=1462bp
ATTTAACTACAAGTGGTTTAAAAGATCgcaaaattacgcatgcgtataag
tctctatttgggtgaactggaaacattagatgaactaactcTAGCGCCGG
AGCAGATACTCAGCAGCGCTGGGTATGTAATCAGGGAAGGTCAGTACTAC
GAATGGATTTACGAATTCATCACGTGACCAGTGTCCCTCAAACGTATCCT
TTTTCTTCAATGTCAAAGCCTTATTGGAGATATTTGAGATTAGGAAAGGC
CAGTCTGGAGATAAGCAATGGATGCCCGGGACAAAGCATGCAGGTTACTG
TAAGGGTTAGGGGGTGTGTCGCAGACGCTCAAAAAGCAACGAGGAGACTT
TCTTTATCTCGTAAACATACAAAAACTCCCAAATTTAAGTGAAGAGAAAG
GatgaaaaataggctaaaattgATTTCTAATGCGCAATGTATTTCCTTTC
AAACAATCAGGATATCATCATTATTCTCTCCGTCCATTAAAAAttgatct
tatcggagtttttgatttttctaaaacagcaatgcattgtgggattttTT
CGGGGGTATTACAATAGAATTCCCTTGAGGAATTCCTGAGAGATTGTTAT
TGTAATACCCCCGAAACAACCCCACAATGCATCGTTTTTTTAACTGCATG
CGGGTCGCGACGTCCTTCATCTTCACTTTCGCTATCCTCTTCAACACCGT
TCCCTTCGACACCACTTTCACTTTCAGTATCAATTTCATCGTCTGTCTCA
TATTGCGATTCACTATCAGTGTAATACGAATTTTCACGTTCGTAACTTTC
ATCACAAAAATCTTCGTGGTTTACTTCGTCCTCGAACTCCTTCTCCTGGA
TAGAATACAATTCCAGTTGACTCAACCGTATCGTAGTCCCATCCAACGTC
TGATTCCCATGGAAGTTCACCCGTCAGATTCCCAAAGGTCCTGCTTTTGA
ACTTTCTTAACTTGCCACATTTTGAAGGTGTCTGAGAAATAAGCTAAAAG
AGCGAGAAAGATCAGAATTGATACTCCTAAAATTgataattgaaaaattg
ataaattcttGTTTTAAGTATAGTTCATTAcgatttgagaaaaattgagT
ACCACTACCTTTTCCTTCGGGGACACTTTTTGATTGTTCAACCCTTGAAC
cgactacatgtttttttgtaagcatacaaaaatttgaaaacaggctCAGG
GGTGCTTAGGTCGAGGCTTGACAAGTCTGAAAAATGCTTATAAGGATGCT
TATATCCcaagaaaaattccaaaaatccgTAAAATCCCAGCTAAGATCag
gaaaattcatttttcgtaggctcttAAATGTAATACTTAGcacatgttta
aatttttccatgagtctagatatgcttataagtgtaaagcttataaaaga
aaaaacatgtatcaagTTTCACTTTTTCCTCACCTTTTTTTCGAAGCCTT
CTTCTATTCGTT Run BLAST on NCBI transcript from alignment at scaffold_493:153286..154747 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069119 ID=TCONS_00069119|Name=TCONS_00069119|organism=Clytia hemisphaerica|type=transcript|length=1462bp|location=Sequence derived from alignment at scaffold_493:153286..154747 (Clytia hemisphaerica)
AACGAATAGAAGAAGGCTTCGAAAAAAAGGTGAGGAAAAAGTGAAActtg
atacatgttttttcttttataagctttacacttataagcatatctagact
catggaaaaatttaaacatgtgCTAAGTATTACATTTaagagcctacgaa
aaatgaattttcctGATCTTAGCTGGGATTTTAcggatttttggaatttt
tcttgGGATATAAGCATCCTTATAAGCATTTTTCAGACTTGTCAAGCCTC
GACCTAAGCACCCCTGagcctgttttcaaatttttgtatgcttacaaaaa
aacatgtagtcgGTTCAAGGGTTGAACAATCAAAAAGTGTCCCCGAAGGA
AAAGGTAGTGGTActcaatttttctcaaatcgTAATGAACTATACTTAAA
ACaagaatttatcaatttttcaattatcAATTTTAGGAGTATCAATTCTG
ATCTTTCTCGCTCTTTTAGCTTATTTCTCAGACACCTTCAAAATGTGGCA
AGTTAAGAAAGTTCAAAAGCAGGACCTTTGGGAATCTGACGGGTGAACTT
CCATGGGAATCAGACGTTGGATGGGACTACGATACGGTTGAGTCAACTGG
AATTGTATTCTATCCAGGAGAAGGAGTTCGAGGACGAAGTAAACCACGAA
GATTTTTGTGATGAAAGTTACGAACGTGAAAATTCGTATTACACTGATAG
TGAATCGCAATATGAGACAGACGATGAAATTGATACTGAAAGTGAAAGTG
GTGTCGAAGGGAACGGTGTTGAAGAGGATAGCGAAAGTGAAGATGAAGGA
CGTCGCGACCCGCATGCAGTTAAAAAAACGATGCATTGTGGGGTTGTTTC
GGGGGTATTACAATAACAATCTCTCAGGAATTCCTCAAGGGAATTCTATT
GTAATACCCCCGAAaaaatcccacaatgcattgctgttttagaaaaatca
aaaactccgataagatcaaTTTTTAATGGACGGAGAGAATAATGATGATA
TCCTGATTGTTTGAAAGGAAATACATTGCGCATTAGAAATcaattttagc
ctatttttcatCCTTTCTCTTCACTTAAATTTGGGAGTTTTTGTATGTTT
ACGAGATAAAGAAAGTCTCCTCGTTGCTTTTTGAGCGTCTGCGACACACC
CCCTAACCCTTACAGTAACCTGCATGCTTTGTCCCGGGCATCCATTGCTT
ATCTCCAGACTGGCCTTTCCTAATCTCAAATATCTCCAATAAGGCTTTGA
CATTGAAGAAAAAGGATACGTTTGAGGGACACTGGTCACGTGATGAATTC
GTAAATCCATTCGTAGTACTGACCTTCCCTGATTACATACCCAGCGCTGC
TGAGTATCTGCTCCGGCGCTAgagttagttcatctaatgtttccagttca
cccaaatagagacttatacgcatgcgtaattttgcGATCTTTTAAACCAC
TTGTAGTTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069119-exon-scaffold_493-1491911889:153286..154747 | TCONS_00069119-exon-scaffold_493-1491911889:153286..154747 | Clytia hemisphaerica | exon |
| TCONS_00069119-exon-scaffold_493-1510915933:153286..154747 | TCONS_00069119-exon-scaffold_493-1510915933:153286..154747 | Clytia hemisphaerica | exon |
| TCONS_00069119-exon-scaffold_493-1575043694:153286..154747 | TCONS_00069119-exon-scaffold_493-1575043694:153286..154747 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:153286..154747 . |
Blast
The following BLAST results are available for this feature:
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