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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068473 ID=TCONS_00068473|Name=TCONS_00068473|organism=Clytia hemisphaerica|type=transcript|length=887bp
AGGGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGTT
ACATCAAAAAACATAAAGTTCCTCTACACAAATACATCGAACAATTTGAA
GCATGCAGAGAAAGTGTTTTGGGAATGAAAATCAATTCCTTTACTGAATA
TGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAAGATTCGGG
TCGAATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGAC
AAtcgaaaaatcaacaaaaacacatTCAGCTATTTTGATAAAGTTGACGA
ATTTGAATTAAATGAAATCATCTCACTGCTTTGTCAATATTCATTGGTCA
ACGAGCGGAATGATTGTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATC
CGATATCGTATTGAACAAAATCAATTTGTCGAGGGTGAATGTCCGTTGAC
ACTGCTTGAAGttgttcttttgaaaatagaggtttcttttaaagatttgt
tTGCAAATGGTGACCACGAGGATTTATGGTACATTCATGTTTTTCGTTTG
ATCATGAGTGGTGCATTCAAAGGAATCAACTTTGATGTTAACCAGGTGTT
AAATATCGCCGTAGGTAGAATGGAGATGGAGAATTTATACCTACTTACTG
AActtctttcaaaagatttgtTAGAACAATATAGGTTGTCTCGAGCTGTG
GAAACTTTTCACGGTTTATTGCTTGTTTATCGTCGTTTCATGGACGCGTC
AATTCAATTAGGTTTACGTAATTTGGATGagatttttgcttttgaagAAG
AGTTTTCCTTAGAGCTTGAAGAAAATTCTGTGGAAGTTTACTTGTGGAAG
CTGAAGCAAGCTGAGGTATATAATATGCATGGACGAG Run BLAST on NCBI transcript from alignment at scaffold_485:100864..101750+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068473 ID=TCONS_00068473|Name=TCONS_00068473|organism=Clytia hemisphaerica|type=transcript|length=887bp|location=Sequence derived from alignment at scaffold_485:100864..101750+ (Clytia hemisphaerica)
AGGGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGTT
ACATCAAAAAACATAAAGTTCCTCTACACAAATACATCGAACAATTTGAA
GCATGCAGAGAAAGTGTTTTGGGAATGAAAATCAATTCCTTTACTGAATA
TGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAAGATTCGGG
TCGAATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGAC
AAtcgaaaaatcaacaaaaacacatTCAGCTATTTTGATAAAGTTGACGA
ATTTGAATTAAATGAAATCATCTCACTGCTTTGTCAATATTCATTGGTCA
ACGAGCGGAATGATTGTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATC
CGATATCGTATTGAACAAAATCAATTTGTCGAGGGTGAATGTCCGTTGAC
ACTGCTTGAAGttgttcttttgaaaatagaggtttcttttaaagatttgt
tTGCAAATGGTGACCACGAGGATTTATGGTACATTCATGTTTTTCGTTTG
ATCATGAGTGGTGCATTCAAAGGAATCAACTTTGATGTTAACCAGGTGTT
AAATATCGCCGTAGGTAGAATGGAGATGGAGAATTTATACCTACTTACTG
AActtctttcaaaagatttgtTAGAACAATATAGGTTGTCTCGAGCTGTG
GAAACTTTTCACGGTTTATTGCTTGTTTATCGTCGTTTCATGGACGCGTC
AATTCAATTAGGTTTACGTAATTTGGATGagatttttgcttttgaagAAG
AGTTTTCCTTAGAGCTTGAAGAAAATTCTGTGGAAGTTTACTTGTGGAAG
CTGAAGCAAGCTGAGGTATATAATATGCATGGACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068473-exon-scaffold_485-1491911889:100864..101750 | TCONS_00068473-exon-scaffold_485-1491911889:100864..101750 | Clytia hemisphaerica | exon |
| TCONS_00068473-exon-scaffold_485-1510915933:100864..101750 | TCONS_00068473-exon-scaffold_485-1510915933:100864..101750 | Clytia hemisphaerica | exon |
| TCONS_00068473-exon-scaffold_485-1575043694:100864..101750 | TCONS_00068473-exon-scaffold_485-1575043694:100864..101750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:100864..101750 + |
Blast
The following BLAST results are available for this feature:
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