TCONS_00068130 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068130
Unique NameTCONS_00068130
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068130 ID=TCONS_00068130|Name=TCONS_00068130|organism=Clytia hemisphaerica|type=transcript|length=180bp
GTGAAATTTGAAGTAATTTTTACTGGGTCGAGTCCGTACCAAGACCGTCA
AGAAGGCTGCCAGAGTCATCATCGAGAAATACTACACTCGACTTACTCAT
GNACCAAGCGTtacaccagcagcaaaaatatcataaactagactgtgaaa
aaagtttaacgcttggattcccaggctaat
Run BLAST on NCBI

transcript from alignment at scaffold_48:326069..326411+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068130 ID=TCONS_00068130|Name=TCONS_00068130|organism=Clytia hemisphaerica|type=transcript|length=343bp|location=Sequence derived from alignment at scaffold_48:326069..326411+ (Clytia hemisphaerica)
GTGAAATTTGAAGTAATTTTTACTGGTTAGACGAATTTTAAGCGACTAAT
ATCTTAGCAATCACTTTAAGCTTATCGTTGCCGATGAGTAATCTCTTTCG
ATAGTATTTGGAATACTTGCTAATGTCGATATTTCTtgagaaattttatt
tcaaccgaagaattttcaattatttgttGATCTTGTAGGGTCGAGTCCGT
ACCAAGACCGTCAAGAAGGCTGCCAGAGTCATCATCGAGAAATACTACAC
TCGACTTACTCATGNACCAAGCGTtacaccagcagcaaaaatatcataaa
ctagactgtgaaaaaagtttaacgcttggattcccaggctaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042528XLOC_042528Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068130-exon-scaffold_48-1491911889:326069..326093TCONS_00068130-exon-scaffold_48-1491911889:326069..326093Clytia hemisphaericaexon
TCONS_00068130-exon-scaffold_48-1510915933:326069..326093TCONS_00068130-exon-scaffold_48-1510915933:326069..326093Clytia hemisphaericaexon
TCONS_00068130-exon-scaffold_48-1575043694:326069..326093TCONS_00068130-exon-scaffold_48-1575043694:326069..326093Clytia hemisphaericaexon
TCONS_00068130-exon-scaffold_48-1491911889:326257..326411TCONS_00068130-exon-scaffold_48-1491911889:326257..326411Clytia hemisphaericaexon
TCONS_00068130-exon-scaffold_48-1510915933:326257..326411TCONS_00068130-exon-scaffold_48-1510915933:326257..326411Clytia hemisphaericaexon
TCONS_00068130-exon-scaffold_48-1575043694:326257..326411TCONS_00068130-exon-scaffold_48-1575043694:326257..326411Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:326069..326411 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068130 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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