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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068064 ID=TCONS_00068064|Name=TCONS_00068064|organism=Clytia hemisphaerica|type=transcript|length=1368bp
GTTAATCATCCATTGTTTCGTTACAGACATAATAATAATTGATAACAAAT
AATAACAGCTGTGGAGGAGCTTTAATTTATGTGAATGAATGAACTGTACA
TTTACCTGTTGTGTTAATTCGTGTTAAGACTTACTGACAATAACTGATGA
TACTGATCGTGACAGTGAACTAACAATTGGTGAAGACCACCGCACCCTGA
AGAAAGGttatcttcttcatttttacatGGTAGCAGAGGAACAATGGCAT
CTACATCTTACAACAAAGCTCCTCCTTTGCTATCGTCCAGTAAAACATAT
AGTGATTggaagaaactaatcaatataTGGACGGAGCTCACAACCCTTGA
GAAGAAGAAACAAGGTCCAGCATTGGTATTGACCCTTGAAGGAAAAGCGC
AAGAAGCAGCCCTTGAATTGTCACAAGAGGAAATTACTGGCGAAAATGGG
GTTAAACAAATCTTGACAAGGCTTGACAAGATTTATGAAAAAGACAAACT
TACAGAGAAGTTCAACGCAATTGAAAAATTCGAGGGATACAAACGTGTCA
AGGAAAGCACCATTCGTGAATTCCTTGTTGAATTTGACAAACGACTACAC
AAGATAAAGAACTACATCCAATATCCTCAAGATCTCCTTGCCTATCGCCT
ACTCAAAACTGCTAACCTCGAACCAACACATGAAAAGTTAATCAAAGCAA
CCATCACAGATTTGAATTATGAAGATGTCagaaacaaacttgtaaaagtg
TTTGCTGATGACTCAATCTCTGGCTTAGAAAGTGATTTTGCAGGAGTAAA
GGTCAAGAGCGAGCCAACATTTTATGGAAGAGAAAGCGAAGGAGAAAACA
CttctgaagaagaagaaaataccTTCTATACTAGAAACCGCCAGACCTAT
AAAAATAAGCCAAGAGGAGGAACCATTCGAAAAACCAACTATCGGATTGA
ACAATCAAGTAAGCCTGATAGAAGAAATGTTcatgaaaaagctaaaaacC
CATTAGATCGGTTTGGTCGAGTGTCAAGATGTTCAATTTGNGCCATTCGA
AAAACGAACTATCGGATTGAACAATCAAGTAAGCCTGATAGAAGAAATGC
TcatgaaaaagctaaaaacCCATTAGATCGGTTTGGTCGAGTGTCAAGAT
GTTCAATTTGTGATAGCATCAACCACTGGCAACAAGAATGCCCAGATGGC
AACTCCACAAATAATGAAACCTATGTTGTCCATGAGATTATCCTTCACAA
TGTGGATGATTCTGAAGTTAATCTACGTAACCTGGTGTCAGAAACATGGA
ACTGTGGATTGTTAGACTGTGGTGCAAGCAAAACTGTATGTGGAGAAGTA
TGGCTAAAACAATATCTA Run BLAST on NCBI protein sequence of TCONS_00068064-protein >TCONS_00068064-protein ID=TCONS_00068064-protein|Name=TCONS_00068064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=375bp
MASTSYNKAPPLLSSSKTYSDWKKLINIWTELTTLEKKKQGPALVLTLEG
KAQEAALELSQEEITGENGVKQILTRLDKIYEKDKLTEKFNAIEKFEGYK
RVKESTIREFLVEFDKRLHKIKNYIQYPQDLLAYRLLKTANLEPTHEKLI
KATITDLNYEDVRNKLVKVFADDSISGLESDFAGVKVKSEPTFYGRESEG
ENTSEEEENTFYTRNRQTYKNKPRGGTIRKTNYRIEQSSKPDRRNVHEKA
KNPLDRFGRVSRCSIXAIRKTNYRIEQSSKPDRRNAHEKAKNPLDRFGRV
SRCSICDSINHWQQECPDGNSTNNETYVVHEIILHNVDDSEVNLRNLVSE
TWNCGLLDCGASKTVCGEVWLKQYL Run BLAST on NCBI transcript from alignment at scaffold_478:268612..269979 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068064 ID=TCONS_00068064|Name=TCONS_00068064|organism=Clytia hemisphaerica|type=transcript|length=1368bp|location=Sequence derived from alignment at scaffold_478:268612..269979 (Clytia hemisphaerica)
TAGATATTGTTTTAGCCATACTTCTCCACATACAGTTTTGCTTGCACCAC
AGTCTAACAATCCACAGTTCCATGTTTCTGACACCAGGTTACGTAGATTA
ACTTCAGAATCATCCACATTGTGAAGGATAATCTCATGGACAACATAGGT
TTCATTATTTGTGGAGTTGCCATCTGGGCATTCTTGTTGCCAGTGGTTGA
TGCTATCACAAATTGAACATCTTGACACTCGACCAAACCGATCTAATGGg
tttttagctttttcatgAGCATTTCTTCTATCAGGCTTACTTGATTGTTC
AATCCGATAGTTCGTTTTTCGAATGGCNCAAATTGAACATCTTGACACTC
GACCAAACCGATCTAATGGgtttttagctttttcatgAACATTTCTTCTA
TCAGGCTTACTTGATTGTTCAATCCGATAGTTGGTTTTTCGAATGGTTCC
TCCTCTTGGCTTATTTTTATAGGTCTGGCGGTTTCTAGTATAGAAggtat
tttcttcttcttcagaaGTGTTTTCTCCTTCGCTTTCTCTTCCATAAAAT
GTTGGCTCGCTCTTGACCTTTACTCCTGCAAAATCACTTTCTAAGCCAGA
GATTGAGTCATCAGCAAAcacttttacaagtttgtttctGACATCTTCAT
AATTCAAATCTGTGATGGTTGCTTTGATTAACTTTTCATGTGTTGGTTCG
AGGTTAGCAGTTTTGAGTAGGCGATAGGCAAGGAGATCTTGAGGATATTG
GATGTAGTTCTTTATCTTGTGTAGTCGTTTGTCAAATTCAACAAGGAATT
CACGAATGGTGCTTTCCTTGACACGTTTGTATCCCTCGAATTTTTCAATT
GCGTTGAACTTCTCTGTAAGTTTGTCTTTTTCATAAATCTTGTCAAGCCT
TGTCAAGATTTGTTTAACCCCATTTTCGCCAGTAATTTCCTCTTGTGACA
ATTCAAGGGCTGCTTCTTGCGCTTTTCCTTCAAGGGTCAATACCAATGCT
GGACCTTGTTTCTTCTTCTCAAGGGTTGTGAGCTCCGTCCAtatattgat
tagtttcttccAATCACTATATGTTTTACTGGACGATAGCAAAGGAGGAG
CTTTGTTGTAAGATGTAGATGCCATTGTTCCTCTGCTACCatgtaaaaat
gaagaagataaCCTTTCTTCAGGGTGCGGTGGTCTTCACCAATTGTTAGT
TCACTGTCACGATCAGTATCATCAGTTATTGTCAGTAAGTCTTAACACGA
ATTAACACAACAGGTAAATGTACAGTTCATTCATTCACATAAATTAAAGC
TCCTCCACAGCTGTTATTATTTGTTATCAATTATTATTATGTCTGTAACG
AAACAATGGATGATTAAC Coding sequence (CDS) from alignment at scaffold_478:268612..269979 >TCONS_00068064 ID=TCONS_00068064|Name=TCONS_00068064|organism=Clytia hemisphaerica|type=CDS|length=1125bp|location=Sequence derived from alignment at scaffold_478:268612..269979 (Clytia hemisphaerica)
TAGATATTGTTTTAGCCATACTTCTCCACATACAGTTTTGCTTGCACCAC
AGTCTAACAATCCACAGTTCCATGTTTCTGACACCAGGTTACGTAGATTA
ACTTCAGAATCATCCACATTGTGAAGGATAATCTCATGGACAACATAGGT
TTCATTATTTGTGGAGTTGCCATCTGGGCATTCTTGTTGCCAGTGGTTGA
TGCTATCACAAATTGAACATCTTGACACTCGACCAAACCGATCTAATGGg
tttttagctttttcatgAGCATTTCTTCTATCAGGCTTACTTGATTGTTC
AATCCGATAGTTCGTTTTTCGAATGGCNCAAATTGAACATCTTGACACTC
GACCAAACCGATCTAATGGgtttttagctttttcatgAACATTTCTTCTA
TCAGGCTTACTTGATTGTTCAATCCGATAGTTGGTTTTTCGAATGGTTCC
TCCTCTTGGCTTATTTTTATAGGTCTGGCGGTTTCTAGTATAGAAggtat
tttcttcttcttcagaaGTGTTTTCTCCTTCGCTTTCTCTTCCATAAAAT
GTTGGCTCGCTCTTGACCTTTACTCCTGCAAAATCACTTTCTAAGCCAGA
GATTGAGTCATCAGCAAAcacttttacaagtttgtttctGACATCTTCAT
AATTCAAATCTGTGATGGTTGCTTTGATTAACTTTTCATGTGTTGGTTCG
AGGTTAGCAGTTTTGAGTAGGCGATAGGCAAGGAGATCTTGAGGATATTG
GATGTAGTTCTTTATCTTGTGTAGTCGTTTGTCAAATTCAACAAGGAATT
CACGAATGGTGCTTTCCTTGACACGTTTGTATCCCTCGAATTTTTCAATT
GCGTTGAACTTCTCTGTAAGTTTGTCTTTTTCATAAATCTTGTCAAGCCT
TGTCAAGATTTGTTTAACCCCATTTTCGCCAGTAATTTCCTCTTGTGACA
ATTCAAGGGCTGCTTCTTGCGCTTTTCCTTCAAGGGTCAATACCAATGCT
GGACCTTGTTTCTTCTTCTCAAGGGTTGTGAGCTCCGTCCAtatattgat
tagtttcttccAATCACTATATGTTTTACTGGACGATAGCAAAGGAGGAG
CTTTGTTGTAAGATGTAGATGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068064-exon-scaffold_478-1491911889:268612..269979 | TCONS_00068064-exon-scaffold_478-1491911889:268612..269979 | Clytia hemisphaerica | exon |
| TCONS_00068064-exon-scaffold_478-1510915933:268612..269979 | TCONS_00068064-exon-scaffold_478-1510915933:268612..269979 | Clytia hemisphaerica | exon |
| TCONS_00068064-exon-scaffold_478-1575043694:268612..269979 | TCONS_00068064-exon-scaffold_478-1575043694:268612..269979 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_478 | supercontig | scaffold_478:268612..269979 . |
Blast
The following BLAST results are available for this feature:
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