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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067743 ID=TCONS_00067743|Name=TCONS_00067743|organism=Clytia hemisphaerica|type=transcript|length=1251bp
ATTCAAAAGCTCTAATGGCTATAATGGtatgaataaattttaaatacaAA
CATAAAATTAGGTATCATGAAATTTTCACATATATGTTACAATTTCAATG
TTTGACTTTATGGTTTTATCTGCATACCTTCAAATTTTTCTCGAGATATA
TTCATTTGGAACACAAAAAGTCAGAAGGAAAACAGTCAACAAAGGTATAA
AAAATGGCAAACGAGGACATTTGGAGATACCTCAGCCCAACTATTGGTAC
ATTGGCTATACTTGCGAACATGGTTCAAATCGTTCTTATCAATAGAAGAA
AAAAGAGAGTGCCAGCTTCcttgatctttattttgaactTATCAATATCC
GACTTATTCGTTGGTATTTGCATTATTGTGACCAagacaatgtttttcat
tgcattggaaaataaagaacttttcagaAATAAGCCTTACACTATGGCAA
TGGACCTTTTGATATATGTTTTCTTTCGAATGTCATTATTCATCTCTATT
TTCAATGTCGTTGCAATCACTATAGATCGCCTGGTGATCGTCGTTAGCCC
TTTACGATACAGAAGTGCTGAAAGACGCCGAATATTGATCGTGGTTGCTA
TTCTTATGTGGATTGTTGCTTTAACGATAGCTTTCTTCTCTTGGTATTAC
CGTAAATCTAAACAAAAGATTTATCGCGAGGAGCTGGTATTTCCTGTTTT
GATCCTGCCAACTGTCATTTTGTTATTCAACTGTTATTTGTTCATTTGGA
GAGcaacaaagaaacaaaacagaaaatttaaaacattgcAATCACCAGCG
ACTACACGAAAACCAAGAGGTGTTTCAGTAGATTCCACGTCTTCAATATC
GTCGCCACAACAACAGAATCAGTTGCTTATCCGAAGTCGCCAACAGAAAC
GGTTGATTGTGCTAGCTTTTACTGTTGTGATGGCTTTTACAGTGTGTTGG
GTACCTTTATCAATATATTCACTGTTGAAAGCTCTGGGACACGCTGTTAA
GAGAAGAGAACTGGAGAATATATTTTTCATCATCGCAATCTCGAATTCTC
TGTTAGACCCTTTGATTTACATCAATTTTGACCGACGAAAGTTGTTTCAA
AGGATTAAACGAACTTTGACTAGGAGTAGGAGTGCACAACAAACTGCGGT
TgtgtagattttcaaaaaagtcaaaatattaggTATATTTCTTTTTAAAC
TATAAAAATTATGCATATTAAGATTCCTTGGTGGAACTACCTCGCAGTTA
C Run BLAST on NCBI protein sequence of TCONS_00067743-protein >TCONS_00067743-protein ID=TCONS_00067743-protein|Name=TCONS_00067743-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MANEDIWRYLSPTIGTLAILANMVQIVLINRRKKRVPASLIFILNLSISD
LFVGICIIVTKTMFFIALENKELFRNKPYTMAMDLLIYVFFRMSLFISIF
NVVAITIDRLVIVVSPLRYRSAERRRILIVVAILMWIVALTIAFFSWYYR
KSKQKIYREELVFPVLILPTVILLFNCYLFIWRATKKQNRKFKTLQSPAT
TRKPRGVSVDSTSSISSPQQQNQLLIRSRQQKRLIVLAFTVVMAFTVCWV
PLSIYSLLKALGHAVKRRELENIFFIIAISNSLLDPLIYINFDRRKLFQR
IKRTLTRSRSAQQTAVV Run BLAST on NCBI transcript from alignment at scaffold_473:59709..60959 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067743 ID=TCONS_00067743|Name=TCONS_00067743|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at scaffold_473:59709..60959 (Clytia hemisphaerica)
GTAACTGCGAGGTAGTTCCACCAAGGAATCTTAATATGCATAATTTTTAT
AGTTTAAAAAGAAATATAcctaatattttgacttttttgaaaatctacac
AACCGCAGTTTGTTGTGCACTCCTACTCCTAGTCAAAGTTCGTTTAATCC
TTTGAAACAACTTTCGTCGGTCAAAATTGATGTAAATCAAAGGGTCTAAC
AGAGAATTCGAGATTGCGATGATGAAAAATATATTCTCCAGTTCTCTTCT
CTTAACAGCGTGTCCCAGAGCTTTCAACAGTGAATATATTGATAAAGGTA
CCCAACACACTGTAAAAGCCATCACAACAGTAAAAGCTAGCACAATCAAC
CGTTTCTGTTGGCGACTTCGGATAAGCAACTGATTCTGTTGTTGTGGCGA
CGATATTGAAGACGTGGAATCTACTGAAACACCTCTTGGTTTTCGTGTAG
TCGCTGGTGATTgcaatgttttaaattttctgttttgtttctttgttgCT
CTCCAAATGAACAAATAACAGTTGAATAACAAAATGACAGTTGGCAGGAT
CAAAACAGGAAATACCAGCTCCTCGCGATAAATCTTTTGTTTAGATTTAC
GGTAATACCAAGAGAAGAAAGCTATCGTTAAAGCAACAATCCACATAAGA
ATAGCAACCACGATCAATATTCGGCGTCTTTCAGCACTTCTGTATCGTAA
AGGGCTAACGACGATCACCAGGCGATCTATAGTGATTGCAACGACATTGA
AAATAGAGATGAATAATGACATTCGAAAGAAAACATATATCAAAAGGTCC
ATTGCCATAGTGTAAGGCTTATTtctgaaaagttctttattttccaatgc
aatgaaaaacattgtctTGGTCACAATAATGCAAATACCAACGAATAAGT
CGGATATTGATAagttcaaaataaagatcaagGAAGCTGGCACTCTCTTT
TTTCTTCTATTGATAAGAACGATTTGAACCATGTTCGCAAGTATAGCCAA
TGTACCAATAGTTGGGCTGAGGTATCTCCAAATGTCCTCGTTTGCCATTT
TTTATACCTTTGTTGACTGTTTTCCTTCTGACTTTTTGTGTTCCAAATGA
ATATATCTCGAGAAAAATTTGAAGGTATGCAGATAAAACCATAAAGTCAA
ACATTGAAATTGTAACATATATGTGAAAATTTCATGATACCTAATTTTAT
GTTtgtatttaaaatttattcataCCATTATAGCCATTAGAGCTTTTGAA
T Coding sequence (CDS) from alignment at scaffold_473:59709..60959 >TCONS_00067743 ID=TCONS_00067743|Name=TCONS_00067743|organism=Clytia hemisphaerica|type=CDS|length=954bp|location=Sequence derived from alignment at scaffold_473:59709..60959 (Clytia hemisphaerica)
ctacacAACCGCAGTTTGTTGTGCACTCCTACTCCTAGTCAAAGTTCGTT
TAATCCTTTGAAACAACTTTCGTCGGTCAAAATTGATGTAAATCAAAGGG
TCTAACAGAGAATTCGAGATTGCGATGATGAAAAATATATTCTCCAGTTC
TCTTCTCTTAACAGCGTGTCCCAGAGCTTTCAACAGTGAATATATTGATA
AAGGTACCCAACACACTGTAAAAGCCATCACAACAGTAAAAGCTAGCACA
ATCAACCGTTTCTGTTGGCGACTTCGGATAAGCAACTGATTCTGTTGTTG
TGGCGACGATATTGAAGACGTGGAATCTACTGAAACACCTCTTGGTTTTC
GTGTAGTCGCTGGTGATTgcaatgttttaaattttctgttttgtttcttt
gttgCTCTCCAAATGAACAAATAACAGTTGAATAACAAAATGACAGTTGG
CAGGATCAAAACAGGAAATACCAGCTCCTCGCGATAAATCTTTTGTTTAG
ATTTACGGTAATACCAAGAGAAGAAAGCTATCGTTAAAGCAACAATCCAC
ATAAGAATAGCAACCACGATCAATATTCGGCGTCTTTCAGCACTTCTGTA
TCGTAAAGGGCTAACGACGATCACCAGGCGATCTATAGTGATTGCAACGA
CATTGAAAATAGAGATGAATAATGACATTCGAAAGAAAACATATATCAAA
AGGTCCATTGCCATAGTGTAAGGCTTATTtctgaaaagttctttattttc
caatgcaatgaaaaacattgtctTGGTCACAATAATGCAAATACCAACGA
ATAAGTCGGATATTGATAagttcaaaataaagatcaagGAAGCTGGCACT
CTCTTTTTTCTTCTATTGATAAGAACGATTTGAACCATGTTCGCAAGTAT
AGCCAATGTACCAATAGTTGGGCTGAGGTATCTCCAAATGTCCTCGTTTG
CCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067743-exon-scaffold_473-1491911889:59709..60959 | TCONS_00067743-exon-scaffold_473-1491911889:59709..60959 | Clytia hemisphaerica | exon |
| TCONS_00067743-exon-scaffold_473-1510915933:59709..60959 | TCONS_00067743-exon-scaffold_473-1510915933:59709..60959 | Clytia hemisphaerica | exon |
| TCONS_00067743-exon-scaffold_473-1575043694:59709..60959 | TCONS_00067743-exon-scaffold_473-1575043694:59709..60959 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_473 | supercontig | scaffold_473:59709..60959 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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