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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067530 ID=TCONS_00067530|Name=TCONS_00067530|organism=Clytia hemisphaerica|type=transcript|length=662bp
ATACTTCGACGCTGCTTTAACACTTGGCTCATTATGTAGCAGTAAAGAAG
CAAGTTGGTAAAGAAGGGCACTCCCAAACCAAACAACATGTGAAAGAAAT
CGATCCAAAAGGTGACGTTAGAGTAATAGACTTTATCTGTAGTTCGAGTG
AAATACAGAACGAAAGAGATCACTATGGAATAACACCAAAGTACCAGATA
CACGGTACCAATCTTCTTGCGTTTGCCAGTAATGTAAGTATACGGAAACT
TGATTGCCACGAAGCGCTCCAAACTCATGAGTAAGATAACGAGGTTAGGT
ACAGGCAGGATGGTCAACCATAGCACTTCAAAGACTTTGTCGATGACTAG
AGAGCAACGCTGGCCAAAAGGTTTGGATTCATCACATATCAACAAGATGT
AAACATCAGTCGGCATTAAGACAACCGAGACGATCAAATCAGAGAATGCC
AATAGAAGAATCAGCAAATCTTGGCTTCGCTTATACATTCTGTTGATGAG
CATAGTGAGGCATATGAAAACATTGCTCAGTGTTGATAGAACACACAAAA
CAGCGATGAAATAGCCAGAAAAAGACATTGCAAACATAACTCCTTCTGAC
TTCATACATTCTGAGGTCGTGTTAGATGACGATCTATTCAACATCGCGTA
GTGTAATTGTGG Run BLAST on NCBI protein sequence of TCONS_00067530-protein >TCONS_00067530-protein ID=TCONS_00067530-protein|Name=TCONS_00067530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
PQLHYAMLNRSSSNTTSECMKSEGVMFAMSFSGYFIAVLCVLSTLSNVFI
CLTMLINRMYKRSQDLLILLLAFSDLIVSVVLMPTDVYILLICDESKPFG
QRCSLVIDKVFEVLWLTILPVPNLVILLMSLERFVAIKFPYTYITGKRKK
IGTVYLVLWCYSIVISFVLYFTRTTDKVYYSNVTFWIDFFHMLFGLGVPF
FTNLLLYCYIMSQVLKQRRS Run BLAST on NCBI transcript from alignment at scaffold_47:344746..345407 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067530 ID=TCONS_00067530|Name=TCONS_00067530|organism=Clytia hemisphaerica|type=transcript|length=662bp|location=Sequence derived from alignment at scaffold_47:344746..345407 (Clytia hemisphaerica)
CCACAATTACACTACGCGATGTTGAATAGATCGTCATCTAACACGACCTC
AGAATGTATGAAGTCAGAAGGAGTTATGTTTGCAATGTCTTTTTCTGGCT
ATTTCATCGCTGTTTTGTGTGTTCTATCAACACTGAGCAATGTTTTCATA
TGCCTCACTATGCTCATCAACAGAATGTATAAGCGAAGCCAAGATTTGCT
GATTCTTCTATTGGCATTCTCTGATTTGATCGTCTCGGTTGTCTTAATGC
CGACTGATGTTTACATCTTGTTGATATGTGATGAATCCAAACCTTTTGGC
CAGCGTTGCTCTCTAGTCATCGACAAAGTCTTTGAAGTGCTATGGTTGAC
CATCCTGCCTGTACCTAACCTCGTTATCTTACTCATGAGTTTGGAGCGCT
TCGTGGCAATCAAGTTTCCGTATACTTACATTACTGGCAAACGCAAGAAG
ATTGGTACCGTGTATCTGGTACTTTGGTGTTATTCCATAGTGATCTCTTT
CGTTCTGTATTTCACTCGAACTACAGATAAAGTCTATTACTCTAACGTCA
CCTTTTGGATCGATTTCTTTCACATGTTGTTTGGTTTGGGAGTGCCCTTC
TTTACCAACTTGCTTCTTTACTGCTACATAATGAGCCAAGTGTTAAAGCA
GCGTCGAAGTAT Coding sequence (CDS) from alignment at scaffold_47:344746..345407 >TCONS_00067530 ID=TCONS_00067530|Name=TCONS_00067530|organism=Clytia hemisphaerica|type=CDS|length=660bp|location=Sequence derived from alignment at scaffold_47:344746..345407 (Clytia hemisphaerica)
CCACAATTACACTACGCGATGTTGAATAGATCGTCATCTAACACGACCTC
AGAATGTATGAAGTCAGAAGGAGTTATGTTTGCAATGTCTTTTTCTGGCT
ATTTCATCGCTGTTTTGTGTGTTCTATCAACACTGAGCAATGTTTTCATA
TGCCTCACTATGCTCATCAACAGAATGTATAAGCGAAGCCAAGATTTGCT
GATTCTTCTATTGGCATTCTCTGATTTGATCGTCTCGGTTGTCTTAATGC
CGACTGATGTTTACATCTTGTTGATATGTGATGAATCCAAACCTTTTGGC
CAGCGTTGCTCTCTAGTCATCGACAAAGTCTTTGAAGTGCTATGGTTGAC
CATCCTGCCTGTACCTAACCTCGTTATCTTACTCATGAGTTTGGAGCGCT
TCGTGGCAATCAAGTTTCCGTATACTTACATTACTGGCAAACGCAAGAAG
ATTGGTACCGTGTATCTGGTACTTTGGTGTTATTCCATAGTGATCTCTTT
CGTTCTGTATTTCACTCGAACTACAGATAAAGTCTATTACTCTAACGTCA
CCTTTTGGATCGATTTCTTTCACATGTTGTTTGGTTTGGGAGTGCCCTTC
TTTACCAACTTGCTTCTTTACTGCTACATAATGAGCCAAGTGTTAAAGCA
GCGTCGAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067530-exon-scaffold_47-1491911889:344746..345407 | TCONS_00067530-exon-scaffold_47-1491911889:344746..345407 | Clytia hemisphaerica | exon |
| TCONS_00067530-exon-scaffold_47-1510915933:344746..345407 | TCONS_00067530-exon-scaffold_47-1510915933:344746..345407 | Clytia hemisphaerica | exon |
| TCONS_00067530-exon-scaffold_47-1575043694:344746..345407 | TCONS_00067530-exon-scaffold_47-1575043694:344746..345407 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:344746..345407 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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