TCONS_00067358 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067358
Unique NameTCONS_00067358
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2911

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067358 ID=TCONS_00067358|Name=TCONS_00067358|organism=Clytia hemisphaerica|type=transcript|length=2911bp
TTGGTTATTTCTCGAATGGTCACCAATTTGGATCAAGAAGTGGATTTGTT
GCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGAACAAC
ATAATCAATGGATGAAAACTTATTTGAAACAATTATCTTCGGCAAAAGCT
GACAAAACTGACGTCGAAGAATTGAGCAACAAAGTTGACCAGCTATCAAT
GGAATCAAAATCTGTAAAGGaATTGAGCAACAAAGTTCACCAGCTATCAG
TGGAATCAAAATCTGTAAAGGACCTAACAAAGACACATTGGAACTTGCCA
GAGCCTGTTTCCATCTTCTTTGGACGAGAAAGTTTGATTAAATCCATTCA
CTTGAAACTTCAACAAAATCAAGCAGTTGCTTTGAGTGAAATGGGAGGTG
TGGGGAAAACACAAACCGCTGCAAAGTTCGTTCAAATACACAAGGATGAA
TATCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAGATCTCTGAA
CGAGATTTTGTGTGCATTTGGTTGTAAACAACTAATACCTGATGAACCTT
CGATGGAAACTCTTGCTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCC
CAAGGATCGCTAGTTGTATTGGATGACGTCACTGAGGTCACAAAAGACGT
CACTTCATTCATTCGaaatgtgaaagaaaaaatcagcTTATTGTTGACAT
CTCAATTGAGGGATTGGGAAGATTATGATTTGATTCAAATTGCTGTTCCA
TGTTTCCAAGAACAAGAATCCATGGGCTTCTTACAGAATGAACTTTCTTC
AGCCAGCCAACATGACATCTCCTTTTTAGCGAGTCGTTTACAATCATTAC
CTTTAGCCCTTCACCAAGCCATTTGTTACATCAAGAAACATAAAGTTCCT
CTACACAAATACATCGAACAATTCGAAGTTTGCAGAGAAATTGTTTTGGG
AATGAAAATCAATTCTTTTACTGAATATGACAAAACATTGTTGACAGTTT
GGGATTTGGCTTTTGAGAAAATTCGGGTCGAATCAAAGAATGCTCTTTTG
TTCTTGGGAATGATGGCTTTCATGGACaatcgaaaaatcaataaaaagac
aTTCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAATGANAAGAATG
CTCTTTTGATCTTGGGAATGATGGCTTTCATGGACaatcgaaaaatcaat
aaaaagacaTTCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAGTGA
AATCATCAATCTGCTTTGTCAATATTCATTGGTCAACGAGCGGAACGAAT
ATTTAGAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCGTATTGAA
CAAAAACAATTTGTTAAGGACGAATGTCCGTTGACACTTCTTGAAGGTGT
TCTTTTGAAAATCAAGTCTTCTGTTGCGGTTTTGGGATTAAATGCTGACT
GTGAAGATTTATGGTACATCCATGTTTTTCGTTTGATCATGAGTGGTGCA
CTCAAAACTATCAACTTTGATGTTTCCCTTGTGTTAAATATCGCCATAGG
CAGAATGGAGATGGAAAACTTTTACCAAATTTCTGAACttcttttaaaag
ttttgtttaaaCAATATAGGTTGTTTCGAGATGTGGAAACTTTTCACACG
TTGTTGCTTGTTCATCATCGTTTCATAAACGCGTCAATTAATTTAGGTTT
GCTTAATTTGAATGagatttttgcttttgaagAAGAGTTTTCCTCAGAGC
TTGAAGAACattttgaagaagtttaccAGTGGAAGCTACAGCAAGCTGAG
GTATATAATGTACATGGACGAGTGTCGTTATTCAATGATATCGTTCGAAA
TTTATTTAATGAACTTGTCAAGAAGAAAGGATTTGataatattaaattaa
aattggcGAGACATCTCACTGCAAGGGATGTTGAAGTTTTGTTGATTTCC
GTTGACACAAATAATCTCAGTGACGAGGAATTTTTGATGTATTATGATGC
AAAATGTTCTTTATACATCCAGAATGGTTGCTTTGATTTAGCTGAACAAA
CCATGAACGATTGGAAAGAACATATACAAAGACAAACATTTTCTCGAATA
TGGCACTTTAACTTGACAAAAAGGAATTGCTTTTTACTTTACAAGAAAGG
AAATTACAACGAAGCGCTTCTTGCATGCGATGTTCTTAAACCAGACATTG
TTTTTACTGGTGCAAATGTTTTCATTTGGGAAGCAttgattttgatcaaa
ttaGGAAAGTTCAACGATGCAGAAGTGTTACTTGATGACCTTGACCAACA
CAATAAGATTACCATTGAAATCAGTTCATACCTGAAATTTCGAAAGCATG
ACTTTGAAGCAGTAGAAAATTTCCTAATCGATGGGGAAGATGAGCGTCag
tcaaatcttttgttttcggTAAAGGAATATGCGAAACTGCATCGACAACT
CAAAAATAATAAATCGAAAGAATTGGTTGAACAATGTCTGCAAATGAAGA
AAAGTATAACTAAGTTCTTTGAAGAAGATTTAAATTCGATTCGTTTTTGA
AATGCAATTTTATCAAATTGTGATTAGAATCGCATGTTTGGGAATTACTC
CAActtttggctaaaatttttaACTGACTGCAATGTAATTGTTGTATTGA
CTTGGCCTGGAAAAGCAGAAATGgaagtgtttttattttaattatgaAAA
TATTCTAAGGGGtgttttcagggggtacccgattccgccaTTCGGTCTAA
ATTTTGTCCAATTTCTGTCACACCGTCAAGTTCAAGTCTGAAATTCCACC
ACCGAAAATTTCCAATGAAATTGAttcttttctccaaaattccagaattt
tgactttttggtgTAAATTCCGAAATTTCGAACGATTATTTGCCAAATTC
CATTTTTTCGG
Run BLAST on NCBI

transcript from alignment at scaffold_469:538205..552172+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067358 ID=TCONS_00067358|Name=TCONS_00067358|organism=Clytia hemisphaerica|type=transcript|length=13968bp|location=Sequence derived from alignment at scaffold_469:538205..552172+ (Clytia hemisphaerica)
TTGGTTATTTCTCGAATGGTCACCAATTTGGATCAAGAAGTGGATTTGTT
GCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGAACAAC
ATAATCAATGGATGAAAACTTATTTGAAACAATTATCTTCGGCAAAAGCT
GACAAAACTGACGTCGAAGGTGAGATACATTGGTTTTCAATTTTGTCGAA
AGCACATTTACTTTCTTACCTCTTTTGAAGTCTTTGTATTGTAAGAGCTG
AATCTTGTTAAACTTATTACCTGTTGCCCCCNACTGACGTCGAAGGTGAG
TTGCATTGGCTTTAACTTTGTCGAAATCACATTTACTTTCTTaactgttt
tgaatttttgacattttaggaGCTGAATCTTGTTAACCTTTTTAACCTCT
TGACACTGAATTTTGCGGTCCTTGAATAACACCATTTGTTTTACTCTAGA
TTTAGCCAAGTCAATGAATAGTGGACTGAATACGAAAGCTGATAAAGATG
AAATGGATGGTATGTTTGTTTCTTTACTTGTTTTATATTTCGGAGAAAAT
GGTATCTACCTGATGATTGTCTAATAAAAAGTAGGAGGCATCGCCAAGTT
GACGTTCTAAATAAAATTGctccttttgaaaaatattgatttctTCTTGT
TATCTATGTTAAagtttttcgatatttttgtaTATAAGAAGCTTTTTGTG
ATATATTTTCACTATCTTTCTGTCTGAATAGGCATTTTCCGATAAAAATC
ACTATTTGTCTTACTCCAGGTTTAGCCAAGTCAATGAATATGAAAGCTGA
CAANTCCGATAAATATCACTATTTGTTTTACTCTAGGTTTAGCCACGTCA
ATGAATATGAAAGCTGACAAAGATGAAATGGATggtatgttttgttttgt
ttcaaaagATTCTGAAATATGGACTAGCTCGCTAAGATTAAATGTAGCGT
TTTGTTTAATGGTTCCAGTCTGCAAGTGCTAGGTGGGGTGTCCCTAGTGG
CCGTCAATCTAGATAGATAGAAGTTCTATGGACCTTTTGTTAGGCGTGAC
GTGGCATGTTGGATTGGCGCTGTGTAGTATCTacctattctcaacttcag
ttgagctagaatctgagaatgtgtgtctgtgtgtctgtctgtccgtCTGT
GtctatgtcccaaaactttggggcagcctggagacttcatcAATGGACGG
GATATCCATTGCTTCAAATAATTTATTGGTAATTGATAATTTGATTATGA
GATTTAGGAAGCCTAGATAGGATACCATTTTAGCTCCAATTCTAATGAGT
GGTGAAAACATTAGGTAATGACTCCACACGATAGCCTGATAGTAGTTCAA
TTTCCATGTGTTTAATTTTTATCTTACAGTGTTTCTTGAAACTAAACATC
CGCGCGATAAGCCTGAAAGTACACATGCAAACAATAGGTtacaaagtcta
aaaatatcaaatagcCTAGAGATTGTGTATATACTTTCTGGCACTGGTAT
AGAAAAATCAATATATAAAAATCAAAGTTGATCTAACAGTTTACTAAAAG
GCTATTGTGAGGagtcattacgtaatgttttNATAAAAATCAAAGTTGAT
CTAACAGTTTACTAAAAGGCTATTGTGTGGagtcattacgtaatgttttt
gTCGCCAATCATAACTAGGTTTAAATGGTATCCTAACTAGCAAAACGTCT
ATTACATTCAATTGATCGATTATTCAACGATTGGCTCTAACATGATCTAC
AGATCGATTGTTAAACGGTTGCAAGTTCAATTCATATTTCGATCAATGAT
CAATGATCAATATTCAAGAATTTGGAATATGCTCAATCACCGTTAAATTA
TCGATTGGAAAATGTATCGATTGTGCGAGTCTGGTTTATAAGAAATGGAA
ATCAATAAATATTGATCAACCTgctcaaaattctcaaaatgtgTAACTCC
ACGTTTCAATGATATttctaccgggtgtcccagaaaaaagtccccctctt
tgaagtgaattttctcgagttctatgagCTTTGAAAGCATCAatcctttt
gcattggaaaaaggaacgataaacttaaattttgaggggtcatttgttaa
atttagtcaactagataaaaagttatggtctaaatgaaaaattacttttc
aaaaaaatcgaaaaaatgcgAAAAATTAGGGTTTTAAGAGTCACTTTTTC
GCCTTGTCTCTCTAAGGGCAACTTTATTCTCTGTTGGGGCCGGTTTTCGC
AGCTCCGGTTTTACATACTTTTGACATTCTTCAACCCTAGTACTTCCTGG
TTgtttaatttgattatttcatcGATGAATAATCAAACACTATACCAAAT
CGTCTTGTTTATTATTGAAATAAGTATCTTGTTCTTTTTAATAGAATTGA
GCAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTGTAAAGGGTAAA
GCTTTAGctatgatttttattttctctatccacgcttattattattttta
ttatgtaAAAGGAATGTTGCTGAATAAAAAGGCCTTTTCTGACGAgtatc
attctttttaatagaATTGAGCAACAAAGTTCACCAGCTATCAGTGGAAT
CAAAATCTGTAAAGGGTAAAGCTTTAGCTATGATTCTCATTTTTACTATC
CATTCTTTAACTTAAAACTCGCACCGATGAACAATACCGGTAAACCTTTA
CAAATTCAATCAATCCATTCAAAAAGAAATGACCTTCTTTGTTGGATATA
ACTTTAGGGagatcctataaattaaccttgtTATGTtagtccgtccgtct
gttataagcttttctcgggacttgctcattagatttttctgattattttt
tcGCACAATGATTTGAAATGGTAattcccaaaatgtgacggagcccgaat
ttcgaaaaagaaaattctCCCAGTTGCCAGATCCTGAAGTGTcacggaaa
aaagtttttcagaattttctggagaatttattattagttttttctatttt
ttgtacATAGATGCGTATTAATACTGCTATCAATGTGTCTTACTTACTTG
ATAATTTCTTTATCATCGAGATGCCCAAAGCTTAGCATCGTTTGGTTTCC
TAAGAAGTCATATTTAATTCCGGAAGGAACTCCTTAAGAATTGCTGGAAC
AGCCAAAAACCGGCTTAAAGCGGGTTACCTTCACTATTTCGAGAATATCA
GTTATATAAAGTGTCACTTGTTGCTCTTTTGAACCTTaagaaatatttat
ttgtaTTCCTTCCAGACCTAACAAAGACACATTGGAACTTGCCAGAGCCT
GTTTCCATCTTCTTTGGACGAGAAAGTTTGATTAAATCCATTCACTTGAA
ACAAAATCAAGCAGTTGCATTGAGTGAAATGGGAGGTGTGGGGAAAACAC
AAATCGCTGCAAAGTTCGTTCAAATACACAAAAATAAGGATGAATATCAG
AAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAGATCTTTGAGCGAGAT
TTTGTGTGCATTTGGTTGGAAACAACTAATTCCTGATGAACCTTCGATGG
AAAGTCTTGCTTTCATTTTCCTCTCTAAGATTTGCGAAGGCTCCAAAGGA
TCGCTGGTTGTATTGGATGACGTCACTGAGGTCACAAAAGACGTCACTTC
ATTCATTCGaaatgtgaaagaaaaaatcagcTTATTGTTGACATCTCAAT
TGAAAGATTGGGAAGGTTATGGTTTGATTCAAATTGCTGTTCCATGTTTC
CAAGAACAAGAATCCATTGGTTTCTTACAGAATGAGCTTACTACAGCCAG
CCATCAAGAAATCTCCATTTTAGCGAATCGTTTACAATCATTACCTTTAG
CCCTTCACCAAGCCATTTGTTACATCAGAAAACATAAAGTTCCTCTACAC
AAATACattaaagaatttgaaaaatgcagTGAAAGTGTTTTGGGAATGAA
GGGAATGAAATTTAATTCTTTTACTGAATATGACAAAACATTGTTGACAG
TTTGGGATTTGGCTTTTGCGAAGATTCGGGTCGAATCAAAGAATGCTCTT
CTGATCTTGGGAATGATGGCTTTCATGGACaatcgaaaaatcaataaaaa
gacaTTCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAATGAAATAA
TCTCACTGCTTGGTCAATATTCATTGGTCAACGAGTGGAAAGATTGTTTA
GAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCGCATTGAAAAAAA
ACAGTTTGTTGAAGATGAAAGTCCGTTGACACTGCTTGAAGGTGTGCTTT
TGAAAATTGAGGGCTCCGTTGAAGATTTGGTTATAAATGCTGACCAGGAG
GATTTATGGTACATTCATGTTTTTCATTTGATCATGAGTGGTGCACTCAA
AACTATCAACTTTGATGTTACCCAGGTGTTTACTATCGCCGTAGGCAAAA
TAGAGATGGAAAAGTTGTACCAAATTTCTGAATTTCTATCAAAAGATTTG
TTAAAACAATATAGGTGGTCTCGAGATGTGGAAACTTTTCACATGTTATT
GCGTGTTCATTATCGTTTCATAGACGCGTCAATTAGATTAGGTTTACTTA
ATGTGAATGAAATTATTGCTTTTGAAGAAGAGTTTTCCTCAGAGCTTGAA
GAGCATTCTGAAGAAGTTTACTGGTGGAAGTTACAGCAAGCTGAGGCATA
TAATATACATGGACGAGTGCAATGCAATGATATCGTTCAAAAATTATTCA
ATGAACTGGTCAAGAAGAAAGGATTTGATGATATTAAATTAGGATTGGCG
AGTTTTCTCACCGTAAGGGATGTTGAAGTTTTGTTGAATACCGTTGACAC
AAATAATCTCTGTGACTTGGACTTTTTGGTTCATTATAATGCAAAATGTG
ATTTATACATCAAGAACGGTTGCTTTGATTTGGCTGAACAAGTCATGAAG
AATTGGAAAGAACATTTACACAGAAAACAATTTTCTCGAATGTTGCActt
taatttcacaaaaaagaatTGCTATTTACTTTACAAGAAAGGACATTACA
ACGAAGCATTGCTAGCTTGCGATGAacttaaatgtgatttttttactGAT
GCAGATATTTTAGTATTCGAAGCAttgattttgatcaaattaAGAAAGTT
CAACGACGCAGAAATTTTACTTGACACCTTTGACCATCACAATAAGATTA
TTATTGAAATCAGCTCATACCTGAAATTTCGAAAGCATGACTTTGAGGCA
GTAAAGAATCTCCTCGCCGAAAAGGAAGATGAGCGCCggtcaaatctttt
gtttttggtAAAGGAATATGCGAAACTGCATCGACAACTCGAAAATAATA
AATCGAGAGAATTGGTTGAACAATGTTTGCAAATGAAAACATTTGTAAAT
AATATCTTTCAAGTAGAATTGGATTCGATTGGtatttaaaatacaatttt
atcgATTTATGATTAGAATCGGATCTTTGGGAATTACTCAAACTTTTCGC
TAAACTGATGAGTTTTTCAATTGGTTGCAATGTAATTTTTGCATTGACTT
GGCCCGTAAAACCATGGCCCCCGGCGTGTAAAAaaagtgagggggccaaa
aaaaattaaaaatgtcgtccaccatggttgggcgacgaagaaaatttttc
gtttttaaCCCTTATTTTGCCCCTAAAACGGTATATTTAAGCATAAGCAG
TTATCTcaatttctgacgaaatataaatagtcgcgtctatTTCTCACCAT
TACTTCATTGCCCAAagccaaaagaatctttttcacttaaactgatataa
cattcaattttggaaacagtaatatgaataaatttattatccatcggcta
actaaccgattataggctaattttctgataatgaAGTTCTGCTGAATTGA
CAAAAAGCCCTATTTTTTTACCCTGCGccaaaaagtggaatatttcctaa
accaaaattgacccaaagtcaaaatttgttaTGAGCATTTCTCTGACAAT
GACAAACCATGTATTCCTTAGGGAATGGTGAAAAATAGACGCNAAATTTG
TTATGAGCATTTCTCTGACAATGACAAACCATGTATTCCTTAGGGAATGG
CTTTGGACAATGAAGTAATGGTGAAAAatagacgcgactatttatatttc
gtcagaaatcgaggtttttatcgattttcggctaattAGCCTATacaaaa
tagtctaaatagcctatgataggctaatcagcctttgataggctaatttg
aaggtgttctttACTGTTTGGGACAACTTATGTTatttttctataaatta
acGTGTGTTcatccgttcgtctgttaccaaattttctcaggattgaatca
taggaatcttttgagttttggtacaaaggtgcaaaatggtagtggccaaa
atgtgacggggcccgattttgggccaaaaaactgcttaaaaacgtgtttt
ttggactttgtgaaaaattggatcattaatttcttctgattttttgcatg
aaagtagggtaccatcataggttttttgcatgaaagtagggtaccatcat
aggtaaataATGGCTCtagcatatttttgaaaaaaggttttgttggctca
aaaaacgcatgtttatctttaagaatcactattaatataataagcataca
tcaatgttcttaatcaaattactcaatttttttatgagatagatgttttt
tttgctcacgaagtcttgaatatgaaagaatatttcaatagcatgaaatt
ttggtttctaaacgtttcattttataagaaacaaacgactaattttaata
gatcgtcactatttgtgttctgaatgattgtttattggtcacgtcacgta
gatatcaattataaatgtgttaaatgcataaccaggtaggtctatAAAAG
TGGNATTTTCTGATAATGAAGTTCTGCTGAATTGACAAAAAGCCCTATTT
TTTTACCCTGCGCCAAAAAGTGCAATATTTCCTAAACCAAAATTGaccca
aagtcaaaatttgttaTGAGCATTTCTCTGACAATGACAAACCATGTATT
CCTTAGGGAATGGCTTTGGACAATGAAGTAATGGTGAAAAatagacgcga
ctatttatatttcgtcagaaatcgtggtttttatcgattttcggctaatt
AGCCTATacaaaatagtctaaatagcctatgataggctaatcagcctttg
ataggctaatttgaaggtgttctttACTGTTTGGGACAACTTATAATGTT
ATAATGTTTACACGTTTACATTTGTTatactttttatattttccagcaaa
aacaaaagattaagaaaataaaaataaataaatgaagaGAATGAGATGAG
TACACCATTGTACATCCTCCAAAGCGAGTATTGGATTCGAATCAACCTCG
CTTTGGAGTATTGCATCAAAGAAGTGCTCATTGGTGTACTTCACAACGTG
CACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAAAACAACTACA
TCAAATATTCGTGCAATGCAAACAAAACAAGAAACACGAGTTGAACAAAG
TGTTGAAGAAAGAACAATGGGAGATATTGTGTCCACAAAATGGATTAACC
AACCCAGAAGATTGGGATATCACCTTACTGATTGCTGTATTGAGATCAGT
GGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTCTTCAACCCA
ACGATCAATCNTGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGATCA
AGAAGTGGATTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCA
AAAATATCGAACAACATAATCAATGGATGAAAACTTATTTGAAACAATTA
TCTTCGGCAAAAGCTGACAAAACTGACGTCGAAGGTGAGATACATTGGTT
TTCAATTTTGTCGAAAGCACATTTACTTTCTTACCTCTTTTGAAGTCTTT
GTATTGTAAGAGCTGAATCTTGTTAACCTTTTTAACCTCTTGACACTGAA
TTTTTGTGGTCATTGAGTAACACCATTTGTTTTACTCTAGATTTAGCCAA
GTCAATGAATAGTGGACTGAATACGAAAGCTGATAAAGATGAAATGGATG
GTATGTTTGTTTCTTTACTTGTTTTATATTTCGGAGAAAATGGTATCTAC
CTGATGATTGTCTAATAAAAAGTAGGAGGCATCGCCAAGTTGACGTTCTA
AACAAAATTGctccttttgaaaaatattgatttctTCTTGTTATTTATGT
TATagtttttcgatatttttgtaTTATAAGAAGCTTTGTGTGATATATTT
TCACTATCTTTCTGTCTGAATAGGCATTTTCCGATAAATATCACTATTTG
TTTTACTCTAGATTTAGCCACGTCAATGAATATGAAAGCTGACAAAGATG
AAATGGATggtatgttttgttttgtttcaaaagATTCTGAAATATGGACT
AGCTCGCTAAGATTAAATGTAGCGTTTTGTTTAATGATTCCAGTCTGCAA
GTGCTGGGGTGGGGTGTCACTAGTGGCCGTcaatatagatagatagaagt
TCTATGGACCTTTTGTTAGGCGTGACGTGGCATGTTGGATTGTCGCTGTG
TGGTATCTACCTATTCttaacttcagttgagctagaatctgagaatgtct
gtctgtgtgtctgtctgtccgtctgccccaaaactttggggcagcctgga
gacttcaaaaatgttcgattaagctgaaattttgcacatttgttccttgg
gtgaatatctgagggtatttcttttatttttttcaaaaactttgattttt
ggggcctggggacaagtttttcgccagaacgaggctaaaactttggggca
gcctggagacttcaaaaattgttcgatttggctgaaatattacacacttg
ttccttgggtgaatatctgagggtatttctttcatttttcaaaaattttg
atttttcgggCCTGGGggcgagtttttcaccaaaacgaggcgaAGACTTt
gggggcagcctggagacttcaaaaatttttcgatttggctgaaattttgc
acacttgttccttgggtgaatatctggggttctGCAACTGGACCTATGAA
TAGTTTGAAGGCACtaaagttgagcccagtgcgttgctcACGTTCGACTA
TATAACAATTAACTATAAAAACACTCAACAATCgattcattttttcaatg
aCACATCAATGGACAGGATATCCATTGCTTCAAATAATTTATTGGTAATT
GATAATTTGATTATGAGATTTAGGAAGCCTAGATAGGATACCATTTTAGC
TCCAATTCTAATCAGTGGTGAAAACATTAGGTAATGACTCCACACGATAG
CCTGATAGTAGTTCAATTTCCATGTGTTTAATTTTTATCTTACAGTGTTT
CTTGAAACTAAGTGTCCGCGCGATAAGCCTGAAAGTACACATGCAAACAA
TAGGTtacaaagtctaaaaatatcaaatagcCTAGAGATTGTGTATATAC
TTTCTGGCACTGGTATAGAAAAATCAATATATAAAAATCAAAGTTGATCT
AACAGTTTACTAAAAGGCTATTGTGAGGagtcattacgtaatgttttNTG
ATCTAACAGTTTACTAAAAGGCTATTGTGTGGagtcattacgtaatgttt
ttgTCGCCAATCATAACTAGGTTTAAATGGTATCCTAACTAGCAAAACGT
CTATTACATTCAATTGATCGATTATTCAACGATTGGCTCTAAGATGATCT
ACAGATCGATTGTTAAACGGTTGCAAGTTCAATTCATATTTCGATCAATA
TTAATATTCAAGATTTTAGAATAGGCTCAATCACCGTTAAATTATCGATT
GGAAAATGTATCGATTGTGCGAGTCTGGTTTATAAGAAATGGAAGTCAAT
AAATATTGATCAACCTGCTCGAAATTCTCAAAATGTGTAACTCCACGTTT
CAATGATATTTCTACCGGGTGTCCCGGAAAAAAGTccccctctttgaagt
gaattttctcgagttgtATGAACTTTGAAAGCATCAATTNcccagaaaaa
agtccccctctttgaagtgaattttctcgagttctatgagCTTTGAAAGC
ATCAatccttttgcattggaaaaaggaacgataaacttaaattttgaggg
gtcatttgttaaatttagtcaactagataaaaagttatggtctaaatgct
aaaaaattacttttcaaaaaaatcgaaacaaTGCGAAAAATTAGGGTTTT
AAGAGTCACTTTTTCGCCTTGTCTCTCTAATGGTAACTTTATTCTCTGTT
AGGGCCGGTTTTCGCACCTCCGGTTTTACATACTTTTGACATTCTTCAAC
CCTAGTACTTCTTGGTTgtttaatttgattatttcatcGATGAATAATCA
AACACTATACCAAATCGTCTTGTCTATTATTGAAATAAGTATCTTGTTCT
TTTTAATAGAATTGAGCAACAAAGTTGACCAGCTATCAATGGAATCAAAA
TCTGTAAAGGGTAAAGCTTTAGctatgatttttattttctctatccacgc
ttattattatttttattatgtaAAAGGAATGTTGCTGAATAAAAAGGCCT
TTTCTGACGAGTATCATCTTTTTAATAGAATTGAGCAACAAAGTTGACCA
GCTATCAGTGGAATCAAAATCTGTAaagggtaaagttttagttATGATTC
TCATTTTTAATATCCATTCTTAAACTTAAAACTCGCACCGATGAACAATA
CCggtaaaactttacaaattcaATCAATCTATTCAAAAAAATGACCTTCT
TTTCTTTGTTGGACATAACTTTagggaggtcctataaattaaccttgtTA
TGTtagtccgtccgtctgttataagcttttctcgggattagCTCAttaga
tttttgtgatttttcgcACAATGATTTGAAATGGTAATTCCCAAAATGTG
GTGGAGCCCGactttcgaaaaagaaaattctCCCAGTTGCCAGATCCTGA
AGTGTcacggaaaaaagtttttcagaattttctggagaatttattattag
ttttttctattttttgtacATAGATGCGTATTAATACTGCTATCAATGTG
TCTTACTTACTTGATAATTTCTTTATCGTCGAGATGCCCAAAGCTTAGCA
TCGTTTGGTTTCCTAAGAAATCATCTTTAATCCCGGaaggaactccttaa
aaattgCTGGAACAGCCAAAAACCGGCGTAAAGCGGGTTTCCTTCACTAT
TTCGAGAATATCAGGTATATAAAGTGTCACTTGTTGCACTTTTGAACCTT
aagaaatatttatttgtaTTCCTTCCAGACCTAACAAAGACACATTGGAA
CTTGCCAGAGCCTGTTTCCATCTTCTTTGGACGAGAAAGTTTGATTAAAT
CCATTCACTTGAAACTTCAACAAAATCAAGCAGTTGCTTTGAGTGAAATG
GGAGGTGTGGGGAAAACACAAACCGCTGCAAAGTTCGTTCAAATACACAA
GGATGAATATCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAGAT
CTCTGAACGAGATTTTGTGTGCATTTGGTTGTAAACAACTAATACCTGAT
GAACCTTCGATGGAAACTCTTGCTTTCATTTTCCTCTCTAAGATTTGTGA
AGGCTCCCAAGGATCGCTAGTTGTATTGGATGACGTCACTGAGGTCACAA
AAGACGTCACTTCATTCATTCGaaatgtgaaagaaaaaatcagcTTATTG
TTGACATCTCAATTGAGGGATTGGGAAGATTATGATTTGATTCAAATTGC
TGTTCCATGTTTCCAAGAACAAGAATCCATGGGCTTCTTACAGAATGAAC
TTTCTTCAGCCAGCCAACATGACATCTCCTTTTTAGCGAGTCGTTTACAA
TCATTACCTTTAGCCCTTCACCAAGCCATTTGTTACATCAAGAAACATAA
AGTTCCTCTACACAAATACATCGAACAATTCGAAGTTTGCAGAGAAATTG
TTTTGGGAATGAAAATCAATTCTTTTACTGAATATGACAAAACATTGTTG
ACAGTTTGGGATTTGGCTTTTGAGAAAATTCGGGTCGAATCAAAGAATGC
TCTTTTGTTCTTGGGAATGATGGCTTTCATGGACaatcgaaaaatcaata
aaaagacaTTCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAATGAN
AAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGACaatcgaaa
aatcaataaaaagacaTTCAGCTATTTTGATAAAGTTGACGAATTTGAAT
TAAGTGAAATCATCAATCTGCTTTGTCAATATTCATTGGTCAACGAGCGG
AACGAATATTTAGAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCG
TATTGAACAAAAACAATTTGTTAAGGACGAATGTCCGTTGACACTTCTTG
AAGGTGTTCTTTTGAAAATCAAGTCTTCTGTTGCGGTTTTGGGATTAAAT
GCTGACTGTGAAGATTTATGGTACATCCATGTTTTTCGTTTGATCATGAG
TGGTGCACTCAAAACTATCAACTTTGATGTTTCCCTTGTGTTAAATATCG
CCATAGGCAGAATGGAGATGGAAAACTTTTACCAAATTTCTGAACttctt
ttaaaagttttgtttaaaCAATATAGGTTGTTTCGAGATGTGGAAACTTT
TCACACGTTGTTGCTTGTTCATCATCGTTTCATAAACGCGTCAATTAATT
TAGGTTTGCTTAATTTGAATGagatttttgcttttgaagAAGAGTTTTCC
TCAGAGCTTGAAGAACattttgaagaagtttaccAGTGGAAGCTACAGCA
AGCTGAGGTATATAATGTACATGGACGAGTGTCGTTATTCAATGATATCG
TTCGAAATTTATTTAATGAACTTGTCAAGAAGAAAGGATTTGataatatt
aaattaaaattggcGAGACATCTCACTGCAAGGGATGTTGAAGTTTTGTT
GATTTCCGTTGACACAAATAATCTCAGTGACGAGGAATTTTTGATGTATT
ATGATGCAAAATGTTCTTTATACATCCAGAATGGTTGCTTTGATTTAGCT
GAACAAACCATGAACGATTGGAAAGAACATATACAAAGACAAACATTTTC
TCGAATATGGCACTTTAACTTGACAAAAAGGAATTGCTTTTTACTTTACA
AGAAAGGAAATTACAACGAAGCGCTTCTTGCATGCGATGTTCTTAAACCA
GACATTGTTTTTACTGGTGCAAATGTTTTCATTTGGGAAGCAttgatttt
gatcaaattaGGAAAGTTCAACGATGCAGAAGTGTTACTTGATGACCTTG
ACCAACACAATAAGATTACCATTGAAATCAGTTCATACCTGAAATTTCGA
AAGCATGACTTTGAAGCAGTAGAAAATTTCCTAATCGATGGGGAAGATGA
GCGTCagtcaaatcttttgttttcggTAAAGGAATATGCGAAACTGCATC
GACAACTCAAAAATAATAAATCGAAAGAATTGGTTGAACAATGTCTGCAA
ATGAAGAAAAGTATAACTAAGTTCTTTGAAGAAGATTTAAATTCGATTCG
TTTTTGAAATGCAATTTTATCAAATTGTGATTAGAATCGCATGTTTGGGA
ATTACTCCAActtttggctaaaatttttaACTGACTGCAATGTAATTGTT
GTATTGACTTGGCCTGGAAAAGCAGAAATGgaagtgtttttattttaatt
atgaAAATATTCTAAGGGGtgttttcagggggtacccgattccgccaTTC
GGTCTAAATTTTGTCCAATTTCTGTCACACCGTCAAGTTCAAGTCTGAAA
TTCCACCACCGAAAATTTCCAATGAAATTGAttcttttctccaaaattcc
agaattttgactttttggtgTAAATTCCGAAATTTCGAACGATTATTTGC
CAAATTCCATTTTTTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042091XLOC_042091Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067358-exon-scaffold_469-1491911889:538205..538373TCONS_00067358-exon-scaffold_469-1491911889:538205..538373Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1510915933:538205..538373TCONS_00067358-exon-scaffold_469-1510915933:538205..538373Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1575043694:538205..538373TCONS_00067358-exon-scaffold_469-1575043694:538205..538373Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1491911889:540599..540649TCONS_00067358-exon-scaffold_469-1491911889:540599..540649Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1510915933:540599..540649TCONS_00067358-exon-scaffold_469-1510915933:540599..540649Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1575043694:540599..540649TCONS_00067358-exon-scaffold_469-1575043694:540599..540649Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1491911889:540769..540819TCONS_00067358-exon-scaffold_469-1491911889:540769..540819Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1510915933:540769..540819TCONS_00067358-exon-scaffold_469-1510915933:540769..540819Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1575043694:540769..540819TCONS_00067358-exon-scaffold_469-1575043694:540769..540819Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1491911889:549533..552172TCONS_00067358-exon-scaffold_469-1491911889:549533..552172Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1510915933:549533..552172TCONS_00067358-exon-scaffold_469-1510915933:549533..552172Clytia hemisphaericaexon
TCONS_00067358-exon-scaffold_469-1575043694:549533..552172TCONS_00067358-exon-scaffold_469-1575043694:549533..552172Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:538205..552172 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19587	0	0.271794	0.245262	1.83596	1.17034	2.16884	3.39567	0.000807532	1.55943	1.92964	1.17301	2.47651	1.73997	0.676962	0.794679	0.266641	0.35116	8.75059e-05	0.520277	0.498582	0.295293	0.513908	0.462866	6.26408	6.83549	0.441441	0.390848	0.291058	0.270336
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067358 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top