TCONS_00067061 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067061
Unique NameTCONS_00067061
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067061 ID=TCONS_00067061|Name=TCONS_00067061|organism=Clytia hemisphaerica|type=transcript|length=229bp
GTGGGTAAAAAGATCATATTTAGCAGAATAAAAACATCATTAATCCTTGT
ATAATAATATAATCCCTTTAAATTCTCTCATTCTAAAAAATATATTAcag
aaaaatacaattttgaaaataccaTTAGAAAATTAATAACAGTTGTAGAA
CAAAATATAAAAGTATGAAATCAGAAGAATTAAAATCTTGAAATCTCTCT
GATTagacataaaaaaatcattgaaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_462:928111..928339

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067061 ID=TCONS_00067061|Name=TCONS_00067061|organism=Clytia hemisphaerica|type=transcript|length=229bp|location=Sequence derived from alignment at scaffold_462:928111..928339 (Clytia hemisphaerica)
ttttttcaatgatttttttatgtctAATCAGAGAGATTTCAAGATTTTAA
TTCTTCTGATTTCATACTTTTATATTTTGTTCTACAACTGTTATTAATTT
TCTAAtggtattttcaaaattgtatttttctgTAATATATTTTTTAGAAT
GAGAGAATTTAAAGGGATTATATTATTATACAAGGATTAATGATGTTTTT
ATTCTGCTAAATATGATCTTTTTACCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041900XLOC_041900Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067061-exon-scaffold_462-1491911889:928111..928339TCONS_00067061-exon-scaffold_462-1491911889:928111..928339Clytia hemisphaericaexon
TCONS_00067061-exon-scaffold_462-1510915933:928111..928339TCONS_00067061-exon-scaffold_462-1510915933:928111..928339Clytia hemisphaericaexon
TCONS_00067061-exon-scaffold_462-1575043694:928111..928339TCONS_00067061-exon-scaffold_462-1575043694:928111..928339Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:928111..928339 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	7.23684	2.28746	8.27917	9.04267	4.52213	3.36084	3.26211	4.28876	2.1414	2.22387	5.48496	2.61609	0	2.47746	2.28183	2.38777	1.0377	4.55539	2.46119	0	2.30465	8.22739	1.47167	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067061 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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