TCONS_00065878 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065878
Unique NameTCONS_00065878
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065878 ID=TCONS_00065878|Name=TCONS_00065878|organism=Clytia hemisphaerica|type=transcript|length=192bp
GATTTGCATCTCATCCAAGATTTTCCTTTTGGGGCTTCAATATGCTGTAT
AGAAAAAGATTGATTAGTCAAGGAAATTTCTTTATCAAACAAAACCCAGG
TGAAGCTAATATGAGCATTGAAGATTTGCAAGATCTTGTTAGGGATAATG
ATCACTACATAGTAATGAAAAAACTACAAAGATACTCAAAGA
Run BLAST on NCBI

transcript from alignment at scaffold_447:317927..318118

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065878 ID=TCONS_00065878|Name=TCONS_00065878|organism=Clytia hemisphaerica|type=transcript|length=192bp|location=Sequence derived from alignment at scaffold_447:317927..318118 (Clytia hemisphaerica)
TCTTTGAGTATCTTTGTAGTTTTTTCATTACTATGTAGTGATCATTATCC
CTAACAAGATCTTGCAAATCTTCAATGCTCATATTAGCTTCACCTGGGTT
TTGTTTGATAAAGAAATTTCCTTGACTAATCAATCTTTTTCTATACAGCA
TATTGAAGCCCCAAAAGGAAAATCTTGGATGAGATGCAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041276XLOC_041276Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065878-exon-scaffold_447-1491911889:317927..318118TCONS_00065878-exon-scaffold_447-1491911889:317927..318118Clytia hemisphaericaexon
TCONS_00065878-exon-scaffold_447-1510915933:317927..318118TCONS_00065878-exon-scaffold_447-1510915933:317927..318118Clytia hemisphaericaexon
TCONS_00065878-exon-scaffold_447-1575043694:317927..318118TCONS_00065878-exon-scaffold_447-1575043694:317927..318118Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_447supercontigscaffold_447:317927..318118 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065878 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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