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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065704 ID=TCONS_00065704|Name=TCONS_00065704|organism=Clytia hemisphaerica|type=transcript|length=1128bp
TCATATTGGGAATTGATTGAACCCATTGATTGAACAGAGTATTGTAATCT
TATTTCAAATTATCCTAAGCCCAGTTTAGTTAATGTGTTATgaagatttt
actttatataaaaatttgtcttcTATTTCTGGGACACACGATATCAATAT
GTTAGTAATCTCGTTGTTCTAAATTTCCAAATGAGGAAGATTTCTCgatt
ttttctcatttcctTTTCATTAAGACAATAGACTTTTAGTCCCTGTATAC
TTATCTATACCAACAAAAATGTAGTTCTGACAAGTTCACAAAATGCCGGT
CATTGCTGTGTACTTCTCTACTCTTCTGTGGCAGAGAGTCAAATGTTTGA
AAATCAATACGTCCattttaaaggggcataaaagtagtaaaatgtaaaca
atgtGCGAACCACGTGTGacattaaaatcacgtgtccaaaacaattgaaa
caatcaaaatcagccatttgtttttattttttattttgacatgtgacatt
tgttttgatattgtATCCTGCTGCATATGGTTTGTTTGCAAATTTGGTCA
TTACTTTTGTGTCCCTTTAAGGGTTTGATTGTgtagccaatcaaaataaa
ctTAACACAATACCAATAGGCTATTATTTTGACATTtataattattatat
tattgtGTGTACATTATTATTGTTTATTATTCTTATCACTGTATAATCTT
AGGTATTTTTTTACTATTATCATACTGAAACTGAAAACTGCAAACAGATG
GGCATTGtcacattttcaattataattattatattGTATAGttctatctt
tttcattttctcttttttttcagttccaaaaaaaagaagaatcatAAAAC
ATTTTAgaattattatattattgtcattataattatttctttaaactttt
agcttaaaaaaatataattgccCCCCAATATGTTTAGTTTGGcactgttt
aaaaaaaatgtaaaattttttgactaatttttagAAGGATATATGTCCAA
TTTATATTTTGGTTCTACTTTCCTCTAGACTTAGAGCTTTTATTGATGTT
TattataaattgttttttcaacaTATGCTGGACTCTTTCAAACCTAAAAT
TAGAATTTCTTGATATCGTCAATTGAGN Run BLAST on NCBI transcript from alignment at scaffold_443:317626..318753+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065704 ID=TCONS_00065704|Name=TCONS_00065704|organism=Clytia hemisphaerica|type=transcript|length=1128bp|location=Sequence derived from alignment at scaffold_443:317626..318753+ (Clytia hemisphaerica)
TCATATTGGGAATTGATTGAACCCATTGATTGAACAGAGTATTGTAATCT
TATTTCAAATTATCCTAAGCCCAGTTTAGTTAATGTGTTATgaagatttt
actttatataaaaatttgtcttcTATTTCTGGGACACACGATATCAATAT
GTTAGTAATCTCGTTGTTCTAAATTTCCAAATGAGGAAGATTTCTCgatt
ttttctcatttcctTTTCATTAAGACAATAGACTTTTAGTCCCTGTATAC
TTATCTATACCAACAAAAATGTAGTTCTGACAAGTTCACAAAATGCCGGT
CATTGCTGTGTACTTCTCTACTCTTCTGTGGCAGAGAGTCAAATGTTTGA
AAATCAATACGTCCattttaaaggggcataaaagtagtaaaatgtaaaca
atgtGCGAACCACGTGTGacattaaaatcacgtgtccaaaacaattgaaa
caatcaaaatcagccatttgtttttattttttattttgacatgtgacatt
tgttttgatattgtATCCTGCTGCATATGGTTTGTTTGCAAATTTGGTCA
TTACTTTTGTGTCCCTTTAAGGGTTTGATTGTgtagccaatcaaaataaa
ctTAACACAATACCAATAGGCTATTATTTTGACATTtataattattatat
tattgtGTGTACATTATTATTGTTTATTATTCTTATCACTGTATAATCTT
AGGTATTTTTTTACTATTATCATACTGAAACTGAAAACTGCAAACAGATG
GGCATTGtcacattttcaattataattattatattGTATAGttctatctt
tttcattttctcttttttttcagttccaaaaaaaagaagaatcatAAAAC
ATTTTAgaattattatattattgtcattataattatttctttaaactttt
agcttaaaaaaatataattgccCCCCAATATGTTTAGTTTGGcactgttt
aaaaaaaatgtaaaattttttgactaatttttagAAGGATATATGTCCAA
TTTATATTTTGGTTCTACTTTCCTCTAGACTTAGAGCTTTTATTGATGTT
TattataaattgttttttcaacaTATGCTGGACTCTTTCAAACCTAAAAT
TAGAATTTCTTGATATCGTCAATTGAGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065704-exon-scaffold_443-1491911889:317626..318753 | TCONS_00065704-exon-scaffold_443-1491911889:317626..318753 | Clytia hemisphaerica | exon |
| TCONS_00065704-exon-scaffold_443-1510915933:317626..318753 | TCONS_00065704-exon-scaffold_443-1510915933:317626..318753 | Clytia hemisphaerica | exon |
| TCONS_00065704-exon-scaffold_443-1575043694:317626..318753 | TCONS_00065704-exon-scaffold_443-1575043694:317626..318753 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_443 | supercontig | scaffold_443:317626..318753 + |
Blast
The following BLAST results are available for this feature:
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