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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065620 ID=TCONS_00065620|Name=TCONS_00065620|organism=Clytia hemisphaerica|type=transcript|length=1236bp
atttcactgaacctccaaagtcttttgatttgaggtaatgaacggcgtat
taaaaaatacatgatttctcttttgcaccaagtaggcttttaaaaattga
aatatgaaaaaaatttgtagtGAAATACATGCaagtgtctggaacgaaga
agaacaaactagtggcaaaacgatggagcgtttgacgagttaatcccatc
aggtgataggcggttaggcggcgggcgttctctaattctccaaacggcgt
ccggtcattttgaatgaaaacaaaaaagttaaaaagggcccGTTATCAGT
GAAAGTTGTCGTGACATGCTATGACAGAAAGtaagattgataaacttggt
ggagttatcaaagcaaatttgttgtcaaagagatttaacagtaagtgaaa
atacaggccagattgTCAACAGTCCCATGCTTCAACTAATTGTCCCCCAA
GTTAGAGCTTGACAGTAATATACAGCTTTTAGAGAAGAAAAATATCCAAG
AATTATCCATCAACAAGTTTATATTGAAgcaaaaaaatctcatttgatTC
ACTTTCAATCAGGCTGTCAGTTATCATCCATTCAATTGTCAGTTACCGTC
CGTCAAACACCAATAATAATCATATCCAGATATCATAACATAACTTATCA
AGCATTGCTGCTGCACATGTACGTATTACGTGATTAATATATTGTACTTG
TTGATCATCAAGCCGTTGTTCCCTTGTTTCTCCCATTTCACTTGATTAAG
CTGATATTTCTAGTCTTTACCAGCTGTGACTGTTTCATGCCATTTCCAGA
AGAATCGTGAATATTTAGGAAAAATCAAATCTTCCAGTCCTCGCTCCTCA
AGCTCAAAGCACAAAGCAACAGTGAATAGGTAGCTacagtttcaaaattt
gaagaatgagGTGCAAAACTGAACCATCATAGTTCCTAGATATATTTGTT
CTGTTTAACTGTTTTTGACAGCTGCAATGCAAGCAGGCAAGTCACAACCA
ATTCTGCTCTGATCAACAAAAAAGTGATGCTGGAGCTAGCCATTTTGAAT
ATTCTGCCTTGACATTATTTGCCAGTTTTTGTTGGATAGAAAAAACACCA
GGATAAAAAACGATAAGCAaatcaaaacaccaaaaatgtTTCCAGgtttt
ggtttggttttgttgacagaaatgttttgtttactttcttgtTGTCGGGG
GGAATCCCGATTTGCCGATTACTGACTTTCCCGCCC Run BLAST on NCBI transcript from alignment at scaffold_440:25437..26672 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065620 ID=TCONS_00065620|Name=TCONS_00065620|organism=Clytia hemisphaerica|type=transcript|length=1236bp|location=Sequence derived from alignment at scaffold_440:25437..26672 (Clytia hemisphaerica)
GGGCGGGAAAGTCAGTAATCGGCAAATCGGGATTCCCCCCGACAacaaga
aagtaaacaaaacatttctgtcaacaaaaccaaaccaaaacCTGGAAaca
tttttggtgttttgattTGCTTATCGTTTTTTATCCTGGTGTTTTTTCTA
TCCAACAAAAACTGGCAAATAATGTCAAGGCAGAATATTCAAAATGGCTA
GCTCCAGCATCACTTTTTTGTTGATCAGAGCAGAATTGGTTGTGACTTGC
CTGCTTGCATTGCAGCTGTCAAAAACAGTTAAACAGAACAAATATATCTA
GGAACTATGATGGTTCAGTTTTGCACctcattcttcaaattttgaaactg
tAGCTACCTATTCACTGTTGCTTTGTGCTTTGAGCTTGAGGAGCGAGGAC
TGGAAGATTTGATTTTTCCTAAATATTCACGATTCTTCTGGAAATGGCAT
GAAACAGTCACAGCTGGTAAAGACTAGAAATATCAGCTTAATCAAGTGAA
ATGGGAGAAACAAGGGAACAACGGCTTGATGATCAACAAGTACAATATAT
TAATCACGTAATACGTACATGTGCAGCAGCAATGCTTGATAAGTTATGTT
ATGATATCTGGATATGATTATTATTGGTGTTTGACGGACGGTAACTGACA
ATTGAATGGATGATAACTGACAGCCTGATTGAAAGTGAatcaaatgagat
ttttttgcTTCAATATAAACTTGTTGATGGATAATTCTTGGATATTTTTC
TTCTCTAAAAGCTGTATATTACTGTCAAGCTCTAACTTGGGGGACAATTA
GTTGAAGCATGGGACTGTTGAcaatctggcctgtattttcacttactgtt
aaatctctttgacaacaaatttgctttgataactccaccaagtttatcaa
tcttaCTTTCTGTCATAGCATGTCACGACAACTTTCACTGATAACgggcc
ctttttaacttttttgttttcattcaaaatgaccggacgccgtttggaga
attagagaacgcccgccgcctaaccgcctatcacctgatgggattaactc
gtcaaacgctccatcgttttgccactagtttgttcttcttcgttccagac
acttGCATGTATTTCactacaaatttttttcatatttcaatttttaaaag
cctacttggtgcaaaagagaaatcatgtattttttaatacgccgttcatt
acctcaaatcaaaagactttggaggttcagtgaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065620-exon-scaffold_440-1491911889:25437..26672 | TCONS_00065620-exon-scaffold_440-1491911889:25437..26672 | Clytia hemisphaerica | exon |
| TCONS_00065620-exon-scaffold_440-1510915933:25437..26672 | TCONS_00065620-exon-scaffold_440-1510915933:25437..26672 | Clytia hemisphaerica | exon |
| TCONS_00065620-exon-scaffold_440-1575043694:25437..26672 | TCONS_00065620-exon-scaffold_440-1575043694:25437..26672 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_440 | supercontig | scaffold_440:25437..26672 . |
Blast
The following BLAST results are available for this feature:
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