|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065349 ID=TCONS_00065349|Name=TCONS_00065349|organism=Clytia hemisphaerica|type=transcript|length=4882bpRun BLAST on NCBI transcript from alignment at scaffold_439:172342..200636+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00065349 ID=TCONS_00065349|Name=TCONS_00065349|organism=Clytia hemisphaerica|type=transcript|length=28295bp|location=Sequence derived from alignment at scaffold_439:172342..200636+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00065349 vs. Swiss-Prot (Human)
Match: SPTN1 (Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTAN1 PE=1 SV=3) HSP 1 Score: 1461.05 bits (3781), Expect = 0.000e+0 Identity = 768/1522 (50.46%), Postives = 1048/1522 (68.86%), Query Frame = 3
Query: 3 VIHPYEESNPREISVQKGQILTLLNSANPNWWKVESDDRQGFXXXXXXXXXXXXXXS--QDLL---ASIP--------------ESETILDRQRKIDQKYADLIGKAEERHNKLEESIKKNAMLREAKEIESWMTDCDAIVTSTEIGEDMDGIELQQKEYDEFKKDMQVQEERIAXXXXXXX-------XXXXXXSSEHEKVQEILTR-----------------------------VTQRWEQMDSVAKTRKEALESAAEIQRFYRDAEDTKEWINEKDAPLSSSDFGHDLASVQALQRKHEATERDLAALEEKVESLNAEAVQLCENHPNSAETIQEKAKDLSQNWSQLREKSDDRKSKLNDSYIFQKFLSDYRDQLSWIQSISALVNSDELAFDVAGAEALLDRHQEHRLEMDSREPIFDKFNEFGQSLLDERHSNSDEINVKMNEVQTAREALGIAWEKRKKILDDNMEEMLFNRDAELAESWMAAREAVLQSDDS----ESTDVLMKKQKDFEKAIAIHEAKIQTLEKTANGLIENEHYDSDVIQKRIEEVMKRWATLKEALVERRSKLGESQSLQSVSRDVDDIEGWISEKLQTALDESYKDPSNIQGKVQKHQAFEAEVAANEDRVASTIKHGRGLIRDKKCQGSEEFLEERLKGIEKSWSELIEACHLKTKKLMEANEQQKFQYGMQDLEFWLGEIENALSSDEFGKDLTSAQSLLKKHQLVEVDIGSYEDRVSSLKNQCQHFQEIQHFDAVKIEESTXXXXXXXXXXXXXXXTRKTRLEASVALHQFFRDIDDQESWIREKKVLASSQEYGIDLPDVQNLRKKMQRLNGELNSHKPIVEQLLESGQQFQENNPQQESEIQEKCNSLSEKWNELNALAEDRNNKLSDSEEYQQLLTNIHEEESWIAEKLVLVSNDDHGDTLASVLGLLKKHEAFETDYNVHQQRVDDIKTQANDLIAKENHYADSIRSDLESLETRMNELKIQGETRRQKLMDNSAFLQFNWKANVVESWIDDKENFVKSDQDPRDSSSTQNLLTRQDENGEERFFYDRSTNPNHLIQLQNTFDAGLRAFENEGIARVTSLKEELVKAEHQQTPAIIARHDGLVTRWNNLLNKANERREKLLKLQKHYQMVEDLFLLFAKKASEFNSWFENAEEDLTDPVRCNSVEQIKNLLDAHTTFRDSLDQPKANFNELVELDAEIKSYNIEVNPYAWFGMDAIEETWKNLQELIRDRENALEKETRRQDFNDELRQSFAEKANGFNRFVTDTRT------SMVDSTGTLEEQLASLKETSKVIGSKKENLGEIEDIGAQMEEAMILDNKYTDHSTVGLAQQWDQLDQLNMRMQKNLEHQIKAKNMTGVSEDTLREFNIMFKHFDKDKTGFLDHPEFKSCLRSLGYDLPVVEEGEDDSEFEAILRTVDPNGDGVVSLNEYMAFMISRETENVRSASEVEDAFRAITEGGKQAFVTEEELYMALTKEQADYCMSCMKVYVDKNGRELPGYFDYKVFVEELFV 4373
++ Y+E +PRE++++KG ILTLLNS N +WWKVE +DRQGFVPAA VKK+D +++ ++LL SI E+ ++ R +++++ Y L+ E+R LE+S KK + REA E++ W+ + +A +TS E+G D++ +E+ QK++D+F+KD++ E R+ + ++ +E ++ + ++V ++ R + +RW + +A+ R + L SA E+QRF+RDA++TKEWI EK+ L++ ++GHDLASVQALQRKHE ERDLAAL +KV SL A +L ++HP SAE +QEK +L+Q WS L +++D RK+KL DS+ Q+FLSD+RD +SWI I LV+SDELA DV GAEALL+RHQEHR E+D+R F F +FGQ LL H S EI K++ + R L AW +R+ +LD +E LF+RD E AE+WMAAREA L ++D +S + L+KK +DF+KAI + E KI L+ A+ LI HY I R EV+ RW LK ++E+RSKLGESQ+LQ SRDVD+IE WISEKLQTA DESYKDP+NIQ K QKHQAFEAE+ AN DR+ I G LI C GSE+ ++ RL + W L++ K++KL EAN+QQ F G++D +FWL E+E L+S+++GKDL S +LLKKHQL+E DI ++EDR+ L +Q FD ++++ + RF+K+K M+ +R+ +L S LHQFFRD+DD+ESWI+EKK+L S++YG DL VQNLRKK +RL EL +H+P ++ +L++G++ ++N + EIQ++ E W EL LA R +L +S EYQQ + N+ EEE+WI EK+ LV+++D+GDTLA++ GLLKKHEAFETD+ VH+ RV+D+ T DLI K NH+ ++I S ++ L ++++L+ R+ KL +NSAFLQFNWKA+VVESWI +KEN +K+D RD SS Q LLT+Q+ TFDAGL+AF+ EGIA +T+LK++L+ A+H Q+ AI ARH L+ RW+ LL + R++KLL+ Q H++ VEDLFL FAKKAS FNSWFENAEEDLTDPVRCNS+E+IK L +AH FR SL +A+FN+L ELD +IKS+ + NPY WF M+A+EETW+NLQ++I++RE L+KE RRQ+ ND+LRQ FA+ AN F++++ +TRT MV+ +GTLE QL + K + I + + L +IED+GA MEEA+ILDNKYT+HSTVGLAQQWDQLDQL MRMQ NLE QI+A+N TGV+E+ L+EF++MFKHFDKDK+G L+H EFKSCLRSLGYDLP+VEEGE D EFEAIL TVDPN DG VSL EYMAFMISRETENV+S+ E+E AFRA++ GK +VT+EELY LT+EQADYC+S MK YVD GRELP FDY F LFV
Sbjct: 974 ALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALRQEQIDNQTRITKEAGSVSLRMKQVEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDLKANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGMMPRDETDSKTASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESAEDLQEKCTELNQAWSSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQSKHQKHQAFEAELHANADRIRGVIDMGNSLIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRDTINGRFQKIKSMAASRRAKLNESHRLHQFFRDMDDEESWIKEKKLLVGSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVEHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQE-----------------------TFDAGLQAFQQEGIANITALKDQLLAAKHVQSKAIEARHASLMKRWSQLLANSAARKKKLLEAQSHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGK-PYVTKEELYQNLTREQADYCVSHMKPYVDGKGRELPTAFDYVEFTRSLFV 2471 HSP 2 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 441/1272 (34.67%), Postives = 679/1272 (53.38%), Query Frame = 3
Query: 201 SETILDRQRKIDQKYADLIGKAEERHNKLEESIKKNAMLREAKEIESWMTDCDAIVTSTEIGEDMDGIELQQKEYDEFKKDMQVQEERIAXXXXXXXXXXXXXSSEHEKVQEILTRVTQRWEQMDSVAKTRKEALESAAEIQRFYRDAEDTKEWINEKDAPLSSSDFGHDLASVQALQRKHEATERDLAALEEKVESLNAEAVQLCENHPNSAETIQEKAKDLSQNWSQLREKSDDRKSKLNDSYIFQKFLSDYRDQLSWIQSISALVNSDELAFDVAGAEALLDRHQEHRLEMDSREPIFDKFNEFGQSLLDERHSNSDEINVKMNEVQTAREALGIAWEKRKKILDDNMEEMLFNRDAELAESWMAAREAVLQSDD----SESTDVLMKKQKDFEKAIAIHEAKIQTLEKTANGLIENEHYDSDVIQKRIEEVMKRWATLKEALVERRSKLGESQSLQSVSRDVDDIEGWISEKLQTALDESYKDPSNIQGKVQKHQAFEAEVAANEDRVASTIKHGRGLIRDKKCQGSEEFLEERLKGIEKSWSELIEACHLKTKKLMEANEQQKFQYGMQDLEFWLGEIENALSSDEFGKDLTSAQSLLKKHQLVEVDIGSYEDRVSSLKNQCQHFQEIQHFDAVKIEESTXXXXXXXXXXXXXXXTRKTRLEASVALHQFFRDIDDQESWIREKKVLASSQEYGIDLPDVQNLRKKMQRLNGELNSHKPIVEQLLESGQQFQENNPQQESEIQEKCNSLSEKWNELNALAEDRNNKLSDSEEYQQLLTNIHEEESWIAEKLVLVSNDDHGDTLASVLGLLKKHEAFETDYNVHQQRVDDIKTQANDLIAKENHYADSIRSDLESLETRMNELKIQGETRRQKLMDNSAFLQFNWKANVVESW----IDDKENFVKSDQ----DPRDSSSTQNLLTRQDENGEERFFYDRSTNPNHLIQLQNTFDAGLRAFENEGIARVTSLKEELVKAEHQQTPAIIARHDGLVTRWNNLLNKANERREKLLKLQKHYQMVEDLFLLFAKKASEFNSWFENAEEDLTDPVRCNSVEQIKNLLDAHTTFRDSLDQPKANFNELVELD--------------------------------------AEIKSYNIEVNPYAWF-GMDAIEETWKNLQELIRDRENALEKETRRQDFN---DELRQSFAEKANGFNRFVTDTRTSMVDSTGTLEEQLASLKETSKVIGSKKENLGEIED--IGAQMEEAMILDNKYTDHSTVGLAQQWDQL 3848
SETI R ++ +++ L+ K E+ KL ++ K LRE +++ W+ D +AIVTS E+G+D++ +E+ QK+++EF+ DM EER+ ++ Q +L +E+ E E ++ V W+++ +A R+ L AAE+QRF RD ++T WI EK+ ++S DFG DLASVQAL RKHE ERDLAALE+KV++L AEA +L ++HP SA IQ K ++L NW Q+R + +R ++LNDSY Q+FL+D+RD SW+ + AL+N+DELA DVAGAEALLDRHQEH+ E+D+ E F +E GQ+LL H SDE+ K+ + R AL WE R++ + M+ LF RD E ++WM+ +EA L ++D +S + L+KK +DFEK+++ E KI L++ A LI+N HY + + R + ++ R L E + RR++L +S LQ RD D+++ W++EK++TA DE+YKDPSN+QGKVQKHQAFEAE++AN+ R+ + K G+ LI D +E + R+ + W +L+EA LK KL EAN+QQ+F ++D+E WL E+E L+SD++GKDLT+ Q+L KKH L+E D+ +++DR+ + Q + FQ+ HFDA I++ + +V R+E +K V RK +L S+ L Q FRD++D+E+WIREK+ +A+S G DL VQNL KK Q L E+ H+P ++ + + G E +++ K + L++KW L A A R L DS + QQ + +E ESW+ EK +V + D+G S LLKKHEA +D + + + ++ QA + D +L + Q ++ R+ M L N + W ++D++ FV + DP S+S +NLL Q G A E I T + +E ++ R + +++LL +R+ L K K F+LF ++A+E W E LT +EQ++ L F+ L KAN + L +++ + KS + V+ A F + + E W++LQ+L +R L Q F+ DE ++ EK N TD + S L+ + + +G K +LGE + I + E A L K T+ L Q W L
Sbjct: 117 SETIRTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQDLEHVEVLQKKFEEFQTDMAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSATQIQVKREELITNWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELASDVAGAEALLDRHQEHKGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLTVLSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLI-DVNHYAKDE-VAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKAKLHELNQKWEALKAKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQVAPTDDETGKEL-----VLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLDPAQSASRENLLEEQ----------------------------GSIALRQEQIDNQTRITKE--------AGSVSLRMKQVEELYHSLLELGEKRKGMLEKSCKK-------FMLF-REANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDL---KANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGMMPRDETDSKTASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALN---TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESAEDLQEKCTE-----LNQAWSSL 1324 HSP 3 Score: 274.248 bits (700), Expect = 5.428e-74 Identity = 233/927 (25.13%), Postives = 461/927 (49.73%), Query Frame = 3
Query: 201 SETILDRQRKIDQKYADLIGKAEERHNKLEESIKKNAMLREAKEIESWMTDCDAIVTSTEIGEDMDGIELQQKEYDEFKKDMQVQEERIAXXXXXXXXXXXXXSSEHEKVQEILTRVTQRWEQMDSVAKTRKEALESAAEIQRFYRDAEDTKEWINEKDAPLSSSDFGHDLASVQALQRKHEATERDLAALEEKVESLNAEAVQLC-ENHPNSAETIQEKAKDLSQNWSQLREKSDDRKSKLNDSYIFQKFLSDYRDQLSWIQSISALVNSDELAFDVAGAEALLDRHQEHRLEMDSREPIFDKFNEFGQSLLDERHSNSDEINVKMNEVQTAREALGIAWEKRKKILDDNMEEMLFNRDAELAESWMAAREAVLQSD----DSESTDVLMKKQKDFEKAIAIHEAKIQTLEKTANGLIENEHYDSDVIQKRIEEVMKRWATLKEALVERRSKLGESQSLQSVSRDVDDIEGWISEKLQTALDESYKDP-SNIQGKVQKHQAFEAEVAANEDRVASTIKHGRGLIRDKKCQGSEEFLEERLKGIEKSWSELIEACHLKTKKLMEANEQQKFQYGMQDLEFWLGEIENALSSDEFGKDLTSAQSLLKKHQLVEVDIGSYEDRVSSLKNQCQHFQEIQHFDAVKIEESTXXXXXXXXXXXXXXXTRKTRLEASVALHQFFRDIDDQESWIREKKVLASSQEYGIDLPDVQNLRKKMQRLNGELNSHKPIVEQLLESGQQFQENNPQQESEIQEKCNSLSEKWNELNALAEDRNNKLSDSEEYQQLLTNIHEEESWIAEKLVLVSNDDHGDTLASVLGLLKKHEAFETDYNVHQQRVDDIKTQANDLIAKENHYADSIRSDLESLETRMNELKIQGETRRQKLMDNSAFLQFNWKANVVESWIDDKENFVKSDQDPRDSSSTQNLLTRQD 2963
+E I +R++++ +Y + R KLE+S + R+A+E+E W+ + + S E +D ++ + +++ F+ ++Q I KL + + E E ++ L + ++WE + + + L A ++ ++ R+ ED +WIN+K+A ++S + G DL V+ LQ+K E + D+AA EE+V +N A +L E HP E I+ K +++ W +L+ + R+ KL + Q+F D + +SWI+ L+ SD+ D+A +ALL +H+ ++ + E L ++ +I VK E+ T E + +R L+D+ F D SW+ +A++ +D D + L+ + ++ + I HE ++ +++ L+ HY SD +++++ + + A L E RR + + LQ RD + ++ W+S++ L+E D +++ ++KH+ FE ++A E+++ + + LI++ + E + R + + L E + +L ++ Q+F +L+ W+ E + ++DE KD ++ Q ++KHQ E ++ + + R+ +L+ Q ++ H+ ++ V+ ++K+ + + +L + QF R+++D E W+ E + +S +YG DL +VQNL+KK L ++ +H+ ++ + +QFQ+ I++K +L ++ L R KL+DS QQL ++ +EE+WI EK + ++ + G L V LLKKH+A + + H+ R+ + + N ++ + + A+ +++ L L + LK + RRQ L D+ Q+ AN ESW+ +KE V S +D S + LL + +
Sbjct: 12 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQE-KLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQDLEHVEVLQKKFEEFQTDMAAHEERVNEVNQFAAKLIQEQHPEE-ELIKTKQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSATQIQVKREELITNWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELASDVAGAEALLDRHQEHKGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLTVLSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHY--AMEDVATRRDALLSRRNALHERAMRRRAQLADSFHLQQFFRDSDELKSWVNE-KMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKAKLHELNQKWEALKAKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHE 933 HSP 4 Score: 228.794 bits (582), Expect = 5.634e-60 Identity = 190/743 (25.57%), Postives = 361/743 (48.59%), Query Frame = 3
Query: 195 PESETILDRQRKIDQKYADLIGKAEERHNKLEESIKKNAMLREAKEIESWMTDCDAIVTSTEIGEDMDGIELQQKEYDEFKKDMQVQEERIAXXXXXXXXXXXXXSSEHEKVQEILTRVTQRWEQMDSVAKTRKEALESAAEIQRFYRDAEDTKEWINEKDAPLSSSDFGHDLASVQALQRKHEATERDLAALEEKVESLNAEAVQLCENHPNSAETIQEKAKDLSQNWSQLREKSDDRKSKLNDSYIFQKFLSDYRDQLSWIQSISALVNSDELAFDVAGAEALLDRHQEHRLEMDSREPIFDKFNEFGQSLLDERHSNSDEINVKMNEVQTAREALGIAWEKRKKILDDNMEEMLFNRDAELAESWM------AAREAVLQSDDSESTDVLMKKQKDFEKAIAIHEAKIQTLEKTANGLIENEHYDSDVIQKRIEEVMKRWATLKEALVERRSKLGESQSLQSVSRDVDDIEGWISE-KLQTALDESYKDPSNIQGKVQKHQAFEAEVAANEDRVASTIKHGRGLIRDKKCQGSEEFLEERLK----GIEKSWSELIEACHLKTKKLMEANEQQKFQYGMQDLEFWLGEIENALSSDEFGKDLTSAQSLLKKHQLVEVDIGSYEDRVSSLKNQCQHFQEIQHFDAVKIEESTXXXXXXXXXXXXXXXTRKTRLEASVALHQFFRDIDDQESWIREKKVLASSQEYGIDLPDVQNLRKKMQRLNGELNSHKPIVEQLLESGQ 2390
PE E I +Q +++ + L G A +R KL + + R+ E SW+ + + ++ S + G D+ ++ ++++ ++D+ E+++ L +L++ ++Q + WEQ+ ++A R L + +QRF D D W+ E A +++ + D+A +AL +H+ + ++ A E+ +S + L +++ ++EK LS+ + L E + R+ + Q F D +W+ A + +++L + EALL +H++ + ++E +EF L+ H +++ + + + + R AL +R+ L D+ F RD++ +SW+ A EA D + ++K + FE ++ ++++I LEK LI+ HY D + R+ EV+ W L EA + KL E+ Q +R+V+DIE W+ E + A D+ KD +N+Q +KH EA+VAA++DR+ I+ ++ Q + F E +K + + L E + +KL ++ Q+ ++D E W+ E E +S GKDL Q+LLKKHQ ++ +I +E R+ ++ + E HF A ++ + ++E +K + R+ LE S+ Q+F D ++ ESW+REK+ + S +YG D + L KK + L +L+++ ++ L E Q
Sbjct: 221 PEEELIKTKQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSATQIQVKREELITNWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELASDVAGAEALLDRHQEHKGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLTVLSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEAY---KDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRIDGIT------IQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKAKLHELNQKWEALKAKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQ 954 HSP 5 Score: 223.402 bits (568), Expect = 2.221e-58 Identity = 232/945 (24.55%), Postives = 435/945 (46.03%), Query Frame = 3
Query: 834 SAETIQEKAKDLSQNWSQLREKSDDRKSKLNDSYIFQKFLSDYRDQLSWIQSISALVNSDELAFDVAGAEALLDRHQEHRLEMDSREPIFDKFNEFGQSLLDERHSNSDEINVKMNEVQTAREAL-------GIAWEKRKKILDDNMEEMLFNRDAELAESWMAAREAVLQSD----DSESTDVLMKKQKDFEKAIAIHEAKIQTLEKTANGLIENEHYDSDVIQKRIEEVMKRWATLKEALVERRSKLGESQSLQSVSRDVDDIEGWISEKLQ-TALDESYKDPSNIQGKVQKHQAFEAEVAANEDRVASTIKHGRGLIRDKKCQGSEEFLEERLKGIEKSWSELIEACHLKTKKLMEANEQQKFQYGMQDLEFWLGEIENALSSDEFGKDLTSAQSLLKKHQLVEVDIGSYEDRVSSLKNQCQHFQEIQHFDAVKIEESTXXXXXXXXXXXXXXXTRKTRLEASVALHQFFRDIDDQESWIREKKVLASSQEYGIDLPDVQNLRKKMQRLNGELNSHKPIVEQLLESGQQFQENNPQQESEIQEKCNSLSEKWNELNALAEDRNNKLSDSEEYQQLLTNIHEEESWIAEKLVLVSNDDHGDTLASVLGLLKKHEAFETDYNVHQQRVDDIKTQANDLIAKENHYA-DSIRSDLESLETRMNELKIQGETRRQKLMDNSAFLQFNWKANVVESWIDDKENFVKSDQDPRDSSSTQNLLTRQDENGEERFFYDRSTNPNHLIQLQNTFDAGLRAFENEGIARVTSLKEELVKAEHQQTPAIIARHDGLVTRWNNLLNKANERREKL---LKLQKHYQMVEDLFLLFAKKASEFNSWFENAEEDLTDPVRCNSVEQIKNLLDAHTTFRDSLDQPKANFNELVELDAEIKSYNIEVNPYAWFGMDAIEETWKNLQELIRDRENALEKET-RRQDFNDEL--RQSFAE 3611
+AE IQE+ + + + + +E S R+ KL DSY FQ F D + WIQ + SDE D + L +HQ E+ + K +E G ++ E H S+ I ++ E+ E L GI + +K++ + R+ E W+ +EA++ S+ D E +VL KK ++F+ +A HE ++ + + A LI+ +H + ++I+ + +EV W LK ++R+ KL + +Q +RDVD+ WI EK Q A D+ +D +++Q ++KH+ E ++AA ED+V + L + ++ ++ + + + +W ++ + +L ++ Q+F +DL W+ E++ +++DE D+ A++LL +HQ + +I ++ED S Q H+ + ++ E V+ + + R+ + E + L F+RD + ++W+ +++ +++ G L V+ L KK + L++ + + L E + +NN ++ + ++L + N L+ A R +L+DS QQ + E +SW+ EK+ +++ + D +++ G ++KH+AFE + + +Q R+D ++ LI NHYA D + + + + + +L E + KL + + QFN +E W+ + E + SD +D ++ QNL H + +A + A ++ I +T + A H I + + LV R+ L R++KL L+LQ+ ++ VED +W E R + ++NLL H + E+ + IK+ + N G A E+ L EL + E K + RRQD D L +Q FA+
Sbjct: 11 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQE-KLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLLQAQKLVQ-------YLRECEDVMDWINDKEAIVTSEELGQDLEHVEVLQKKFEEFQTDMAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSATQ--IQVKREELITNWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELASDVAGAEALLDRHQEHKGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLTVLSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEAYKDP-SNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLI-DVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNL------------------QKKHAL-----LEADVAAHQDR-IDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKLADSLRLQQLFRDVED-----------EETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQ----------AEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKAKLHELNQKWEALKAKASQRRQDLEDSLQAQQYFAD 898 The following BLAST results are available for this feature:
BLAST of TCONS_00065349 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2024, MARIMBA.