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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065333 ID=TCONS_00065333|Name=TCONS_00065333|organism=Clytia hemisphaerica|type=transcript|length=1050bp
GTGCGAAtagatgatggttcaacgccgtgAAGAAGAGGCTTTGtagaact
ttgttaaatttccgaaaactttttacaaaacgattgtgtaatttctagga
ccgaaaaacttaattttttgtagtgattcttgataaaatttagataactt
tgaattttataacactttgcGATAATTGAAATTCTCGAAATTAGGTATta
tatgaaagaacatttataagaggttgtaaaaaagtgaactaaACAATATC
AAATTAAGTTTGGTGGCTAAGAGAGCCCATAGTGCatctttgtaggtttt
aaggggtatccactggtacttctagattttcaaaagacatttcATCATAG
AGAGCTATGCTTTGACAAAAGAATGTCTGATGGACtaaactgaaaatggc
taaactCATTCTACTGTACTAGATAACATCTTAATAATAATTCTAACCAA
TCCCTGAGAtaaagttaaaattaaaatttcaatttcaatttccagttttt
ccagctttCCTGTTTGGAAAATGTACCgatttccagtttttccagctagt
tttcagaaaaaggcCATTTTCCCAGTTTTTCCATAGGTTTTCCAGCATGC
GTGACCACCCTGTTTTTATCATACACCCTAACTTGGTCCTGAGATATTCT
TGTAATAGTGTACACAAACTCCAAGATAAATTGcatcaaaattcaattat
aatGATCTCCCTTAAACGGTGACGCACGCCTTTTACACACAGTATCACAA
ACCCGaaggattaaaaaaaaaataccgtagaaaaatcaatataaaagggg
ttgcgcgcACAAAAATACTCTGAGCTGTTGCTGGAAAACCTTTGATTTTG
AGAATTCCTACTGGATTCATCTCTTTCACTGACTAAAACGTTTCCTACGG
GTAGATGAGACAGGGGGTGTCCTTATTGTATACCACCAACCACACTCTTG
AAATTCAAACTTTACAGTGAACTTACATTATGATCAGAGCTGATCAATCG
GAAAGCAGAAGTAACAGCTTCTGCAGTAGCACCACCACCCACATCCAAAA Run BLAST on NCBI transcript from alignment at scaffold_438:8..1057 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065333 ID=TCONS_00065333|Name=TCONS_00065333|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at scaffold_438:8..1057 (Clytia hemisphaerica)
TTTTGGATGTGGGTGGTGGTGCTACTGCAGAAGCTGTTACTTCTGCTTTC
CGATTGATCAGCTCTGATCATAATGTAAGTTCACTGTAAAGTTTGAATTT
CAAGAGTGTGGTTGGTGGTATACAATAAGGACACCCCCTGTCTCATCTAC
CCGTAGGAAACGTTTTAGTCAGTGAAAGAGATGAATCCAGTAGGAATTCT
CAAAATCAAAGGTTTTCCAGCAACAGCTCAGAGTATTTTTGTgcgcgcaa
ccccttttatattgatttttctacggtattttttttttaatccttCGGGT
TTGTGATACTGTGTGTAAAAGGCGTGCGTCACCGTTTAAGGGAGATCatt
ataattgaattttgatgCAATTTATCTTGGAGTTTGTGTACACTATTACA
AGAATATCTCAGGACCAAGTTAGGGTGTATGATAAAAACAGGGTGGTCAC
GCATGCTGGAAAACCTATGGAAAAACTGGGAAAATGgcctttttctgaaa
actagctggaaaaactggaaatcGGTACATTTTCCAAACAGGaaagctgg
aaaaactggaaattgaaattgaaattttaattttaactttaTCTCAGGGA
TTGGTTAGAATTATTATTAAGATGTTATCTAGTACAGTAGAATGagttta
gccattttcagtttaGTCCATCAGACATTCTTTTGTCAAAGCATAGCTCT
CTATGATgaaatgtcttttgaaaatctagaagtaccagtggatacccctt
aaaacctacaaagatGCACTATGGGCTCTCTTAGCCACCAAACTTAATTT
GATATTGTttagttcacttttttacaacctcttataaatgttctttcata
taATACCTAATTTCGAGAATTTCAATTATCgcaaagtgttataaaattca
aagttatctaaattttatcaagaatcactacaaaaaattaagtttttcgg
tcctagaaattacacaatcgttttgtaaaaagttttcggaaatttaacaa
agttctaCAAAGCCTCTTCTTcacggcgttgaaccatcatctaTTCGCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065333-exon-scaffold_438-1491911889:8..1057 | TCONS_00065333-exon-scaffold_438-1491911889:8..1057 | Clytia hemisphaerica | exon |
| TCONS_00065333-exon-scaffold_438-1510915933:8..1057 | TCONS_00065333-exon-scaffold_438-1510915933:8..1057 | Clytia hemisphaerica | exon |
| TCONS_00065333-exon-scaffold_438-1575043694:8..1057 | TCONS_00065333-exon-scaffold_438-1575043694:8..1057 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_438 | supercontig | scaffold_438:8..1057 . |
Blast
The following BLAST results are available for this feature:
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