TCONS_00064837 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064837
Unique NameTCONS_00064837
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2886

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064837 ID=TCONS_00064837|Name=TCONS_00064837|organism=Clytia hemisphaerica|type=transcript|length=2886bp
CAGATGGAGACCGATTTCTTGGTTGAGGTTCAAAACGAACAAGTCAACGT
TGAACTCCAACAAGCCAACATCCGAACCGAATTACAAAGTAGTATCTCCG
GTGGTATCTCTGATGGCAAATGGCACACTCTCACATTGACCATTGAAGAT
GGAGATAAGATTTCGTTATACCTTGGAACAGATGACGGTCTTGTAAAGAG
CTCCAAACCTTTACCTAAAGCTGAAGTTACACTTGAAGGAGATATGTTTT
TCGGAGGTTTAGAGGATCAGAATAATGGATTCAATGGAAATATCCGACAA
GTCTACATGTGTGGAAGTGAAATGAACCTTGCACAAGACTTGGAGAATCT
GAAAGGTGGAACACAAGTTGGAGGAAACATTTTGAACGCCCCTCTTGCTC
TCCCACCACGCCCAACCCTGCCGCCACCAACCACCATTCCGCCAACTACA
ACCACAACCACAACCACAACCACAACTACGACGACCACTGCTGCTCCTAC
GACAACAACAACAACTCAACCTCCTATCTTAACCACCACAACTACCACTA
CTGTTCCACCTACCACCACTCCTGAACCAGACACCACTACTCCTGAAACA
GTCACTACCACTCAGGAGCCAGCCACTAGCACCCCAGAGGCTACCACCAC
ACCTGTGGAAACCACAACAGAATTCATCGTTGGACCAATTGAAGACACAA
CCACAACAACAGCGTCGACCACCACCACAACTACAACAACTACCACCACT
CCCGAGGTAACCACCACTCCTGAACCAGCTACCACCACTCCTGAACCAGC
TACCACCACTCCTGAACCAGCTACCACTACCCCTGAACCAGCTACCACTA
CTCCGGAACCAGCAACCACAACTCCTGAACCAGCCACTACCACTCCAGAA
CCTGAAACCACTACTCCGGAGCCTACCACGACTACCACCACGACAACAAC
TACTACTACTACAACCACCACCACCACCACCACCACCACCCCAGCTCCTA
CCACGACTGCAGCTCCTCAATGCTCCAGCAAATTGGTGCCTGTTGCCAAT
GCTTATGGTTTTGGTTTCGAAGATGAAAGCTACATCGAGTTTGGAGTGAT
GAAAGGAAAACTAGATACCAAGGCGGATTAcgaattctcattttacacaa
TGGAAGAAGAAGGTTTATTGATGTCAGGTTTTATGAAGAGTCCTTACGAT
TACGAAGCTATCTATTTAGCTGGTGGAAAAGCCCACTACATTTTCAATGC
TGGTGCAGGCTCCTTGACTTTGTCATCCAAGAGTACCGTCAATGATGGAA
AATGGCATACTATCAAAGCGACACGTTCTAAGAGAGCTGGAACGTTGTAC
GTTGATGGAGATATTGCAGCTGTCGGTGAATCAAAACCAGGAGCATCTGC
TGTCAACAACATTAACAAAGTCTACTTTGGTGGATTGCCCTCCACTTCGC
TTGTCATCCCTAAAACTCCGAAAACATCTCAAATTCCACTGAAAGGAGGA
ATGAAGGACTTTAAACTTTTCAACGAAGCTCTGGTCACGCCTGCTGCTAG
TGTTGGAACGTCACCAGCGTACAACGGATTGCCATATGTTAACGCTGTCT
CCTTTGGTGCCAATGGTGGATTTGCCCAGAAATTCAAGCAATTGAAAATC
GGACAAAATTTCAAGATCTCATTCGACGTCCGTGCGGCTAACAAAGCCGG
CTCCCTCTTTTACGTGTACGGAGGAGGTGATCATTTGTCCGTCACCGTCG
AAGAAAACGGTTCGATCAAGGTGACGTGTAACAACGGTGGAGGGTTGTTC
TCCGTGGCGTACAAACCGGAACCTTCCGTTTGCAACGGTGATATTTACAG
TGTGCTTGtggagaagaaaatgaaaacattaaaattgACAGTCAATGGTG
CCGTGACCGAAGAAACGACCACCAAATCAAGCACGTCTGCTGACACCAAC
TCGCCCGCTTACTTTGGTGGACTTCCAGACAATTTGAGATCAAACTGGTC
CAAGATTTCTGACAGCAAAGACTACAAGCCCTTCGAAGGTTGTATCAGCA
AAGTGGAAATTAATGACGAAGCTATCGACTTCacaagtgacgtcatcaaa
aatggcGCCGTCATGACGGGATGTCCTGAATGAACAAGAATGATGGAAAA
ATTTTGActtgttacaattttttttacaattttttagattatttttcata
tttacttagattaccttttttgaaaatatagcaCAGCGGAAGCACAACTA
TACCTGGCTTCGCtaaaacaatttattttttcagtgTACTTCAAACGCAG
GAATAAAATAAGTGTTTCGATTTAAAGTCGTCAATTTTTCCGACTGAATA
AAATTTAAAGGgcagagttttttattttttcgctgtGCTATACATTTATA
CATTTATTATTATCtctattttcagtttttccgTCTTTCTATAAACTGGT
ATGCTCTCCAAACGAACAGGTGTCGATACCTTTTACGCCGCCCCTCCGCC
CCTAAACAATATGCTATGTAAAAAATCTGTATTGGTATAAAAAGCAtaga
aaatgacttttttcaaacttcttctTAGTACCTTagaccatagaggtata
aagaaNACATGCTTAGACCTAATACCTTTGCAAATTTTTACTTACAAAGC
ATATCAGTATTTTCATTGGAACAACTTATTTTCAACAaggttttcgattt
ttttttcagccgaTGGAAAGGAGATCATTAGAATTTTGCCATGAAAGCTA
ATTTTTCGAGAAATAAGTTGTTTCCTTTTTACaccttttagcaaaaaaaa
aacccgcaaaattatttttgttgatgAATTTATGCAGTTATTGTAAACAG
TTTTTTTAACatctttttgtttattctgaaaaattt
Run BLAST on NCBI

transcript from alignment at scaffold_425:70581..77820+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064837 ID=TCONS_00064837|Name=TCONS_00064837|organism=Clytia hemisphaerica|type=transcript|length=7240bp|location=Sequence derived from alignment at scaffold_425:70581..77820+ (Clytia hemisphaerica)
CAGATGGAGACCGATTTCTTGGTTGAGGTTCAAAACGAACAAGTCAACGT TGAACTCCAACAAGCCAACATCCGAACCGAATTACAAAGTAGTATCTCCG GTGGTATCTCTGATGGCAAATGGCACACTCTCACATTGACCATTGAAGAT GGAGATAAGTAAGTCTGCATTGAATTACCTCTTATTTGAGTCTGGCTAAC AGAGAcgcgaaagaaaattctttgtacttctttttctctttcttctaTCT GGTAATAACCTTGATGAACAATAAAATGCCTATGAGATTGACCCGGCTGA ATATTGTTCAACATAAGGAGAAGTTTCTCAGAACACCTTCAATGGAGCAC TCTATTGATCTTTTCTTCTCAGGATTTCGTTATACCTTGGAACAGATGAC GGTCTTGTAAAGAGCTCCAAACCTTTACCTAAAGCTGAAGTTACACTTGA AGGAGATATGTTTTTCGGAGGTTTAGAGGATCAGAATAATGGATTCAATG GAAATATCCGACAAGTCNGGAAGGAGATATGTTTTTCGGAGGTTTGCAGG ATCAGAATAATGGATTCAATGGAAACATCCGACAAGTCTACATGTGTGGA AGGTAGGCTGCTTTACATAGcatgttttgttttcatttaaaaggCAAATT GATTTGTTAGGAATGATCTCCTTGGTTTAAATTTTAGGTTCTTTGTTTCT ATATATCTAGTTGGTTGAACTAGAATTATTTAGCTGCATTCATTTCCAAG TCTGCTCAACGTCTTCAaaagattttactttttgtttcCACAGTGAAATG AACCTTGCACAAGACTTGGAGAATCTGAAAGGTGGAACACAAGTTGGAGG AAACATTTTGAACGCCCCTCTTGCTCTCCCACCACGCCCAACCCTGCCGC CACCAACCACCATTCCGCCAACTACAACCACAACCACAACCACAACCACA ACTACGACGACCACTGCTGCTCCTACGACAACAACAACAACTCAACCTCC TATCTTAACCACCACAACTACCACTACTGTTCCACCTACCACCACTCCTG AACCAGACACCACTACTCCTGAAACAGTCACTACCACTCAGGAGCCAGCC ACTAGCACCCCAGAGGCTACCACCACACCTGTGGAAACCACAACAGAATT CATCGTTGGACCAATTGAAGACACAACCACAACAACAGCGTCGACCACCA CCACAACTACAACAACTACCACCACTCCCGAGGTAACCACCACTCCTGAA CCAGCTACCACCACTCCTGAACCAGCTACCACCACTCCTGAACCAGCTAC CACTACCCCTGAACCAGCTACCACTACTCCGGAACCAGCAACCACAACTC CTGAACCAGCCACTACCACTCCAGAACCTGAAACCACTACTCCGGAGCCT ACCACGACTACCACCACGACAACAACTACTACTACTACAACCACCACCAC CACCACCACCACCACCCCAGCTCCTACCACGACTGCAGCTCCTCAATGCT CCAGCAAATTGGTGCCTGTTGCCAATGCTTATGGTTTTGGTTTCGAAGAT GAAAGCTACATCGAGTTTGGAGTGATGAAAGGAAAACTAGATACCAAGTA AGCTTCATCTTCAAAATGTCTGTTTGTCTAGATGAGTGAGAAAATGAAAC ACAAAAAATGTTACTTTTAGTAATTTAAATTAAGGTTTAGTTCAAAACAA TCAAGTGGCGATAGTGGGTTTTACCTTATAGGAATCAATGACAACGCAAA CTCGTTAAAAGAACTCTATGTAAACGTCTCTAGGTTTTCCAGTACGACCC CGTAGTTTTTGCTCATAATAGCAAGGAAAGACTACACTTTTATGAACAGA CTTTAGGTATTTCTAGATTATTCAACACGGCTCTTTTCTTTCATTCNATA GCAAGGAAAGACTACACTTTTATGAACAGATTTTAGGTATTTCTAGATTA TTCAACACGGCTCCTTTCTTTCATTCAACAGGGCGGATTAcgaattctca ttttacacaaTGGAAGAAGAAGGTTTATTGATGTCAGGTTTTATGAAGAG TCCTTACGATTACGAAGCTATCTATTTAGCTGGTGGAAAAGCCCACTACA TTTTCAATGCTGGTGCAGGCTCCTTGACTTTGTCATCCAAGAGTACCGTC AATGATGGAAAATGGCATACTATCAAAGCGACACGTTCTAAGAGAGCTGG TTAGTTTTATACTTTCGATATTttcgagtttatgtatttgcactttttag GACGGCGGAGTGAAAGAAGCGATTTGATATAACACGCAGTTTTGATATGC AAAAATTGAAGAGGGTAAAAGTGCTTTTTTACCGTTGTCTTCATTTGATC CAGAGGACTGTAAAGAGatgaaaaaaaagcttttctgattactcaaagtt caacgatcacttcttttgaaaattctattgtaaaaacgttgattaggtca ttaaacgaaagtccagaaaaggaggctcgccatacaaatcggacggtttc tataTGGTTAGACgataaatatgaaaatttgtttttcctttttcgccgat tactagttcaatctTAAAGAACAAGGAACaatttttttaccaatgtatag caaaagaaattcttaacgcaatgatattaaattgattcttgtaaaactgt cagaaatcagtaaaatcaagatgaagttatattTTTGCTCGAGCTCTAGA TTTCCATACAATTGTGtgtgatgcggttatatcagtggaatcgctaggaa attcttagcaagaagatataggtaccttttctaataggagaggtgtaccc aaaatataagtcCTAAAAGtctgcgcataatcaggcttgaaacaaaagaa ttttgtcacaacacgctaattatgcagatttttcatagcgacaacaaaag aaacctattaactcgacataaactcccttaatggcaagagacctggtata cggcgagccgtttttccattgttttcaagacactgtttttccatctcttt acatttcTCTGTTTGATCAGGATCTAGACTAAATAGAAGCTAACCGTCTT CGTTCCAGAACAacacaaatacataaactcgataTTACCACTGATATTAT ACCACTTACCAATGTTTTGGAAATACTTGATATCGAATAATAATCTGGCT GAAAAGAGTATAAAAATTACAGCATTTACATTTTCCATCATTTCAGGAAC GTTGTACGTTGATGGAGATATTGCAGCTGTCGGTGAATCAAAACCAGGAG CATCTGCTGTCAACAACATTAACAAAGTCTACTTTGGTGGATTGCCCTCC ACTTCGCTTGTCATCCCTAAAACTCCGGTAAGTTCCGAATCGTCAACTTT TAGTTTTAAACATTCATACCAGCAAAATCATTCCAAGATTTCCATTATCC AACGACCTCCATTACATCATATTAGAAGCGTTAAATTGTCTTGTAGGGGT TTCAATCAGTTTGCAATGAATCATAGGAATGAGCTCTAACAATAGCTCCC GGTTCACCAGACATTATAAAAGTCTATTGGACGTGCGGTGTTCCTGGCTT CCCACAATGCATTGGAGCAGTGAAGCAGCTTATGTCTANTGGTATACggc gagccgtttttccattgttttcaagacactgtttttccatctctttacat ttcTCTGTTTGATTAGGATCTAGACTAAATAGAAGCTAACCGTCTTCGTT CCAGAACAacacaaatacataaactcgataTTACCACTGATAATATACCA CTTACCAATGTTTTGGGAATACTTGATATCGAATAATAATCTGGCTGAAA AGAGTATAAAAATTACAGCATTTACATTTTCCATCATTTCAGGAACGTTG TACGTTGATGGAGATATTGCAGCTGTCGGTGAATCAAAACCAGGAGCGTC TGCTGTCAACAACATTAACAAAGTCTACTTTGGTGGATTGCCCTCCACTT CGCTTGTCATCCCTAAAACTCCGGTAAGTTCCGAATCGTCAACTTTTAGT TTTAAACATTCATACCAGCAAAATCATTCCAAGATTTCCATTATCCAACG ACCTCCATTACATCATATTAGAAGCGTTAAATTGTCTTGTAGGGGTTTCA ATCAGTTTGCAATGAATCATAGGAATGAGCTCTAACAATAGCTCCCGGTT CACTAGACATTATAAAAGTCTATTGGACGTGCGGTGTTCCTGGCTTCCCA CAATGCATTGGAGCAGTGAAGTAGCTTATGTCTACCACATTATCGAAATT CGAAAAATCCCTTAACAAGATATATTGGTTGTCAATGTCAATTAACTTTT GTGTCGTGCAAAAATTAACGAATCTCTTTTTTCTTGTCCACAGAAAACAT CTCAAATTCCACTGAAAGGAGGAATGAAGGACTTTAAACTTTTCAACGAA GCTCTGGTCACGCCTGCTGCTAGTGTTGGAACGTCACCAGCGTACAACGG ATTGCCATATGTTAACGCTGTCTCCTTTGGTGCCAATGGTGGATTTGCCC AGAAATTCAGTAAGTTTGAATTTATTTACAATATACTCTTGAAAGTACTC AATATGTTTAGAAACTCAACAATAGGGGATATACTCTTTTTGTCCGCTTA AGACGTTTTCTGTTTTAGACAACAAATCTTTAGAAAACCTCCTCGAAAAT CATTCTTCTATCGCCTTTTAGTTCGATTAATTCATTGTTTTATCCCTCAT AATATCATTTACTCTCCattcttgaatttttgaaataatttgcaTCTTTC TTATCAGAGCAATTGAAAATCGGACAAAATTTCAAGATCTCATTCGACGT CCGTGCGGCTAACAAAGCCGGCTCCCTCTTTTACGTGTACGGAGGAGGTG ATCATTTGTCCGTCACCGTCGAAGAAAACGGTTCGATCAAGGTGACGTGT AACAACGGTGGAGGGTTGTTCTCCGTGGCGTACAAACCGGAACCTTCCGT TTGCAACGGTGATATTTACAGTGTGCTTGtggagaagaaaatgaaaacat taaaattgACAGTCAATGGTGCCGTGACCGAAGAAACGACCACCAAATCA AGCACGTCTGCTGACACCAACTCGCCCGCTTACTTTGGTGGACTTCCAGA CAATTTGAGATCAAACTGGTCCAAGATTTCTGACAGTAAGTTTTTCAGAC CCTTCATAAAATTTGTCTTCTCCGTTCGTAACGTCCCTTCTACTAGATGA TGCTATCGTCTGTTACAaggatagtaaaggcgggaagaTGTGAATGCGCA GACTTTACAGCCATTTctgcggtatacggaaaaagtCGGCGCTAGAGCTT CGAAGAAAGACAGTCAAACTCTAGCGGCTGTAAACTATTtatggcaaaaa aaaacatatatttgTGAATTTTCTTCGACTTTgagcttatttcttagata gtgatttgtcttagactatagcatagccTACCCTCCTACTATCTTCCTAT CTGCCTTGTTTTAAAACAGAAACTTGATTCATTTTCTCAACCTATATCCT TGCTTCATTCTTAGGCAAAGACTACAAGCCCTTCGAAGGTTGTATCAGCA AAGTGGAAATTAATGACGAAGCTATCGACTTCacaagtgacgtcatcaaa aatggcGCCGTCATGACGGGATGTCCTGAATGAACAAGAATGATGGAAAA ATTTTGActtgttacaattttttttacaattttttagattatttttcata tttacttAGActaccttttttgaaaatatagcaCAGTGGAAGCACAATTA TACCTGGCTTCGCTAAAACAATTTATCTTTTCAGTGTACTTCAAACGCAT GAATAAAATAAGTGTTTCGATCTAAAGTCGTCAATTTTTCCGACTGAATA AAATTTAAAGGgtagagttttttattttttcgctgtGCTATACATTTATA CATTTATTATTATCtctattttcagtttttccgTCTTTCTATAAACTGGT TTGCTCTCCAAACGAACAGGTGTCGATACCTTTTACGCCGCCCCTCCGCC CCTCCGCCCCTAAACAATATTCTATGTAAAAAATCTGTATTGGTATAAAA AGCAtagaaaatgacttttttcaaacttcttctTAGTACCTTagaccata gaggtataaagaNCATTTctgcggtatacggaaaaagtCGGCGCTAGAGC TTCGAAGAAAGACAGTCAAACTCTAGCGGCTGTAAACTATTTAtggcaaa aaaacatatatttGTGAATTTTCTTCGACTTTgagcttatttcttagata gtgattttgTCTCAGACTATAGCATAGCCTACCCTCCTACTATCTTCCTA TCTGCCTTGTTTTAAAACAGAAACTTGATTCATCATTTTCTCAACCTATA TCCTTGCTTCATTCTTAGGCAAAGACTACAAGCCCTTCGAAGGTTGTATC AGCAAAGTGGAAATTAATGACGAAGCTATCGACTTCacaagtgacgtcat caaaaatggcGCCGTCATGACGGGATGTCCTGAATGAACAAGAATGATGG AAAAATTTTGActtgttacaattttttttacaattttttagattattttt catatttacttagattaccttttttgaaaatatagcaCAGCGGAAGCACA ACTATACCTGGCTTCGCtaaaacaatttattttttcagtgTACTTCAAAC GCAGGAATAAAATAAGTGTTTCGATTTAAAGTCGTCAATTTTTCCGACTG AATAAAATTTAAAGGgcagagttttttattttttcgctgtGCTATACATT TATACATTTATTATTATCtctattttcagtttttccgTCTTTCTATAAAC TGGTATGCTCTCCAAACGAACAGGTGTCGATACCTTTTACGCCGCCCCTC CGCCCCTAAACAATATGCTATGTAAAAAATCTGTATTGGTATAAAAAGCA tagaaaatgacttttttcaaacttcttctTAGTACCTTagaccatagagg tataaagaaNACATGCTTAGACCTAATACCTTTGCAAATTTTTACTTACA AAGCATATCAGTATTTTCATTGGAACAACTTATTTTCAACAaggttttcg atttttttttcagccgaTGGAAAGGAGATCATTAGAATTTTGCCATGAAA GCTAATTTTTCGAGAAATAAGTTGTTTCCTTTTTACaccttttagcaaaa aaaaaacccgcaaaattatttttgttgatgAATTTATGCAGTTATTGTAA ACAGTTTTTTTAACatctttttgtttattctgaaaaattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040667XLOC_040667Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064837-exon-scaffold_425-1491911889:70581..70738TCONS_00064837-exon-scaffold_425-1491911889:70581..70738Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:70581..70738TCONS_00064837-exon-scaffold_425-1510915933:70581..70738Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:70581..70738TCONS_00064837-exon-scaffold_425-1575043694:70581..70738Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:70953..71085TCONS_00064837-exon-scaffold_425-1491911889:70953..71085Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:70953..71085TCONS_00064837-exon-scaffold_425-1510915933:70953..71085Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:70953..71085TCONS_00064837-exon-scaffold_425-1575043694:70953..71085Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:71157..71182TCONS_00064837-exon-scaffold_425-1491911889:71157..71182Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:71157..71182TCONS_00064837-exon-scaffold_425-1510915933:71157..71182Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:71157..71182TCONS_00064837-exon-scaffold_425-1575043694:71157..71182Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:71374..72177TCONS_00064837-exon-scaffold_425-1491911889:71374..72177Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:71374..72177TCONS_00064837-exon-scaffold_425-1510915933:71374..72177Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:71374..72177TCONS_00064837-exon-scaffold_425-1575043694:71374..72177Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:72562..72779TCONS_00064837-exon-scaffold_425-1491911889:72562..72779Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:72562..72779TCONS_00064837-exon-scaffold_425-1510915933:72562..72779Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:72562..72779TCONS_00064837-exon-scaffold_425-1575043694:72562..72779Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:73777..73907TCONS_00064837-exon-scaffold_425-1491911889:73777..73907Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:73777..73907TCONS_00064837-exon-scaffold_425-1510915933:73777..73907Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:73777..73907TCONS_00064837-exon-scaffold_425-1575043694:73777..73907Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:74924..75089TCONS_00064837-exon-scaffold_425-1491911889:74924..75089Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:74924..75089TCONS_00064837-exon-scaffold_425-1510915933:74924..75089Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:74924..75089TCONS_00064837-exon-scaffold_425-1575043694:74924..75089Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:75338..75715TCONS_00064837-exon-scaffold_425-1491911889:75338..75715Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:75338..75715TCONS_00064837-exon-scaffold_425-1510915933:75338..75715Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:75338..75715TCONS_00064837-exon-scaffold_425-1575043694:75338..75715Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1491911889:76949..77820TCONS_00064837-exon-scaffold_425-1491911889:76949..77820Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1510915933:76949..77820TCONS_00064837-exon-scaffold_425-1510915933:76949..77820Clytia hemisphaericaexon
TCONS_00064837-exon-scaffold_425-1575043694:76949..77820TCONS_00064837-exon-scaffold_425-1575043694:76949..77820Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:70581..77820 +
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00064837 vs. Swiss-Prot (Human)
Match: LAMA4 (Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4)

HSP 1 Score: 141.739 bits (356), Expect = 5.880e-34
Identity = 101/370 (27.30%), Postives = 175/370 (47.30%), Query Frame = 1
Query: 1042 VANAYGFGFEDESYIEFGVMKGKLDTKADYEFSFYTMEEEGLLMSGFMKSPYDYEAIYLAGGKAHYIFNAGAGSLTLSSKSTVNDGKWHTIKATRSKRAGTLYVDGDIAAVGESKPGASAVNNIN-KVYFGGLPSTSLVIP-KTPKTSQI----PLKGGMKDFKLFNEALVTPAASVGTSPAYNGLPYVNAVSFGANGGFAQKFKQLKIGQNFKISFDVRAANKAGSLFYVYG-GGDHLSVTVEENGSIKVTCNNGGGLFSVAYKPEPSVCNGDIYSVLVEKKMKTLKLTVNGAVXXXXXXXXXXXXXXXXPAYFGGLPDNLRSNWSKISDSKDYKPFEGCISKVEINDEAIDFTSDVIKNGAV-MTGCP 2127
            + +AY +G    S  EF  +KG    K+ +     T    G++     +   D+  ++LA G+  Y+FN G   L + S+   NDG WH +   R + +G L +DG +  + ES P   A   I   +Y GG      V P K  K  QI       G + + +L   ++ + + +   +P + G P      F   GG+    +   IG  F+I+F+VR  + +G+L + +   G++L+V + +NG + V  NNG   FS +  P+ S+C+G  + + V +    ++L V+  V       +    D   P + GG+P++L +   +++ S   KPF GCI    I+   + F+   + +GAV +  CP
Sbjct: 1466 IEHAYQYGGTANSRQEFEHLKGDFGAKSQFSIRLRTRSSHGMIFYVSDQEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDG-LRVLEESLPPTEATWKIKGPIYLGG------VAPGKAVKNVQINSIYSFSGCLSNLQLNGASITSASQTFSVTPCFEG-PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHM-KNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVVGPLNPKPIDHREPVFVGGVPESLLT--PRLAPS---KPFTGCIRHFVIDGHPVSFSKAALVSGAVSINSCP 1821          
The following BLAST results are available for this feature:
BLAST of TCONS_00064837 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LAMA45.880e-3427.30Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 P... [more]
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