TCONS_00064551 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064551
Unique NameTCONS_00064551
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length446

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064551 ID=TCONS_00064551|Name=TCONS_00064551|organism=Clytia hemisphaerica|type=transcript|length=446bp
CCCATGGACAAAACATCCTGATTTCTTCCCCATGGACAAACAAGGACCCT
TCTCCAACCCCTGGACAAATGACACGACCGACCCATGGACATTCTCTCCA
ACAGTCAGGTCTCCCCCATGGACAACACATATGTTCTCTCCCCCATGGAC
AACATGTCCTCTGCAACATGTCCTCGGGTCTAAGGTCTCCAGAGGTCTCC
CCATGGACAACCATGTCCTCATGTTCTCCCCATGGACATATCACCCAACA
CCCCTAGGACAAATTAGTCTAATTCAACCCATGGACAGCAAAAAATATAC
CCTTGGACAAAtggtatttaccccctggacaaatgATATCTACCCCTTGG
ACAATTGTTTTCTACCCCATGGACAAAGCGAGTCATGAACCCCCTGGaca
ttatatcctccaccccccatgtacggactttttctggaagagccca
Run BLAST on NCBI

transcript from alignment at scaffold_419:207..652-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064551 ID=TCONS_00064551|Name=TCONS_00064551|organism=Clytia hemisphaerica|type=transcript|length=446bp|location=Sequence derived from alignment at scaffold_419:207..652- (Clytia hemisphaerica)
CCCATGGACAAAACATCCTGATTTCTTCCCCATGGACAAACAAGGACCCT
TCTCCAACCCCTGGACAAATGACACGACCGACCCATGGACATTCTCTCCA
ACAGTCAGGTCTCCCCCATGGACAACACATATGTTCTCTCCCCCATGGAC
AACATGTCCTCTGCAACATGTCCTCGGGTCTAAGGTCTCCAGAGGTCTCC
CCATGGACAACCATGTCCTCATGTTCTCCCCATGGACATATCACCCAACA
CCCCTAGGACAAATTAGTCTAATTCAACCCATGGACAGCAAAAAATATAC
CCTTGGACAAATGGTATTTACCCCCTGGACAAATGATATCTACCCCTTGG
ACAATTGTTTTCTACCCCATGGACAAAGCGAGTCATGAACCCCCTGGACA
TTATATCCTCCACCCCCCATGTACGGACTTTTTCTGGAAGAGCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040486XLOC_040486Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064551-exon-scaffold_419-1575043694:207..652TCONS_00064551-exon-scaffold_419-1575043694:207..652Clytia hemisphaericaexon
TCONS_00064551-exon-scaffold_419-1510915933:207..652TCONS_00064551-exon-scaffold_419-1510915933:207..652Clytia hemisphaericaexon
TCONS_00064551-exon-scaffold_419-1491911889:207..652TCONS_00064551-exon-scaffold_419-1491911889:207..652Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:207..652 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.14282	0.445626	1.32813	1.18341	1.28539	1.56984	1.00213	1.25566	0.833355	0.371535	0.716268	1.19033	1.06086	1.33209	0	0.150165	0.536066	0.539626	0.00523529	0.436881	0.749518	0.317924	0.171637	0.0934676	4.0475	5.22656	0	1.05113	0.29449	0.0936526
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064551 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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