TCONS_00064363 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00064363
Unique Name	TCONS_00064363
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2496

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_412:20774..32156+

transcript sequence

>TCONS_00064363 ID=TCONS_00064363|Name=TCONS_00064363|organism=Clytia hemisphaerica|type=transcript|length=2496bp
ATTTTGGAAggcaaaaaaattctttgtcgCCCAACTATGATAGTGACATT
CAAAACCCCTgaattgaaattctattgttcagaCCAAAACGGTGGAAagg
aaaagtgcttggaaaatGCCCTGCTTGGATAACCAGAGAGTGCAAACGAT
TACCTCAACGCAAGGAACCTCTCTACAAGTGGGCTAAGCATGCAAATATG
GGATGCAGTGACCACGCACTGACCACGAAAAGAATGTCTgagtttttctg
aatttttatcGAATCGAATATTTTGGACGTACGTGATTTCCAATCAGCAT
TTatcattcatttttattttgatccTGCCAAACACTGAAATTCCAATATC
TCCTTCATCTATAATTAATAGATGAAGAAAAGGACGGAACTTAAAAATAT
CTGAAAGAATAATTAAGAAAAAATATCCCCATTTACTGATATTATATCTC
CATTGTGGATCGAGAAAGGATGTTTTTATATCCTTTTGTTTTATATTCAT
GTCAAAATCTCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCA
TATTctgctttcatttttcttttcactcAGGTGACAAACAGACGATAGAA
GGAAAATGGCTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTC
TTGTTAACACCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATC
CTCCCGAAAAGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATA
AGAGAGAGGGGGAAATACTTGACGATAACAGTAAAAGACCCATCTCGCGA
GAAGAAAGAGCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGC
CAATCTTTTCGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCG
GGTTTGAAAATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCT
GCTAAAAGATTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATT
TTATTCAAGTTATTTCAAGTTGGAGACGTACCACCACAGCAAGGTGATGG
TGATGTTGTTGGATTTCTACGATCATGGTTTTCGCTTCAGTGAATCCGTT
CGCAAGAAGATCGAAGTTGATTCCAAAAACCATTTGGATCATATCCATGA
TATCCAGAAAGCTTTCTTTCAACATAAAGTGAAATTGTGTTCCGCTTTCG
CGAGGAATCGCATCAAAGCGTGCGCTCTCTCCTTGGACGCCATGTTGCCG
GCTGAAGTGAAGGAACGTAACGAACATGGCTCGCGTCATTCTTTGTTCAC
GTGGATCAACCCTTTTGTGGCTGACGCACATTGTATCATCAATCAGCTGA
AGAGCGATGGTTTCGTTTACAAAGAATCTTTAGAAGAATTGAGTGGATCG
GAAGATAACGGACTTTATTTCTCTTATGAAGAAGATGGTGCAAACACTGA
CTTGTTGGAGTTTCCTGCATGGTGTAAAGATGAAGTGTACAACCATCAAT
TAGCATTGGATTCGTCTCTTGTTCCAATGAGTAAACCACGTTACCTGATG
ACAAAGGCGTGTCGGCGTGCACACGATGAAGTGTGTCGAGTGCAACAGAA
ATCGCATCATCACGCTGTTCTCCCGGCAACCGATGGCAAGGAGAATCATG
ATATGGTGAACGGTGGTTGTGATGTCGTCCTCACTCATCCTGAAACTGGA
TCGTTGGCGGCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCTT
TATCTTTGGTTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttga
aaaatattggaatatcaAATTATGTTTTGTTGAGTGAAGATTTCAAGAAC
ATCGTGGGGATCGATGACCGGCTTTCATCCGTTAAACTGATCGTTTGTAA
CCCACCCTGTTCCAATAGCGGTGTAGTGAACATGGTGGACTTTATCATAC
AGGAAGGAGCAGACACAGCCAGCAGTCTGTCTAAAGAAGCCACTCCAGTC
AAGATCAGAGGTCTAGCGGAAGAACAAGCCTCTACCATCAGGATTACTTT
CTCTTTCCCAAATGTCCAATCCATTGTTTACTGTTCCTTTTCAACTTTCC
CTGAAGAAAATGAGAAATTGGTGCAACGCGTTTTGCAGAGTCAGCAAAAT
TCCAAGAATCGTTTCGAGATGTGTGTCGTCTTGGAAGATATGAGAGACAT
TTTCACCTCTAGCCAAGATGGGGATTTCTTGAGAGTGGAACCTTCGTACA
AAATGGATGGTTTCTTTGTCACTTTGTTGAAACGAAAGATCAAGGAGGAT
TCAGTGAGTGAAGTGATGGAGCGAGCGGCCAAGAAAGGTTTATTAAAGAA
ATCGAGCGGTAAGAAAGAGAAGAGGAAGGGCGTTCCCAAAGATCAACCGC
CCCACGTCGCCAATCGGTTGTCGGTTGTTGATAAGAAGAAGGCGGGGAGA
AGCTCACCTAAACCACAAAAGAAACTGGAAAGACGAGACACTGANN

Run BLAST on NCBI

transcript from alignment at scaffold_412:20774..32156+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00064363 ID=TCONS_00064363|Name=TCONS_00064363|organism=Clytia hemisphaerica|type=transcript|length=11383bp|location=Sequence derived from alignment at scaffold_412:20774..32156+ (Clytia hemisphaerica)
ATTTTGGAAggcaaaaaaattctttgtcgCCCAACTATGATAGTGACATT
CAAAACCCCTgaattgaaattctattgttcagaCCAAAACGGTGGAAagg
aaaagtgcttggaaaatGCCCTGCTTGGATAACCAGAGAGTGCAAACGAT
TACCTCAACGCAAGGAACCTCTCTACAAGTGGGCTAAGCATGCAAATATG
GGATGCAGTGACCACGCACTGACCACGAAAAGAATGTCTgagtttttctg
aatttttatcGAATCGAATATTTTGGACGTACGTGATTTCCAATCAGCAT
TTatcattcatttttattttgatccTGCCAAACACTGAAATTCCAATATC
TCCTTCATCTATAATTAATAGATGAAGAAAAGGACGGAACTTAAAAATAT
CTGAAAGAATAATTAAGAAAAAATATCCCCATTTACTGATATTATATCTC
CATTGTGGATCGAGAAAGGATGTTTTTATATCCTTTTGTTTTATATTCAT
GTCAAAATCTCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCA
TATTctgctttcatttttcttttcactcAGGTGACAAACAGACGATAGAA
GGAAAATGGCTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTC
TTGTTAACACCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATC
CTCCCGAAAAGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATA
AGAGAGAGGGGGAAATACTTGACGATAACAGTAAAAGACCCATCTCGCGA
GAAGAAAGAGCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGC
CAATCTTTTCGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCG
GGTTTGAAAATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCT
GCTAAAAGATGTAAGTGACTTTCTCCTCTTTTGAGTTTTATGAGTTTAGT
TAACAGTTGATGCCCGCTTTCCAAGGTAAATCAAATTTATACCAAATACT
GGAACTTATCAAATAATGAATAGTCCGCCTGTTCCGGTAAAAACGAGgta
aaaatctaatttaaaaatcGAGAATATAAATTTCAGTGAGACTCTTGAAC
GCTAaccaaaataataatattgaaggCCTCGATGAAGCCTAACTTGTTTG
CAAAATATCTCCGAATTTTATCTgttctgaaaatcaaattttaatcaaat
ttctcgatttagaaaatcaaaagatttgaaaaatctagTTTGCGAGCTCC
GTTCTTTAGGTCTTCATATTTTAACCCGCTGAAATGGAATAAGAGAGCGA
AAAACCTTTGATTTTAAATCTAAAACGTGAGGTTATCATATTCCGGTATA
GAATGTCGAAATGTATCGGTTGTGAGGTTTTCTCTCCAATAAATTTGAAA
GTTGGCTTCCATTCATTGAGAACGGAAGTTTGTCGATTGTAGGACGTGGA
ATTAGTAAGACTTTCAACGTTaatattcattctttttttcttgcgtTTAC
CTTATAGTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTA
TTCAAGTTATTTCAAGGTACGTATTTTGATACTGTTATCACTGCAGGATT
TCACTTTATTTACCTTTAGGGTGTTTTCAAGCTCGTGTCctatttttgct
tggttagcgTCTGTGAAAATGAAAGCTCACTTAAAATATGTGAACACCCT
TTTtctgaattcttttcaaaaaaaattttaagccaaagtggaagaaaagt
tattggatttcattttggtaaaatcgcgatcttaaaatcttgcTTTTGGT
CCAGAGTTAtaacaatttaaattttaaaacagaGTTTGCTTTATGAATTA
TGTTACTCattaattgtctctttcggaaagaACAAAGAGAAAAGACAAGG
TCCAGCTTACGTTTATTCTCACATCTATGGAATAGTAACATTTtgacaca
ttttgctgattaaTCAATTAAACAGCAATTGTCTcgctaaaaatttcaaa
tcgatgtagagaaaattgaaattttactataccatactacttttaacgaa
gttaaagtgtATGAGTGACTACTAGCTATCGACTccattcttttttataa
gattccCGAAAGGTCAAACTTAAAAAGCGCATTTGAATTAaccttttgga
cctaccccggaggtcctttaatcgttcgttcgttcgtctgttaccagctt
ttctcgcgATTTTTTGCATAGAGATGCAAATCGACAGTACCCAAAaggtg
acgaagcccgatttttgtaaaaaacttttttgggcaaatttagggccgta
aaaatcagattttcttaATTGGGGAAATTcacttttatcatttttaggga
NTCTGAATTTTTATCGAATCGAATATTTTGGACGTACGTGATTTCCAATC
AGCATTTatcattcatttttattttgatccTGCCAAACACTGAAATTCCA
ATATCTCCTTCATCTATAATTAATAGATGAAGAAAAGGACGGAACTTAAA
AATATCTGAAAGAATAATTAAGAAAAAATATCCCCATTTACTGATATTAT
ATCTCCATTGTGGATCGAGAAAGGATGTTTTTATATCCTTTTGTTTTATA
TTCATGTCAAAATCTCACAGTCAAACGTGAAGGCGGATAAGCTCCACGAT
TTCCATATTctgctttcatttttcttttcaccCAGGTGACAAACAGACGA
TAGAAGGAAAATGGCTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCA
AACTCTTGTTAACACCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAA
GGATCCTCCCGAAAAGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCG
AAATAAGAGAGAGGGGGAAATACTGGACGATAACAGTAAAAGACCCATCT
CGCGAGAAGAAAGAGCACAGATCAAGTTTGGACATACCATTTACAATAAA
GCTGCCAATCTTTTCGAATTGCTGAAAGACAACACCGTCGTCCAACCGAA
AATCGAGTTTGAAAATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCAT
TTGCTGCTAAAAGATGTAAGTGACTTTCTCCTCTTTTGAGTTTTATGAGT
TTAGTTAACAGTTGATGCCCGCTTTCCAAGGTAAATCAAATTTATACCAA
ATACTGGAACTTATCAAATAATGAATAGTCCGCCTGTTCCGGTAAAAACG
AGgtaaaaatctaatttaaaaatcGAGAATATAAATTTCAGTGAGACTCT
TGAACGCTAaccaaaataataatattgaaggCCTCGATGAAGCCTAACTT
GTTTGCAAAATATCTCCGAATTTTATCTgttctgaaaatcaaattttaat
caaatttctcgatttagaaaatcaaaagatttgaaaaatctagTTTGCGA
GCTCCGTTCTTTAGGTCTTCATATTTTAACCCGCTGAAATGGAATAAGAG
AGCGAAAAACCTTTGATTTTAAATCTAAAACGTGAGGTTATCATATTCCG
GTATAGAATGTCGAAATGTATCGGTTGTGAGGTTTTCTCTCCAATAAATT
TGAAAGTTGGCTTCCATTCATTGAGAACGGAAGTTTGTCGATTGTAGGAC
GTGGAATTAGTAAGACTTTCAACGTTaatattcattctttttttcttgcg
tTTACCTTATAGTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACA
TTTTATTCAAGTTATTTCAAGGTACGTATTTTGATACTGTTATCACTGCA
GGATTTCACTTTATTTACCTTTAGGGTGTTTTCAAGCTCGTGTCctattt
ttgcttggttagcgTCTGTGAAAATGAAAGCTCACTTAAAATATGTGAAC
ACCCTTTTtctgaattcttttcaaaaaaaattttaagccaaagtggaaga
aaagttattggatttcattttggtaaaatcgcgatcttaaaatcttgcTT
TTGGTCCAGAGTTAtaacaatttaaattttaaaacagaGTTTGCTTTATG
AATTATGTTACTCattaattgtctctttcggaaagaACAAAGAGAAAAGA
CAAGGTCCAGCTTACGTTTATTCTCACATCTATGGAATAGTAACATTTtg
acacattttgctgattaaTCAATTAAACAGCAATTGTCTcgctaaaaatt
tcaaatcgatgtagagaaaaatgaaattttactataccatactactttta
acgaagttaaagtgtATGAGTGACTACTAGCTATCGACTccattcttttt
tataagattccCGAAAGGTCAAACTTAAAAAGCGCATTTGAATTAacctt
ttggacctaccccggaggtcctttaatcgttcgttcgttcgttcgtctgt
taccagcttttctcgcgATTTTTTGCATAGAGATGCAAATCGACAGTACC
CAAAaggtgacgaagcccgatttttgtaaaaaacttttttgggcaaattt
agggccgtaaaaatcagattttcttaattggggaaattcccttttatcat
ttttatggaAAATGAGCATTCCTCGCGACTGCCTTGGTATTTTAcctgat
tttttgtaaaattgtaaattttaaaatctgatcgagcccgattttcgaaa
caataattatttgggcaaatttgtccaaaaagtGTCTAAAAATAGGATCA
TTGCATGAATGATAATGggcaaagttctttaaaaagtggCTGAATCAGTT
TTTTCGGATAActttttttggccgtaaaaatttATTaatcttatttgggg
aaatttccctttgtcatttttagggaaatgagcatttctcgcaACGTCGC
AACTGCCTTGGTATTTTGTCTGATTTTTTggacaatgatgtaaaatggta
acgtttaagggctctgaccatagtgaatttttaatatttgccagtggcaa
atttttttcattgcaattcttaaattttcagatttcaagGATAATTGTAC
GTgacgtacaaaatataaatttctacttgatgtagcccacaagacttgac
gaagaagaaaatttttgcgaagaagagtatttcaactttgaagaacttat
tttcggcgaagaaaaaacaatttttcatcccaatttttcatagaaaaaca
gccataacttttgatacattatttagaaaatttttccgaaaaatttaaaa
cagttcaattctttgcggacagtatgaaaaaacttcgaaacaaaaaagtt
aattacccattaaaactttttataaaagaaggtaatgcaacatattacta
acgtctttttaaagttcatagcgtcattttcgcaattaaattcttaatta
ctcttaggggatttgattaaaaagcaatttaaaaaggcaattctttgtta
aagtgttaaagaagctaaaacataacttttatgttcaaatactaaagtCA
TAttttcgactatggtcagagcccttaaaatctgatggagcccgattttc
aaaagaaaaattttaggcaaatttgggtcGAATTCAGATTTGTAGAAGTT
GCTTCATTCAATTTTATCTTTAATGAGAAAGAGTTATGAAAGAAAGGATC
GTTTTTGTTTACTCCTTGGGGCTACTTAGCTCTAAAATATCGGAAAGCCG
ACGTGAAACAAGTTGCATCATGTTTTCAAGTTTACGCATCTCTATGCTAT
GCTGTTATCTTTTCCATTTCGTTCGAACATTTTCATTTAACACGTTTCCG
ACTACCtatatcaggtaggtccattcagcacgttgcttgttttcaatatt
tttacaaagattttatcAAGATTTAACGAGTTAAAGTCAAtgtaaagaaa
aatctttttagttcaatctattgaatttttaaaatggtGTCGTTAAAAAT
TTTGAGTAGAAACTCTTCCGCAATATGACATATCAAAGGCCTTCAGAACA
TAGTACCGAAATTATTTTTCCAGAATTTAAAAGCTATGGGCGACTTCACC
TTCTTTGAAGTAGGCAatgttgaaattttaaattttaattactGGCTTTC
AGAAATACATATTTTGATGtacaaaaatttgttgttctaaagatatggcC
AAGGAAAGAGAATTTGTCATAAAGGGTGTCCACATACCTTAACACATCCC
gtaagcatagtataagaacgccgcggctggaatgataacatctgaacttC
TGTTGATTGAAGTTAGATCGCCGCCAAAATTCGATCCTTCAAGTCGTCCC
GACGTACTAgaagtcgtcccgtcgcactAGAAGTCCGCAGGTCGCATTAG
AAGTCTGCAAGTCGGAATCTTTTGGAAGTCGAAACATTCCAAAGTTTAAG
TCGAGTCGTTGCTTCAGAAGTTGACTCGTCGCAAATTTCGGCAGTCGACT
CATCCCAAAAAGTTGGACTCTAGGCTATTCCGAATAAAAAACTTGTTTTg
tatatcaaaaatcaaaatattgtggAGATAATGTAATGTTCGTGTGGTGT
GCAGTTTTTTTTGCACGTGCAGAGCTCACCCAGGGAAAACTTCAATGTTC
AAAATAGAAGCTGGTGGAAACACACGTGTGGAAATTTACTTATTGATTAG
AGccatgtcaaaattttgaaaacaattttgaatttNgaaggaaaataaga
gaaaaatttcaaaaactatctaccaataataaactgagcatctcgatgtt
cttataaagcttgGAGACAGAGATAGAGCAGCAATTAACTGAGAAGACAA
tgtggtacatattccagccgcgacATTCTNTAAACGTACATGATTGGAAC
ATGTACCAAGTTCCGACGAGTTAACTTCTGATAGGAACCACTAAAAACTT
GGTATGGCTTGACTTAAAAGAAATACGACCTGTGAACTTATAGTGCGACG
GGAGGACTTGAAACTTGGGATGATTCGACTACCGAAAACTGCGACGGGAC
GACTTCTagtacgacgggacgacttgaaggattgaattttggcggcgatc
taacttcatactgttgttctatctctgtcgtatttgatgacattttttta
tcaagagatcagtaatgtagcatctttaatggtaaattttattggtttgt
cgttaatacttacttctcagtgtgtTTTAGATATTAATTatacccttgat
aatacacttgcattgtAAAATCAttatcaacaataagaaatttaaaataa
acaaagtgcctcgaatgccttcgcaatatttcaNtacatattccagccgc
tgCATTCCTATACTATGCCGTGAGTATATTTTTCCAGATATACTGTTGGC
AAGAGAGCCAGACCTATACACCCCTTCTCAAAACGTTATGAAGTGTAGCA
ATTACTATTtacgttgaaaaaaaaaagtttattcttCATTTCTGAAGCAT
TCTTTGTCATTTTGAAGTGATATAGGGAACTCTCAAAAGTCATTACGCGT
AAAATCATTTCCATTTCGAGATTTCCTAGCCAATCAAAATACGAGCACAG
AAAGCTGTACTAGGTCTCTCCTGGCAACAAATTCCGTAGCTGAAGCCATC
GCCatcatatataaaaaaacagAAGGTTTGGATTCAGCAAACGGGTTTTT
GTCGCCAGTTTTCTGAACTAATTTTTCAATTGGTTCTATAGTTGGAGACG
TACCACCACAGCAAGGTGATGGTGATGTTGTTGGATTTCTACGATCATGG
TTTTCGCTTCAGTGAATCCGTTCGCAAGAAGATCGAAGTTGATTCCAAAA
ACCATTTGGATCATATCCATGATATCCAGAAAGCTTTCTTTCAACATAAA
GTGAAATTGTGTTCCGCTTTCGCGAGGAATCGCATCAAAGCGTGCGCTCT
CTCCTTGGACGCCATGTTGCCGGCTGAAGTGAAGGAACGTAACGAACATG
GCTCGCGTCATTCTTTGTTCACGTGGATCAACCCTTTTGTGGCTGACGCA
CATTGTATCATCAATCAGCTGAAGAGCGATGGTTTCGTTTACAAAGAATC
TTTAGAAGAATTGAGTGGATCGGAAGATAACGGACTTTATTTCTCTTATG
AAGAAGATGGTGCAAACACTGACTTGTTGGAGTTTCCTGCATGGTGTAAA
GATGAAGTGTACAACCATCAATTAGCATTGGATTCGTCTCTTGTTCCAAT
GGTAAGCACCTTCTTCCacaccatttttcatttttgatccAAAATAACAT
GTTGTAAGAAATTCCACTGAACCTCTCTACTTTTTCGCATGATTGCTCTC
CTCCTCTCGTGTAAAAGAAGTAGTTTTGAATTATGCACATGTTTACAATA
CTGAGGGACCATTCCATTGGACCCGTGACAACAATTTGTACTGTGGAATT
TTTTATCGTTTAAAGAAAGTTTATTATATTTGGAGACCTTTGGAGTTGAG
TATGCGAATAAGAGATGTCAAAATGTATCATTATCATGGCCAGATCACTG
ACGTTACAGGCAAAGCTGCAAGGGAAAGTGCGTAAAAATCATCAATTTCC
AAAAGTCGAATTTAACAAAAAGGACTAATACTTCAGTTAGATCATTAAAT
TCTGATATGACCAAAATTAGTATACTACAACTCTCTCGAACATACAATGA
CATAAGCACATTTTAAGCTCGAAATTCTGTCTGGTCCAGTTCAGTTCTGT
CTACCAATAGAAAACTCACCATATGTGTTGCTCGTAACAAATAAATGCTT
CGATAATCTTTCGATATCTTCTCCAGAGTAAACCACGTTACCTGATGACA
AAGGCGTGTCGGCGTGCACACGATGAAGTGTGTCGAGTGCAACAGAAATC
GCATCATCACGCTGTTCTCCCGGCAACCGATGGCAAGGAGAATCATGATA
TGGTGAACGGTGGTTGTGATGTCGTCCTCACTCATCCTGAAACTGGTATC
TTTCTTTCTCTAAaaggctacacgttttttataagaacataaggcttcga
tggccaaaatttgaagaacaagttaaggtctctgaccatagtgaattttt
aatatttgtcacttacaaaatataaagttctacttgatgtagcacacaaa
actgtggcatgttatacattttctgttaggccaattatccgtgagtctga
aaatttaagaatcgcaatgaaaaaatttgataaagaagaaaatgaagact
ttcgcgaagaagagtatttcaactttgaaaagcttagtttcggcgaagaa
aaaacattttgaaaaattatttgcaGTAGATGGTttatcttttatcgaac
taaaattattttttcggaatttttttctaaaagcttatttgcttcaaaat
cttgaaaatagtgctttttgaccaattttccatcccaatttttcatagaa
aaacagccataacttttgatgcgttaatttagaaaatttttccgaaaaat
ctaaaacagttcaattctttgcggggcagtttgaaaaaacttcgaaacaa
aaaggttaattacccattaaaacttaaaactttttataaaagaaagtgaT
GCAACATATAATTAACGTctctttaaagttcataacgtcatttttgcaat
taaattcttaattactcttaagggatttgattaaaaagcaatttataaaa
gcaatatttgtcaaaagtgttaaaaacctaaaacataacttttgtGTTCA
AAtacttaaatcaatttttcgagTATGGTCCGAGCCCTTAaggacatttt
aaggctttatggactctaaaacacccgacttttttggaaaatggtcaaaa
aagctcaaaaagtgTCTAAAAATCTACTTGATGCCATCATCGAATTCGTT
AAACATCAAAAGAGCATCCAAAGAAAATAATCATCTTCTATATTTTCATT
CTTCAGGATCGTTGGCGGCATACTTATGTTCCTTCCTTGGCACCAACAAA
CGTCTCTTTATCTTTGGTTGTCATGGTGACAAAGCGGTAGAGGtcgagaa
aaatttgaaaaatattggaatatcaAGTATCCTTTCACCTAGTGTTTTCC
AATACTTTTTATTgcctttattttttgaaaattaactcGTAGTTATTCAA
GGTCTTATCCTTTGTTCGCTTTCAGATAGATATCACGGACCTTAACAGTT
CAAAATAGATTATGTTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGGA
TCGATGACCGGCTTTCATCCGTTAAACTGATCGTTTGTAACCCACCCTGT
TCCAATAGCGGTGTAGTGAACATGGTGGACTTTATCATACAGGAAGGAGC
AGACACAGCCAGCAGTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGAG
GTCTAGCGGAAGAACAAGCCTCTACCATCAGGATTACTTTCTCTTTCCCA
AATGTCCAATCCATTGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAAA
TGAGAAATTGGTGCAACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAATC
GTTTCGAGATGTGTGTCGTCTTGGAAGATATGAGAGACATTTTCACCTCT
AGCCAAGGTAAATGCTTTGTAATTGACTTAAATAATAAGATTTAAAAGCT
ATTTGAAGACAAAGACAAAGTTGAACTCATCATTAATTTTAAAGCTCGAG
GGGTTCAAACTggaaactcctggatgggaaaggaagccacttatttccca
tccaaaacgcgtgacccgtatggttttcacacaaacgccagattggaAGT
AAAAGCTATCGCAAGATTTCGAAACACGCcgcttaaaaacaaagaaagag
ctAGATCTAATCTGTCATTCTCAATGCggcgcaaatcttaaggcttcact
tttacTTGCTTGATAAAGGTTACAGATTCATCTCTAaccccttcggggct
ttaaactcaatggaacTCATCCTCCCTTTTTACAGGAAGTGTATCAAAtg
tgctttctttctttttgctaGATGGGGATTTCTTGAGAGTGGAACCTTCG
TACAAAATGGATGGTTTCTTTGTCACTTTGTTGAAACGAAAGGTTTGCTT
TTCGATATTATTCTTTCTTAGTTATTTGAACTATTAAACCTTCTGATCAA
AGAAATAACCAAGTTGATTTTTGACAGTACAGTGCTTATTGTCATTGTGA
TATTTGGATTTCTTTAATGTTATATGCGAATTTCTTTGAGAGTCCTGTCA
TTTACACACTTCACTCGTTCTGCAGATCAAGGAGGATTCAGTGAGTGAAG
TGATGGAGCGAGCGGCCAAGAAAGGTTTATTAAAGAAATCGAGCGGTAAG
AAAGAGAAGAGGAAGGGCGTTCCCAAAGATCAACCGCCCCACGTCGCCAA
TCGGTTGTCGGTTGTTGATAAGAAGAAGGCGGGGAGAAGCTCACCTAAAC
CACAAAAGAAACTGGAAAGACGAGACACTGANN

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_040357	XLOC_040357	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_412	supercontig	scaffold_412:20774..32156 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.35061e-09	0.00510559	0.656452	2.95578e-09	0.817779	0.628046	0.00356759	9.55143e-10	0	9.94582e-07	0	0.278528	0.374872	0.409886	0	0.24005	0.0646287	0	0	0	0.591486	0.557225	0.30569	0.424038	1.23728	0	1.34084	0	7.62157e-08	0.00149528

Blast

[Close]

BLAST of TCONS_00064363 vs. Swiss-Prot (Human)
Match: NSUN7 (Putative methyltransferase NSUN7 OS=Homo sapiens GN=NSUN7 PE=2 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 1.149e-40
Identity = 149/543 (27.44%), Postives = 253/543 (46.59%), Query Frame = 3

Query:  747 NKREGEILDDNSKRPISREERA-----QIKFGHTIYNKAANLFELLKDNTVVQP---KIG---------FENEFEKRRAYSLAFAAKRFEGILKDVLLDSTFYSSYFKLETYHHSKVMVMLLDFYDHGFRFSESVRKKIEVDSKNHLDHIHDIQKAFFQHKVKLCSAFARNRIKACALSLDAMLPAEVKERNEHGSRHSLFTWINPFVADAHCIINQLKSDGFVYKESLEELSGSEDNGLYFSYEEDGANTDLLEFPAWCKDEVYNHQLALDSSLVPMSKPRYLMTKACRRAHDEVCRVQQKSHHHAVLPATDGKENHDMVNGGCDVVLTHPETGSLAAYLCSFLGTNKRLFIFGCHGDKAVEVEKNLKN----IGISNYVLLSEDFKNIVGIDDRLSSVKLIVCNPPCSNSGVVNMVDFIIQEGADT--ASSLSKEATPV-KIRGLAEEQASTIRITFSFPNVQSIVYCSFSTFPEENEKLVQRVLQSQQ--NSKNRFEM---CVVLEDMRDIFTSSQDGDFLRVEPSYKMDGFFVTLLKRK 2288
            N+ + EI+   +  P+S  + +     +  +  ++Y  AAN+F+ ++     Q    K G          E++  +R +Y LAF+A +++ IL+ +L+DS  + S   +  +  S ++VML DF D  F+       ++  D++  +  + +++      K+KL +A AR RIK  ALS+  +LP  V+++    S   L+ WIN        + N LK  G+   +S+  +    D+ +   +  D    D+L FP+  K+++ N  L  D  L+   K R L                     H+V    +  ++  MVN G    ++H           S L  N    +F C G ++   + +LK     IG  N  +L E F NI   D RL  VK+I+  P CS  GV N V+FI+ E  DT      S+    V K+  LA++Q   +     F   Q++VYC+ S FPEENE +V++ L+ Q   N    + +    + L  +++I  S+    F R+EPS   +G F+++L R+
Sbjct:   12 NEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIEKSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPST-TIPDHLSSLIIVMLYDFQDRKFQ------TRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHI----DDKV---FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAV-------------------HSVKALLNMDDDVLMVNTGSWYTVSH----------MSILTNNNTSKVFVC-GVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESKDHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSPPVLPLCSLKEIQLSTD--KFFRMEPSEITNGCFLSILTRE 508

The following BLAST results are available for this feature:

BLAST of TCONS_00064363 vs. Swiss-Prot (Human)

BLAST of TCONS_00064363 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NSUN7	1.149e-40	27.44	Putative methyltransferase NSUN7 OS=Homo sapiens G...	[more]

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TCONS_00064363 (transcript) - C. hemisphaerica