TCONS_00064163 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064163
Unique NameTCONS_00064163
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2387

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064163 ID=TCONS_00064163|Name=TCONS_00064163|organism=Clytia hemisphaerica|type=transcript|length=2387bp
GAAACTTTGATGAGGTGAAGATGTGTAAGACAGACAACAAGAAAGATGAA
ACTGCTCTGCTCCGTGAGGATACAGATGACGGTGAAGTAGTACTGAGTAA
CCCAGCTCTCTCGTCCAATGGGGTCGTCAATAAAGTGTGCTTGACCTGGG
ATAATTTATGCGTAGATGCAGAACTTccgccgccatcttgttttacaAAA
TTAAAAGCTAGAAGCGATCCGTCCATACTTGAAACTTATAAGAAAACAAA
ACCTATCCTGAAAAATGtTACTGGCGTTGCAGAGCCGGGTAGTTTATTGG
CCATCATGGGAGCCAGTGGTGCGGGCAAAACAACTTTACTCAATGTTTTA
TCCaatcaaaatgtaaacaacATGCGAGTCGGTGGAAAGATCCAAGTCAA
TGGCAAAAGCATGAAATCGAAAATCAAGAACATCTCAGCGTACTGTCAAC
AAGAAGATCTGTTTATAGGAACGCTAACTGTGAAAGAGCATCTCACTTTT
CAGGCACTCTTACGTATGGATGGAACGAACGAGGAAAAAAAAGCACGTGT
TCACGATGTCATGTCACAGcTTGGTTTGTTGAAATGCAAAGACACAATTA
TTGGTGTTCCAGGAAGAATCCGTGGTATTTCTGGTGGTGAAAATAAACGC
TTGTCTTTCGCTTCTGAGATCATTACCAATCCGAACTTGTTGTTCGTCGA
CGAGCCCACATCAGGACTTGATTCGTTCATGGCTGAAAGTGTAATCACAG
CCTTACAAAATATTGCTCGCAAAGAAGGCAAAACAGTCTTGGCCACCATA
CATCAACCTTCTTCAGAAACATTTGCTCTTTTCGACAGACTCCTGTTGAT
GTCAGAGGGTCGAACAGCTTTCCTGGGAAGCACAACAGATGCCATCAGCT
TCTTTAGTGGAGTTGGCTATCCAATCCCACCGAATTACAATCCGGCGGAT
CATTACATTCACACATTAGCCATCATCCCGTCACGTGAAGCTGAATGCAA
AGAAAAAGCAAAGGCCATATGCGACGCTTACGATACTCAATATGGAATTG
GAAAACAACAAATGGAAAATGGAGATAGTAGCAAAGTAGAGACCCATCAT
GAAATCCCTCAAGCACCAAAATTCAAAGTGGGAATCGTGGGACAATTCCG
TGCCGTTCTATGGCGCTCATGGATGGCTGCATTAAGAGAGCCGTTTGTTA
CCAAATTACGATTGATTCAATCTGTCGTGATCGCATTAATTGCTGGTTTA
GTTTATTTGAATCAAGGAAACGAAGGCCAAGATTCTGTTCGTAATTTAAA
TGGAGCCTTATTTTTCGTCACCACTACAATGACTTTCAACTCTATAACTG
GTTCACTATATGTATTTCCAGCAGAGTTACCAGTGTTTCTGAAAGAGCAT
AAGCAAGGGATGTATCGGACAATGGTGTATTTCATATGTAAAACGCTAGC
TGAGCTTCCTTGGTATACTCTTGGTGGATTCATTTTCTCTGTGATTGTCT
ATTGGATGGCTGGATTACGAGGAGAAGCagccaattttttcattttctgt
gGAATCGTTCAACTGATCACACAATGTGCCCTATCTTTCGGATATTTGGT
ATCAGCCATTTCACCGAGCGTGCAAATTGCGACGTCAGCAGGCCCTCCCT
TGATGATGCCCTTCCTCTTGTTTGGCGGTTTCTTTATCAAGGACGAgtCG
ATTCCCGATTATTTCATCCCACTGAAGTACATCTCATGGTTCAAATATTC
TTTCGAAGCCCTACAAATCAACCAATGGGATGGCTTGACCATTCCTGGAT
GTGTGAATTCAACAATTGCTTGTTTCCCAGACGGAGAAGCTGTTCTCAAA
TCTAGTGGTTACAGTGCTgaCAACATGGGGCTGAATATTGGAGTTTTGTT
CGCCATTGTGATCGGTTTTCGTTTTATCGCCCTCTTGTTCGTTTTATTAC
GTGCAAGACGAGCTCGATGATCAAACACAATCgcatgaaaaacattttaa
atgtATTTAGTAGTATTTTAGCCTGTATATGTAtaggatttttgattttt
atgtttcgtttatattcttttgttcttttatgCATATTATCAGTCCCGGT
ACTAATCCGAGAGAAAAATTGAGAGTAAACTTACAGGTTTTCAGAATCAG
ATtgaaattttagtcatttttacagttatgttaaattttgttttcaccTT
TACTAGaaacTTCTTTTAATCCTTTTAAGAATTTTTGCTGCGCGCCACTT
TATCTTGGTTTTATcggagaaaaagatttttttaattcccgcatttttga
caaaattgtcaaaattattatttttgtatatattgttttttttttcacat
caaCCATAGcatttaaaaagaagaaaaaatgacattt
Run BLAST on NCBI

transcript from alignment at scaffold_41:211786..224134+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064163 ID=TCONS_00064163|Name=TCONS_00064163|organism=Clytia hemisphaerica|type=transcript|length=12349bp|location=Sequence derived from alignment at scaffold_41:211786..224134+ (Clytia hemisphaerica)
GAAACTTTGATGAGGTGAAGATGTGTAAGACAGACAACAAGAAAGATGAA
ACTGCTCTGGTAAAGATGGTTTATAATTGTCATCTATTAATGACATGGGA
CCTTTCCATATGGTCGGATTGACTTTCCATGTTCTtaaggctggtctcca
ctttcgcgcgaaaagagcgaaaactttttaacgtttttgtaaggtcattg
gtcggttgaaaaatgaagcaattccatcaattgacgtaacggttgaaaaa
attgaacttctttcaacttttttttgttcgtacGATACTCTTTTACGgcg
taatcttttctttaggcaaaaaaggttgagaaaaaactgtcgcccatttt
gCGCGAAAGTGGATACCGGCCCTTAGGCGCAGCGAGAATTAAGCTGCGTC
ATTGGACAGTTATATCATAAAACAAGGCTTTCTTTCGACAAAAGTTGTAA
TATCAATATATGTAATACATCATACTGTGAAATAAACTTTGTGGGAAGCG
ACTTCCGCTATAATACCTCGGaaatgacttcaaaatttcttgtctttgag
aatagcaatgcaacgacttcagatcttttgacgtcaatcctTCTtggtca
ctgacctttatataaccctggacaaagcttctcaatcccagccaagcaaa
atctttgatcggagttttttgagttaccctaatgtcggcactactcaata
gcggtgtaaatgcatcgagagagctaggtctactttccctcaaattcttt
tgatgatgtagcggcgttagacgttaatttttagcattgcaatggcttct
ccttgggtaccaattctaaaaaaactccaatcaaagatggcagatattgc
ttgatccagggttatataaaggtcagtgttctTGGTAAACTCGAACCAGT
CTCCTANgtttttgtaaggtcattggtcggttgaaaaatgaagcaattcc
atcaatgacgtaacggttgaaaaaattgaacttctttcaacttttttttg
ttcgtacGATACTCTTTTACGgcgtaatcttttctttaggcaaaaaaggt
tgagaaaaaactgtcgcccattttgCGCGAAAGTGGATACCGGCCCTTAG
GCGCAGCGAGANTTGACAGGTCTATTAGCAAACgaatcttttatttattt
tcttcctattttttagCTCCGTGAGGATACAGATGACGGTGAAGTAGTAC
TGAGTAACCCAGCTCTCTCGTCCAATGGGGTCGTCAATAAAGTGTGCTTG
ACCTGGGATAATTTATGCGTAGATGCAGAACTTccgccgccatcttgttt
tacaAAATTAAAAGCTAGAAGCGATCCGTCCATACTTGAAACTTATAAGA
AAACAAAACCTATCCTGAAAAATGGTGAGTGGAGTATTAAAAGTCAATAG
TTCCCTTTGTCCTTCTTTGAAATCAAGACTTCTTTGAAGACTCCTCCATC
AAAGCCTAAAAACACTATTctaaatgataattttttttctcgaaatttct
TACTTGAAGTAACTCTAGGTACCCGAAAGGAACTACTAGAGACTCACTAT
AACACGAATACAGCACgaattttttaacaatattCGGACCTCTTCATTTG
ACCTCTTCATTTAGCCTAGCCTTATAAATAAGTCTCCATTAGTTGGACGT
GTTTCATTCCACACATGTGCTCCGAGCTATAGAGAGTCTACTGGCGATAA
TCTTTTACTTTGGTCTGCAGTGAGACGTTTCTCCCACTCGTGAGCCACTT
GGTGGTTTGGTGGTGGTGTACACCTTTAGCCAAGTCTCCAAAATACTTCC
TATCAGACCTAAGCGTTCGAGTCAAAAAACCTTTCTCGACATTCTTGGAA
ATGATAGAAATGCCAATAaacgttttttcttttctctttagtTACTGGCG
TTGCAGAGCCGGGTAGTTTATTGGCCATCATGGGAGCCAGTGGTGCGGGC
AAAACAACTTTACTCAATGTTTTATCCaatcaaaatgtaaacaacATGCG
AGTCGGTGGAAAGATCCAAGTCAATGGCAAAAGCATGAAATCGAAAATCA
AGAACATCTCAGCGTACTGTCAACAAGAAGATCTGTTTATAGGAACGCTA
ACTGTGAAAGAGCATCTCACTTTTCAGGTAAGTAGGACCTTGTATAAAAC
TTTGTATACCCAAAAGCCACATTCTATTTAGTTAGAATATTATTGAGTTC
actctttatacctccatgtccCTCTGACTTCACAGCCATTTCAACGCAAT
AAATTAAAAGTAAGCGAATACCACGCATTACTACCATTTCACACTCTCTT
CGATGTTTTATACACCTGATTAGGGTCACTCTTCCCTCTTTGGCATTGAC
TAGTCTGAATCgaagacctctacaaaacctcaGGTAGTATATCTATAAGG
AGCATGAATCCGTTAGTGTATGCAGGCAGCCTAGGTATTGACTTGTTTTA
ATTTCTGTCCCAAGTccgccaaaatattttttcaacatCTAACTGATTTT
TATTGTATAACAGGCACTCTTACGTATGGATGGAACGAACGAGGAAAAAA
AAGCACGTGTTCACGATGTCATGTCACAGGTACACCAATTCACTTTCTCG
AAATCACACACTTGGCTATGCTACAATCTCTTGCAAAATATGTGAGacag
ataaaaaaaagaaaaaagcctCTCCCATCCCCAAAACAATGTTGTTCAAG
GAAATGAGCTGTCATTGCACTCAGCATTTTTTGGGGGGGGATgctgaatt
tttgtaaatttgcaAGGTGTCTcgtaatatttttcaaagtttgtagcttg
tggaaagaatacttttaaaaataagatCCGAGAGAGCCTGCAGTTTATAT
TTTGCCTTTTACGCTCTACAGCATTAGTGGCTTGGACTGCCCTGTGTCAA
AGTTTTGGACGTCAAATTACAAGACGAAGAACTTTGACCACTTTACACAT
ATGTTCAtcttgtttcttttttgttgcagcTTGGTTTGTTGAAATGCAAA
GACACAATTATTGGTGTTCCAGGAAGAATCCGTGGTATTTCTGGTGGTGA
AAATAAACGCTTGTCTTTCGCTTCTGAGGTATATTGAACTTTTCAACTAT
TGCATCCTCTtttgtcacagacccggtaagatttttttcagtcagtggTG
TAAAAAAACGGACTAAGACTCAATGGGGATTAATATTCCATATTTTCTAT
GGCtagggatttaaattcttttgttttcaagtcaggaagattcagtgggg
atgggaaaaatagcataacattttgcagtgaggattggtttatttgattt
tttcagtggggacagaaattggagtacaattttccaccacaccggggacg
atattttggtaaaattttcaatttggatggggttccagtgggtctgtgag
aaggggatgtactCTACATTTTGCTATCTATATGTTGTCTTTTTGACTAC
GGAGTAGCGCTATTATCTTTGCGTTCGATAGAAACCTTAATTTGTCGCCA
TACACGAAAAAGTAGAGTAGAGTCTTCCTCTGTCTGAACtttgttttttg
atacttttctATGACACTGAGTTTGAGACACTCTATTGTAGAGGCTTTTT
CACTGTAATCGATCTAATCCTCCAACATTTTAGATCATTACCAATCCGAA
CTTGTTGTTCGTCGACGAGCCCACATCAGGACTTGATTCGTTCATGGCTG
AAAGTGTAATCACAGCCTTACAAAATATTGCTCGCAAAGAAGGCAAAACA
GTCTTGGCCACCATACATCAACCTTCTTCAGAAACATTTGCTCTTTTCGA
CAGGTATTTTTGCCAATAATAAAATCACAGATTTCACCATTTTCCTTTAA
TCAGAGTGTAGCGTAATTAGCTATTATGACCACTCTAAAGTAAAAGTAGT
GTGGTCGGGTTGAAGAAAACTGGAGaggtatttttgaaagtttggcGCCC
CCTATTAAAAGTAAAGTATCTTTGTAAAACGAAaatcttttgggtatttt
tttctctatttgGCCAAAAAGTGCTTATGCTGATGCACTTTTTCGTACCC
ATTGTCTATCGGCGCCCCCGCCTCCCcaaaaaaaatcgttttacaaagat
atttttacgtttttgctgaCCCTTTCTTTCACAACGCTATTGTAAAGTAC
CTTATAGAATATTACCAGAATAGGATCTAAGGAACTCGCCTGCCGGCCAC
TTTTCTGTTTGCTACGTCATATCTCACTCGATCCAGCGTCAACCCTTAAG
ACTTAAGCGGCTTAAGTGTAGCCTAGTGCTCTGCTTAATCTGATATGCTT
CTTTCTTTCAGTTGGTGAATTTTTGGTGTGCACAAATCTcaatttaaaat
gattttgttttctaGACTCCTGTTGATGTCAGAGGGTCGAACAGCTTTCC
TGGGAAGCACAACAGATGCCATCAGCTTCTTTAGTGGGTAAGTTTATTTA
TCAAGATAAACAGttattcttgttttgaaatactttttaaattattttgc
cACTGTGAAATATTGACTGCATTGTTTTCATGGCGTTTTAAATCTAATTT
AAATGTTACATTACAGCAATCTGAAAGCAAAGTGTCAATCActatttttt
tagtcaaaaaccACTTTTACCACTTTTAATACGTTTCGCTAGTGAAAAGA
GTGGATGAACTTAAACCATTTCAGCACGAGTTTAACCTCAAAGCAATTTT
AAGGCCCATTCGaacatttcacagtcgaaatgtaCCATGGATAACTTTTT
GCGCTCCAATGACGACTTTTCGTTGGTAAAACAAagcttacagaaaaatg
ttaGATATATAATTCACACAAAATGGCCTATAACCAAATACCCGGTTTTG
AAAAGGTGGTCAAAAATGGCCGTTAAATAGGAATCCCTTTAGACATCTGC
TACTTTCGctaattcaaattaaaaatgcccCATCTTCTTGTAACAGAGTT
GGCTATCCAATCCCACCGAATTACAATCCGGCGGATCATTACATTCACAC
ATTAGCCATCATCCCGTCACGTGAAGCTGAATGCAAAGAAAAAGCAAAGG
TAACGATTTCTGATTGGCTGATTAATGTTTTGGTATCATTACTTGTTGTT
AAGTTATTTCTTGCAACAAATCCACAATGGTAGACTAATAGCGTCACCTA
GGGGTACGTGATTTGTGGTTCGTAATGTGGTGTATAGAAAAGTAGTGCGG
AAATGTagagtttttttaaagaggGTGGGAGAGGGGATTTGATAGAATGA
AATAGAATACCTTTTTGGGCCAGGGTTTGACAACACTAAGTTTTATAACA
GAAGGTTGAAAATTGGTAATATGAAAATTTTCTATACGTACATTGTTGAA
ACGGAACGGAACAGAACGGAAACGATTGGTACCATTGGGTTAGTGCGTAA
AATTATAAGCGAAAAAGTATCTTCACACAAAGGGAGAAAATACTAAAAGT
CTTCAGTCTTTCTATTTTAGACCAACCTAACAGTCctataaataaaaatt
gaaaaatatatcgaGTATGCTGTATGACCCTGTCACGTTAGGGATATTTA
GAGTTGTGTCTTATTTTGCTAGAAACTTACGTAACGAATTCTTGATTGCT
TCGCAAACCTTATAATATACCTTACAATACGGCTAGTCCGACCAAATATG
CCGAAAATATGCAGGAAAACCTGGTTTTGGGGTTTGATTGAACAGTTATT
TTTTGAAGTCGAGCACCTTCACAATAAACAATTTCATCAAGTTCACTGTA
CATGCTTCACTTTTTTAGGCCATATGCGACGCTTACGATACTCAATATGG
AATTGGAAAACAACAAATGGAAAATGGAGATAGTAGCAAAGTAGAGACCC
ATCATGAAATCCCTCAAGCACCAAAGTAAGATTTCCTTGCTCAAAGAGGA
AGTTTGTGTTTCGTATTCTTTCATAGTTATCTCTCTCTCTGGTTCGATTT
TCATGGGACAAATAATCTTACTGAAATGGGAAAGAGAGAATTTTTATCTT
ATATCTTTCCATCTGAAGGGACGAGGACTTCAATTTGAATTACAAAAAGG
TTCTAAATAAATAGGTTCGAATAAAAGAGAGTAAGCTGTATTTTTGTTGG
TATATGCATCAATCTCCTTATACTATTCCCGATGTCCTTCTGGATTATCT
AAAAACTGATTTGACGGAGTTTCGTATTTTACCCCAACGGAGTTCCATTG
CATATCGAACTTTGCTTCCTTAAAATAGAAAATGGATCTCATCAACAAGA
GATACAGTTTTCTCTGCTAAACACATTTTAGGTTGTTGAGAAGTGAAAGG
GGTGGCTTATGATAGTTTGAATTATCGCTGTTCCGCTGCATCTCCCTGTT
TTTTCTTTAGATTCAAAGTGGGAATCGTGGGACAATTCCGTGCCGTTCTA
TGGCGCTCATGGATGGCTGCATTAAGAGAGCCGTTTGTTACCAAATTACG
ATTGATTCAATCTGTCGTAAGTACATACAGCTGTATCAAGAAAACATTTC
TAACCGTAAAATACTTATTTCAGAAATACAAGTTGTTGACGTTGTCTCAA
CAATGGTTGACCCTTGaataaaaaattctcattttcctCCTGGGAGAGGG
GATATTTATTTCTTGTCTTGAGCATTGATACTCTTTTTTGAGGAATAAAA
TGGCTTTTTCAATCGATGTATGTAATGGTAAAACCAACAGGGGTTACCAT
CAGGCAATGCCATATTATTGTTTTATATGCTTTTTATTCGAATATAATCG
GGTGAATAACTACTCTGCACTTCTCTTGTCTCGTCCTTCTCCATCGCAGT
GGTTGGTTTGAAAAGtctcaaatcagaaaagacaaCATGACAatagaccc
tctacggcaatgaatgtCAAATTAGCCGCAGATATCGGGTCTGTGCACAG
ACTAGTGAATGACATGTTTTCAAATTTCAGGTGATCGCATTAATTGCTGG
TTTAGTTTATTTGAATCAAGGAAACGAAGGCCAAGATTCTGTTCGTAATT
TAAATGGAGCCTTATTTTTCGTCACCACTACAATGACTTTCAACTCTATA
ACTGGTTCACTATATGTAAGTTTGACAAGAATTATGTTTTCATATTGTGA
ATATCGCTTTTTACATCAACTTTTACATGTATGGTGCTTCAAACGAgtga
tttcattttttccctCAATCTTTTGTCACTAATTATTTCTTGGNACATGC
ATGGTGCTTCAAACGAgtgatttcattttttccctCAATCTTTTGTCACT
AATTATTTCTTGGGTTTCTTTTGTTACGCATGTAAGTTTGACAACAATTA
TTACAATATAAACTTCATCAAGTTTCTACCATCACTAAAATATCACGAAT
ATCACTTCAAGCGAGAGttcatttttgaatttcaatgttttgaaacaAAT
TGCTTTTCGAATCGAATGGAATCAACCTGGGGTAAATCCTGTAAAAGATG
TCGGAGAGCAAGCTTAGccctttttgacaaaaattcataGGTTAGTGTCT
CAGATGTCCCGAAATCACTGAAATCGAGAATTTCTTTCTATAAGGGTCAC
GATTTTCGATTATGACTAAATTCCAGGAAGAATCAcctaaaattttgaca
aaatttctgaaagggTCTctaaaatacaaaacttttctcttgcaaaatct
aaatttttgaattttgacccGGGCATACCCGTCActtcgcaaacctagta
ccccccttaTTTTGTTGGATTTATATATGTACATggttagactggagtcg
tttataatacgtgtaatacagtagtagtataggcgttatatggtattacg
attattgttaccggatttagtttgtataaactaaattGTATAGACTAAAT
TGTCCCCTCCATTACtttctgctttatttctactatgtctgaattagtcg
tctagcttacTAGACTAATACATGGTTGATAATGATGTTTGTTGTTTGAT
TTTTAAGGTATTTCCAGCAGAGTTACCAGTGTTTCTGAAAGAGCATAAGC
AAGGGATGTATCGGACAATGGTGTATTTCATATGTAAAACGCTAGCTGAG
GTAAGTTCACATATAGATTCCTCTGTACAGATCTTTCTTATCATGTAAAA
CACTAACTCAGGTAGGTTCGCTTGAAGATTATTTGTAAAGGTCCTGCTTG
CGGAACCTTTTCACTTCCAAGAATTGgatcacaatttttttgaaatttta
atcccGCTAAGGATCGTTTTCGAAAAAACGGGTCCATATAATTTTATACA
caatttttatgtttgaattCGATACATACACATTTTCAGTGAGTATTAAT
TGCatacttctttatttttgtGCTTTTGATTTTAGCTTCCTTGGTATACT
CTTGGTGGATTCATTTTCTCTGTGATTGTCTATTGGATGGCTGGTAAGCT
AACTTCCTTCAATACTTGATCTGCCTTACATACCCTATACCAGAGAAATA
AAATTTGGAGAAGGATTTTGGAAGGGCTAAACAAACTTTTCCTcaatgaa
attttaattttcagttttacaTCCAGAATTTATCTTGTGTGACATACGTG
GTCATAAAGGgagttgaaaataattttgtggGCTGTTTATCAATTCAATT
CCCGTCAACTTTAGTACTCTTATCAGCCCTTGTTAAAGGCGCGGTCCAAC
ATCATGctcgtgtatcccaggctttaatTACACcactgatggacgccaga
gaatatctAGCGCCATAtagttaaagcataaaaaagctgataatgcgcag
ggaacgaggtcgGGCGTGGGCTTTCCAGGGCTTTCctacaaaccaaattt
tttctttgttttatgttaaatcgcgataaaaaaagcggttttcgtccaAC
AGGCTAGGGCGCGGTCGGCTTTTGTAGGAAACGACgtcaaaaatctttct
tttatgAGAATGACGTCATTCTTTTTGGTAAACTTGAGCCCAGCCTCTTT
TCACTTTAAAGGGTTGATATAAGGGTGAGGCTGCTTTTATGGTAAACTGa
agctgaattatttttatGGTCTACTCATAGGATTACGAGGAGAAGCagcc
aattttttcattttctgtgGAATCGTTCAACTGATCACACAATGTGCCCT
ATCTTTCGGTAAGTGATGAGGTTACCatcttttattttgcttttatgTGT
CAGACGAGGTGATTTTCATTGAATGTTAGGcttcaattttttggaaatac
cTAGAAAAATCCCGTTGGAGTTCAAGTGCGTTTACGTCGTGAATTGTCCA
TAACTAGAACACGCATGAGATCCTTCTGGTTCACACAAATTTTTCCGAGT
TATAGAAATTTCAAggtatggagtaaggtttatggAGCTATTCGAGTTAA
AGGGAATACACTGTACTTATATCTCTGGTTTGGcaataaaattatcaaaa
taagcCATGAATTCGACTTAGATATATTGATATATTCATAGGCTATCCAT
TTCCAAACTTTTCTGGCTGTAAACAGACTGAATAAATCTCATTGAACCAA
aaaacctacattttggggttcACCGACATTTTAGGATGCAGTGCatattt
ttcttattcttaGAGGACAATCTTAGctttatttttttgcatttctgttT
ACAGGATATTTGGTATCAGCCATTTCACCGAGCGTGCAAATTGCGACGTC
AGCAGGCCCTCCCTTGATGATGCCCTTCCTCTTGTTTGGCGGTTTCTTTA
TCAAGGACGAGTAAGTGGATattgttttcatgttttgatgGGTTTCAACA
AATACTTGGGCAACTGGTTTAATCGTATAAGAAGATAAAGGCATAATCTT
CTTCTtctggatttttcaattttttatgaaaaatggcCAAATTTGTAATT
CGTGAGTTCTATAATTTTCACGGTTTTAccgaaaatgaattttaaggTTG
TTTGTTCAACTGTGCAAAATGGAATTTCGCTAGATTTCTCCTCTGTAGGG
TCTTAGTTAGCTCGtacaaaaaaaaagcaaattatGATGTGACTCtgcca
ttttttttttctcaggtCGATTCCCGATTATTTCATCCCACTGAAGTACA
TCTCATGGTTCAAATATTCTTTCGAAGCCCTACAAATCAACCAATGGGAT
GGCTTGACCATTCGTACGTTAAGAACGCTTCTTTTAGTTTTTATCAATAC
AGTGTCTTTCAATATTCTTTTTATTCGGGGCAAAATAAACTCCGAAGAAT
CTCATGATCATTTCAGGTGGGGATATAATTTTTAGAGGAAGAGTTTGTGG
GGGATTCTCGAAAGTCCCTTATTTTTCTAACATCGCTTGATTTTCACTAC
ATTTAGGGTATCCAGAAGTGTAATATTCAAACCCCCAGCAATCAGAACCC
TCTATGgataaaattatataaaagtttattaacaattttttattcataGC
TGGATGTGTGAATTCAACAATTGCTTGTTTCCCAGACGGAGAAGCTGTTC
TCAAATCTAGTGGTTACAGTGCTGTAAGTCATTtctttacacactttttt
ataagaacaaattttataagaacaataggCTGAACATTGTCTAATACCGA
AgaataatttaagaaaaatcCTGAGCCTctgatttcagaaattactttAA
TAGTCAGTAATAGTACTGATTTTTACACATTTTACACCCTCTTTAAGTTT
TAAAGTAAAAACACTATATATTTTAGATATATATTTCCTtgtcaaagaaa
ttcatttttatGTTGAGAAAGGCCTTTTGGCCGAAATATTCATGCAAAAA
AGACGTGTTGTTTTTGATCagttattttatattatatattttatatagcA
TATTTTTTAAAGCctatttaaatttcaaaaaattaagaacagtctttATA
CTGGTATTTACTGGCTCCTATAAAAAAGGTGCATTATATATCTGTCAAAG
CGTTAACACATTCTGTGATCTGATAATCCTACTGAATCCTACGGTGTatt
ttgacgaaattttccagttctactaaaataacatttagATTTTCTATCGC
taccatttttctttattttttcttcaggaCAACATGGGGCTGAATATTGG
AGTTTTGTTCGCCATTGTGATCGGTTTTCGTTTTATCGCCCTCTTGTTCG
TTTTATTACGTGCAAGACGAGCTCGATGATCAAACACAATCgcatgaaaa
acattttaaatgtATTTAGTAGTATTTTAGCCTGTATATGTAtaggattt
ttgatttttatgtttcgtttatattcttttgttcttttatgCATATTATC
AGTCCCGGTACTAATCCGAGAGAAAAATTGAGAGTAAACTTACAGGTTTT
CAGAATCAGATtgaaattttagtcatttttacagttatgttaaattttgt
tttcaccTTTACTAGaaacatggaggtataaagaaacaggagaagtatgc
tattgtaaccatgctcgccctacgattagaaaaattacgaggtatgcatg
ctcataatctcatatatcgtgcatttttaatgagctcttttgttgatagg
tgaaatcttattggctaacttaagtgttNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgcctagaatttcttttgatttattacataaaagaa
atcaaaagactttaacgaccaattaccgacaaattcatctcctgtctttc
tttatacctctatgctaGAAACTTCTTTTAATCCTTTTAAGAATTTTTGC
TGCGCGCCACTTTATCTTGGTTTTATcggagaaaaagatttttttaattc
ccgcatttttgacaaaattgtcaaaattattatttttgtatatattgttt
tttttttcacatcaaCCATAGcatttaaaaagaagaaaaaatgacattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040230XLOC_040230Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064163-exon-scaffold_41-1491911889:211786..211844TCONS_00064163-exon-scaffold_41-1491911889:211786..211844Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:211786..211844TCONS_00064163-exon-scaffold_41-1510915933:211786..211844Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:211786..211844TCONS_00064163-exon-scaffold_41-1575043694:211786..211844Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:212952..213159TCONS_00064163-exon-scaffold_41-1491911889:212952..213159Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:212952..213159TCONS_00064163-exon-scaffold_41-1510915933:212952..213159Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:212952..213159TCONS_00064163-exon-scaffold_41-1575043694:212952..213159Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:213677..213912TCONS_00064163-exon-scaffold_41-1491911889:213677..213912Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:213677..213912TCONS_00064163-exon-scaffold_41-1510915933:213677..213912Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:213677..213912TCONS_00064163-exon-scaffold_41-1575043694:213677..213912Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:214299..214364TCONS_00064163-exon-scaffold_41-1491911889:214299..214364Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:214299..214364TCONS_00064163-exon-scaffold_41-1510915933:214299..214364Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:214299..214364TCONS_00064163-exon-scaffold_41-1575043694:214299..214364Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:214765..214863TCONS_00064163-exon-scaffold_41-1491911889:214765..214863Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:214765..214863TCONS_00064163-exon-scaffold_41-1510915933:214765..214863Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:214765..214863TCONS_00064163-exon-scaffold_41-1575043694:214765..214863Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:215419..215588TCONS_00064163-exon-scaffold_41-1491911889:215419..215588Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:215419..215588TCONS_00064163-exon-scaffold_41-1510915933:215419..215588Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:215419..215588TCONS_00064163-exon-scaffold_41-1575043694:215419..215588Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:216151..216222TCONS_00064163-exon-scaffold_41-1491911889:216151..216222Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:216151..216222TCONS_00064163-exon-scaffold_41-1510915933:216151..216222Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:216151..216222TCONS_00064163-exon-scaffold_41-1575043694:216151..216222Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:216732..216834TCONS_00064163-exon-scaffold_41-1491911889:216732..216834Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:216732..216834TCONS_00064163-exon-scaffold_41-1510915933:216732..216834Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:216732..216834TCONS_00064163-exon-scaffold_41-1575043694:216732..216834Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:217554..217660TCONS_00064163-exon-scaffold_41-1491911889:217554..217660Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:217554..217660TCONS_00064163-exon-scaffold_41-1510915933:217554..217660Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:217554..217660TCONS_00064163-exon-scaffold_41-1575043694:217554..217660Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:218146..218251TCONS_00064163-exon-scaffold_41-1491911889:218146..218251Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:218146..218251TCONS_00064163-exon-scaffold_41-1510915933:218146..218251Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:218146..218251TCONS_00064163-exon-scaffold_41-1575043694:218146..218251Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:218716..218850TCONS_00064163-exon-scaffold_41-1491911889:218716..218850Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:218716..218850TCONS_00064163-exon-scaffold_41-1510915933:218716..218850Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:218716..218850TCONS_00064163-exon-scaffold_41-1575043694:218716..218850Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:219743..219835TCONS_00064163-exon-scaffold_41-1491911889:219743..219835Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:219743..219835TCONS_00064163-exon-scaffold_41-1510915933:219743..219835Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:219743..219835TCONS_00064163-exon-scaffold_41-1575043694:219743..219835Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:220121..220178TCONS_00064163-exon-scaffold_41-1491911889:220121..220178Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:220121..220178TCONS_00064163-exon-scaffold_41-1510915933:220121..220178Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:220121..220178TCONS_00064163-exon-scaffold_41-1575043694:220121..220178Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:220816..220893TCONS_00064163-exon-scaffold_41-1491911889:220816..220893Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:220816..220893TCONS_00064163-exon-scaffold_41-1510915933:220816..220893Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:220816..220893TCONS_00064163-exon-scaffold_41-1575043694:220816..220893Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:221390..221495TCONS_00064163-exon-scaffold_41-1491911889:221390..221495Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:221390..221495TCONS_00064163-exon-scaffold_41-1510915933:221390..221495Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:221390..221495TCONS_00064163-exon-scaffold_41-1575043694:221390..221495Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:221801..221898TCONS_00064163-exon-scaffold_41-1491911889:221801..221898Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:221801..221898TCONS_00064163-exon-scaffold_41-1510915933:221801..221898Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:221801..221898TCONS_00064163-exon-scaffold_41-1575043694:221801..221898Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:222185..222258TCONS_00064163-exon-scaffold_41-1491911889:222185..222258Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:222185..222258TCONS_00064163-exon-scaffold_41-1510915933:222185..222258Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:222185..222258TCONS_00064163-exon-scaffold_41-1575043694:222185..222258Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:222813..223154TCONS_00064163-exon-scaffold_41-1491911889:222813..223154Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:222813..223154TCONS_00064163-exon-scaffold_41-1510915933:222813..223154Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:222813..223154TCONS_00064163-exon-scaffold_41-1575043694:222813..223154Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1491911889:223958..224134TCONS_00064163-exon-scaffold_41-1491911889:223958..224134Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1510915933:223958..224134TCONS_00064163-exon-scaffold_41-1510915933:223958..224134Clytia hemisphaericaexon
TCONS_00064163-exon-scaffold_41-1575043694:223958..224134TCONS_00064163-exon-scaffold_41-1575043694:223958..224134Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:211786..224134 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.0034	1.49728	0	1.72229	2.61787	2.13806	22.436	26.5071	8.23677	4.97844	4.2876	7.98027	4.79375	0.116114	6.17939	7.56596	21.8893	12.8167	0	1.52814	15.8879	6.04998	10.0891	8.80299	7.10815	5.89027	39.6178	42.7873	1.32173	2.72132
Blast
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BLAST of TCONS_00064163 vs. Swiss-Prot (Human)
Match: ABCG2 (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 255.758 bits (652), Expect = 8.982e-74
Identity = 183/548 (33.39%), Postives = 291/548 (53.10%), Query Frame = 3 
Query:  249 KPILKNVTGVAEPGSLLAIMGASGAGKTTXXXXXXXXXXXXMRVGGKIQVNGKSMKSKIKNISAYCQQEDLFIGTLTVKEHLTFQALLRMDGT--NEEKKARVHDVMSQLGLLKCKDTIIGVPGRIRGISGGENKRLSFASEIITNPNLLFVDEPTSGLDSFMAESVITALQNIARKEGKTVLATIHQPSSETFALFDRLLLMSEGRTAFLGSTTDAISFFSGVGYPIPPNYNPADHYIHTL-----AIIPSREAECK---------------EKAKAIC--DAYDTQYGIGKQQMENGD-SSKVETHHEIPQAPKFKVGIVGQFRAVLWRSWMAALREPFVTKLRLIQSVVIALIAGLVYLNQGNEGQDSVRNLNGALFFVTTTMTFNSITGSLYVFPAELPVFLKEHKQGMYRTMVYFICKTLAE-LPWYTLGGFIFSVIVYWMAGLRGEAANFFIFCGIVQLITQCALSFGYLVSAISPSVQIATSAXXXXXXXXXXXXXXXIKDESIPDYFIPLKYISWFKYSFEALQINQWDGLTIPGCVNST 1814
            K IL N+ G+ +PG L AI+G +G GK++LL+VL+ +   +  + G + +NG    +  K  S Y  Q+D+ +GTLTV+E+L F A LR+  T  N EK  R++ V+ +LGL K  D+ +G    IRG+SGGE KR S   E+IT+P++LF+DEPT+GLDS  A +V+  L+ ++ K+G+T++ +IHQP    F LFD L L++ GR  F G   +A+ +F   GY      NPAD ++  +     A+  +RE + K               EK   I    ++  +      Q+  G+   K+    EI     F      Q R V  RS+   L  P  +  ++I +VV+ L+ G +Y    N+    ++N  G LFF+TT   F+S++ ++ +F  E  +F+ E+  G YR   YF+ K L++ LP   L   IF+ IVY+M GL+ +A  FF+    + ++   A S    ++A    V +AT       +  ++F G  +   +I  +   L+Y S  +Y F ALQ N++ G      +N+T
Sbjct:   61 KEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPS-GLSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQ-FIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMS-KQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTSF----CHQLRWVSKRSFKNLLGNPQASIAQIIVTVVLGLVIGAIYFGLKND-STGIQNRAGVLFFLTTNQCFSSVS-AVELFVVEKKLFIHEYISGYYRVSSYFLGKLLSDLLPMRMLPSIIFTCIVYFMLGLKPKADAFFVMMFTLMMVAYSASSMALAIAAGQSVVSVATLLMTICFVFMMIFSGLLVNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPGLNAT 598
The following BLAST results are available for this feature:
BLAST of TCONS_00064163 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCG28.982e-7433.39ATP-binding cassette sub-family G member 2 OS=Homo... [more]
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