TCONS_00063679 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063679
Unique NameTCONS_00063679
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063679 ID=TCONS_00063679|Name=TCONS_00063679|organism=Clytia hemisphaerica|type=transcript|length=2119bp
gtctcttttctcaagctaaaattttcattaaattctgACCGTATGATTTC
TAAACttctatcaaaatttcaaaggatttccaagtgaaaatatttttctg
agaGTACCCTCTGTTCTGTTTCTGAAAGAAGATCAAAAGAGCTAAAACCT
TTTGTGtttattacaaatatttttatttcagtaaAAGATATCATAAATTA
CATTCTCACATCTGCCCTGTTATAAACATTTCGGTAACTTCCAATTCCAT
TATATCTCTTGAAGGTATGTTATTGTGTGGGGtaataaaattaacaaaat
taaaaaatacatttgtacaatttctttttaacattttacgaAGTCTTCTC
TTGTTGGATAGCTTAAAGAGAAAAAAGACGATTATCATAATGCTGTAATT
TGATAGTCAACCGATTTTGACACGAGCATGCGGAAGTGGGCGTTTCCCTT
TACGAGAGGAAAGTTTAGAGTTCAGATTACAAACTAAAAGTAGAAAACGC
TCAGAAATATATTTCCCATTCTGGAAAACAACGTACAACGAGAATTTACT
TACTCTCTTTGCTAGGTAAGGTATTTTTTTCTTGAGTTTCAGtcttcttc
aattttgttttgtcgAAAGTTGAAACTTCAGAGATGTCTGGTTTGTCAGC
CATTTTAGTTTTCGTGAAGTGATGATAACAAACTGtaaagaaaaagttaa
attaagatatataaagaaaaaaaatacatcTTAATCCTGGTTGATGAAAA
CTTGTAGTTTGTCGTCTAAGCATAATGGTAAAGATACTCACTTTTCGACA
ACAGAGACGTCCGTACTGCAAGATTTCAATGCGTTGTGATGTTATGAAGG
AGGCGTTTCATCCATTTATACCACGCTGTAATGCAATTTTTTCCTTCTCA
TGTGGTAAAGAGAATTTACATTTTGATCGATGTATGGTTGTGCCTAAAAT
GTCGATTGCATCTGAAAATagttgattttttgtttttttgttttagtcAG
TTTAACCATAGCTTGTTTTCTTTTctaattgttttcatttttttaacggA
GACGAGTTCATTTGCATAATGTTCAGACTTGGcgggaaatataatttttc
gtAACCGAACGTTTCGTTAGCCGGcataatcaataaaaacacaACAACAA
ATATGGCGGATGAAAAATGGTCCacacaaaaaattaaatcaagaATTGAA
GAAAACGAACTAGATCTCAGTCTCTGTGGGATCTCCAAAGTACCCGTACT
gaatttgcttCCGTTCACTAAAGTTACAGTTTTGGATCTATCATGCAATA
AGATAAACTCAATACCTgatTCATTTAGCCGACTTGACCATCTTGTTCAA
ATCGATTTGAGTAAAAATGCCCTTACCGAGCTTCCTAGTAATTTTGGAAA
TCTAGGGAAGTTGAAAAGATTAGATTTGTTTCAAAATCATCTCGAAGAAT
TACCAATAAGCTTCCACAAGCTAAAAAGCTTGAGTTGGTTAGATCTCAAG
GCGAATCCCATTCAAGAGCGATTGCAAACAATTGTTGGAGACTGCCTAAA
ACCTATCGAATGTCAAAGTTGTGCAAGAAATGTCGTTTCCTACTACAACA
ATGTGTACAAGGAGAAAATGCTGCAAAAAGAAAAGGAGCTCAAACGAGAG
CAAAATAGATTAAACAAACTACGTAAAGAAGAAGAGCAGATGAAGCTGaa
gagaaaagaagaaaagaaacaaaGGCTCGAAGAAGAAAAGAGGAAGAAAG
CGACCACTACACAACATCAAGATCAAAaacaAACTACATCAAAAGATTCT
TCAAGTGTAAAAGAGACAATAGATTCCAACGGCTCATGTGGTAGTTGGTT
CTACCTCGTCATATTTCTCATATTGATTGCTACCGGTATCGCTTTTGTTC
TTCTCCATAAAGATGCTGTTCAAATtaggatatttttttctgagTTGTAC
AAAGGTTTTTCTAGAAAAAGATTTGAAGAATTATAATGTAAAAGCTTTAG
CTTTTATTTCATGCTTTCGCCTGTCAAAAGAAATGTTTAGtctcattttt
ggaattttttaatggaaaaGTGATAAAAATGTTACCAAAAAATGCTTTAT
AAAAGAAGGACGAAGGGTG
Run BLAST on NCBI

protein sequence of TCONS_00063679-protein

>TCONS_00063679-protein ID=TCONS_00063679-protein|Name=TCONS_00063679-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MADEKWSTQKIKSRIEENELDLSLCGISKVPVLNLLPFTKVTVLDLSCNK
INSIPDSFSRLDHLVQIDLSKNALTELPSNFGNLGKLKRLDLFQNHLEEL
PISFHKLKSLSWLDLKANPIQERLQTIVGDCLKPIECQSCARNVVSYYNN
VYKEKMLQKEKELKREQNRLNKLRKEEEQMKLKRKEEKKQRLEEEKRKKA
TTTQHQDQKQTTSKDSSSVKETIDSNGSCGSWFYLVIFLILIATGIAFVL
LHKDAVQIRIFFSELYKGFSRKRFEEL
Run BLAST on NCBI

transcript from alignment at scaffold_398:46329..61656+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063679 ID=TCONS_00063679|Name=TCONS_00063679|organism=Clytia hemisphaerica|type=transcript|length=15328bp|location=Sequence derived from alignment at scaffold_398:46329..61656+ (Clytia hemisphaerica)
gtctcttttctcaagctaaaattttcattaaattctgACCGTATGATTTC
TAAACttctatcaaaatttcaaaggatttccaagtgaaaatatttttctg
agaGTACCCTCTGTTCTGTTTCTGAAAGAAGATCAAAAGAGCTAAAACCT
TTTGTGtttattacaaatatttttatttcagtaaAAGATATCATAAATTA
CATTCTCACATCTGCCCTGTTATAAACATTTCGGTAACTTCCAATTCCAT
TATATCTCTTGAAGGTATGTTATTGTGTGGGGtaataaaattaacaaaat
taaaaaatacatttgtacaatttctttttaacattttacgaAGTCTTCTC
TTGTTGGATAGCTTAAAGAGAAAAAAGACGATTATCATAATGCTGTAATT
TGATAGTCAACCGATTTTGACACGAGCATGCGGAAGTGGGCGTTTCCCTT
TACGAGAGGAAAGTTTAGAGTTCAGATTACAAACTAAAAGTAGAAAACGC
TCAGAAATATATTTCCCATTCTGGAAAACAACGTACAACGAGAATTTACT
TACTCTCTTTGCTAGGTAAGGTATTTTTTTCTTGAGTTTCAGtcttcttc
aattttgttttgtcgAAAGTTGAAACTTCAGAGATGTCTGGTTTGTCAGC
CATTTTAGTTTTCGTGAAGTGATGATAACAAACTGtaaagaaaaagttaa
attaagatatataaagaaaaaaaatacatcTTAATCCTGGTTGATGAAAA
CTTGTAGTTTGTCGTCTAAGCATAATGGTAAAGATACTCACTTTTCGACA
ACAGAGACGTCCGTACTGCAAGATTTCAATGCGTTGTGATGTTATGAAGG
AGGCGTTTCATCCATTTATACCACGCTGTAATGCAATTTTTTCCTTCTCA
TGTGGTAAAGAGAATTTACATTTTGATCGATGTATGGTTGTGCCTAAAAT
GTCGATTGCATCTGAAAATagttgattttttgtttttttgttttagtcAG
TTTAACCATAGCTTGTTTTCTTTTctaattgttttcatttttttaacggA
GACGAGTTCATTTGCATAATGTTCAGACTTGGcgggaaatataatttttc
gtAACCGAACGTTTCGTTAGCCGGcataatcaataaaaacacaACAACAA
ATATGGCGGATGAAAAATGGTCCacacaaaaaattaaatcaagaATTGAA
GAAAACGAACTAGATCTCAGTCTCTGTGGGATCTCCAAAGTACCCGTACT
gaatttggtaatttttttttttcgttgaaTTTTTCTAACGCTTTTGTTCC
ggacaaagccttaaaaaaactttctctTTTAATGACAGTTGCAACCAGTA
CCAGTCTAGTTTGTGACCGAATTTTTTTGAaccagaaaagtcatacaaat
aTAAcctctggaaaatttcttttagtAGTTATCTTTCTTGATCTATTTCC
tgtactgtgtaaaaaaaattgtagaaaAGAATGTAAAATCCGAACGATCC
AAGCTTGCGCGGACACGGAAGGAcctgaaaaaccttttttttttcgaaaa
agataCAAAACGGCTACATACTATACatatggacaaaaaagcttcatAAG
AAAAAATACTTCAACTGCCATTCCTAAAAATACTTTCAGTGTGGCTGCAA
TCcttcagatccttggttagaaaaagctataccgtcaactgctctaactt
gccttggggacgattggtcgaaacattacatgggactggttgatgaGGGG
GGTCAACAGTGCACGAACGACCCCAGTGCACGAACAAGCGTCTTTGAACT
TGaagaaacaaccaaaaacaaacttctatagaacttcctttgtgcagcag
aatcctcaaactatcCCTAGCAATCTGtcccaaaaattgaaataaacgga
gcactaccgtgagattgggtaacttgcatcagtggaggctaacatcagtt
agggaaaccatccaggatcctgccattctatcagccagcaaaaactgaat
gacacttgtaaacttaagtttgttaccattttccatcgaaataatcgaaa
acattactacttctcaaagccggagaccaaagcaaatgatctttcttgat
gagggcgcccttttggatctattgttaactcatttaaaatggtggacaga
gttgcggAATGACGAAGGCGCCCtctgcttcgagggtggtaactccaaaa
cgcccaatatgaccagccaacagaaggcgagtttgttgccgcgcgagtta
cgtcatgcactccggtatagtggtcattgaccttggttactgctcaggcg
actgaggttcgattcccactcgcagcggttcacttggcaagtgaatgaac
cttcacccgggtcaacccatgccatgtgaggggaattgggtNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTgtgtagtcagtccaaggtgctgacggggcgctcattgaaag
cgtctatagttgcgaaaataggccttaaagcctcctgcaactcaaccaaa
tagaaatagaaactcCACCGTAGCAAAAGGGCGAACgacatttcacaatt
ataagaatatcttaatgTGCTTAACTCTATTTAACTTTGAGAGCTTCatg
gaagatgaagaagtagaaagatgaaaaatgcgctggtcaatttttttaaa
ataggtgtgttctatcattgttgaaagttgaagaaatttctaccgacgca
taatttttttacagccaattaaaggcacagtctgcttatacttactatgt
ttgctatatcatctaggcaaaaaacggtaaaaaaaagacacaaacacaat
ttttttatgagtgtggttatgatttttttgattgcagccgcgtacaggaa
ctcgccaaatgttcctaactgaacatgcatagccctcaaatgaaagacct
ggctggtcattaaaatacaactacgcagctctgcttgcagctctactcta
ccatttttgttttgatttaattttgtatattgatgaccagccaggtcatt
catttgagggctatgcatgttagcctccactgatgcaagttacccaatct
cacggtacgtagaacaacaccaaaccgattttgaaccaaaccaagtaaaa
aaatcacgaaatttgggatttttgtaaacatggctGATTGCGAgaggaaa
tgttttttataagaaaatttgcagaagaaaagttctgaaaatgactttcc
tcttttaaaaacctgttatcttccatcacacaaaatttcattgggcggca
atcaaaaatatggtccattcgggtcctaaaacatcttcaaatccagtcgg
tcggtcggtcggtcggtagtaaattttgtcggatttttaagatctagtaa
atcccgatgaatcaagtcggcaatcaacatgaatcttatgccgccatctt
taatttgccaaactaaatgtgCGCGCGCATGTGTTAACCTTAAAGCGGCC
CTTATTTTTGGCCCCCAGGATATTGGCCCTACCGTGTTGCTgaattttga
catgaaattttcaataagggtacatgaaaaaacttgaacggtactcaatg
tgggttaagtaaacaaagaataaataatgattcaaagacaTGCTCCGTTC
GCCCGTGCCCGCCTTTATGGGAAAGATCCGAACCTGCGAACAGCGCCCAA
AAAAACCTGACATTTTTACCGACTTTCCGAATCgggttttcttgtaaata
tttgtaaacatatttttgattgcagccttgaaacatgttagctcattaat
tcaaaatcaatagaaacatatcaccagtagttgatataaaaaaggttccA
GTCTGCGAACGATCCAaacaccatattcaaaatgaagacattgcaacgtc
aaaacattcgaaagcactggcgatctcaattaagaaagaagacactacat
tgccgcacttttcgatgagcaaaatacttgaaaaagaaaacaaaaaaatg
gatgacaagaaaatatttacaaaaataaacaggttagtaaaacgctaaag
ttcttataaaaaagatgcttttttggtgaaaaagcgCATGggtttgaaaa
gttcaaatacccctgtatcatctcggaagagagttaaagtattacctgcg
agcggagttctaattttttcttttaaaaggtcGTTCGCGCATTGGTTCCT
CGTTCGCGGACTGGGTCCGAATAGCGCTCGCTTTAACgacttattattcc
aagaagaagccttcaaataaagtgaaaacaaactgaaagaagNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaag
tgaaaacaaactgaaagaaggacttcaagcttgtttacgagatggtcaaa
aaggatttatgtaaaaaccaaaagtaagtgagaaaagagaaaaataactt
TGCTGTCGTGCACTGGGCACCCCCCtctatctggcctgtattttcactta
cttttaaatctctttgacaacaaatttgttttgataactccaccaagttt
attaatcatacttcttcgttcctcttagagtacacagacactcgcgtgtg
ttccatcacagatttttttcatattttgatttaaaagcctattggtacaa
aagagaaatcgtgtattttttaatacgccgttcatttactcaaatcaaat
gactttagaaggtttggtgaaatggtggccgaattgccgtcccatgtttt
gtcagatagtcccaagttagagcagttgacgatatCTGTTTACGTTTTTC
TTGTCAGTTTCAACAAGCCATCACCTAACAAAATAACACTGAACTGACAC
CAAAAAATTCATACAACCTTTCCGCAGTGAACAGTactaaattatctgcc
attatgaagataTTCTGAAACTAACCAATCAGGTTTACAGTCTGAATTCC
TCTGGGAATTAGCCTGTTAGCAAGccgaaaaatttaaagttaTGTAATTG
GAAAATTCTTTTCCTCCCCTGGCGGTTCAACATATAATAATAAAGAAACT
ATACTTTTAAAATGCCTTAAAAATAATTTGGTTGTGATTATgggatggtg
aaagtttgattgataaacttagtcaaagtatcaaaacaaacttgttgtca
aagagatttaaaacaGTAAATGATAATACAGGTAAGATATCAAcaatccc
atgtttcgaccaattgtcccaagttaaagcTGTCGGGGGTAATTTCTACC
TCTAAGATTGACACAATTCACACAAGCCTTTGTTTTGGCCCTCGTTTCGT
GCTTACACACTAATCATATGTACAGTaatggttaaaaaaaattgaaattt
gacttAAAAAGTTATATTATGTATAATTACGTTTTAATATCATTATAAAA
ATTGGGGTTACACGTCCAGCATCCATGGAGaaactctaaattttcgccat
cttgaaatttatgatcttgcatgattttttttatcaaaccagGCTGCTTT
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtagccttgattggaaggttcttattaaaaacccaattaaaaaatgtt
attttctcattttcagcctcagcatgtttcttagatgtttcttagttttt
aggcatttcttaaaaaaaaagacgtgtattcaCCTGCGATTCTGTCTGCG
AGTAACTCTCCAAAAATACTCGCGTAGCAAATATAAGATcctaaaatggt
agagtagagcttcgAGCGCAGCTGTATTCATTTGTTTTggaattttgctg
ctttgattggtcaggcatttgatggctatgcaagtttccctctactgatg
caagttacccaacttcaaaGGTCTTGAAACTCGCTAACTCAGTTACTAGT
TTTGAAAATCAACAAGTTTAGTGAACAATAATTATCCCTCTTTCTTAACA
GCAATCTTTGACCTTTTTTGCTCACTTTTCTTAATTGCTTGCATCAACAT
GACTTTTCTGTCATTTCTCAAATGAAAACAGAAAATCGTGTCAAAGCTGC
ATATCAAGAATCATTTTCAACatgaaaaattagaaagaagaaggataaac
ttaaattttgaggggtcgtttgttaaatttggtcacctagatcaaaagtt
tagTCTAAATGCAAAACATTACtttcaaaaaagtcgaaaaaagaggaaaa
atgaGAATATTAAATTTATTGTATGACAAGACactattgtttttttattc
atcaGGAAATGTATTTCAACTTTCACCAAAGCACTTACTTACACAATTAA
CCATTCCTGCAAAGGTGTTTCGAATCATTAAAGGGTTGAGATTAGGCCGa
ccctaaaagaaaaaaagtttccggtccaccggtcgggtgaaatttttttt
cgttgtcACTTGGCcgcattttttttcataagaaccaaaAAGATAACAGA
TGAAACTTTCTTAAAAAGCTTTACTCATGACTCATTCAAACTGTTACACC
GTACCTATATTTATATAAcactcttcaaaaagtttgtttatctAGCATGC
TTTCTGGAcgttaaagatcaaataaatagtgttatacatattaaatcaat
ttattagaatgaaaagttagttgattcttagaaaaaaaaatcacaaagta
CAGCTTTTTGCAATTAATAGCAACACATTTCTTTCagtgaaagagagaaa
aaatataaagacagAATGTGGGACAACACTAACAACCAgagagatgattt
ttttcttcctatttttttttattagaaatcatgaaaaggaccaaaaaaaa
aattttcctggcCGCCcgcatgactttttttttcgtcacccggtggaccg
ggaaagaaaaaatttttagggTCGGCCTTACCTGCAACATTTCTGATTGA
ATCTTTCAATTGATCAAGGGTTGGGATTGCAAATTTGTAAGTTGATCCCA
GATTTCTTGTTTCGTGTAACCCCACAGATCAGGCAAACTGAGGGGCCACT
CAACATCCCCTCAACATCCCCTCAACGTCCCCTCGATTGTTGACCACCTT
TCTTGGAATCTGGCCACGAATAGGACAAAGGGACTTTGATCGTTAATATA
TTGATAAAAGAAGAATAAGATTTAATACCctcattttcgtattttttaaa
cttttttgaaaagtaatgttttagcatttaggccATAGCCCTTtatctag
ttgaccaaatttaacaaatgacccctcaaaatttaagtttatctctTTTC
AATGCAAATGTATTGATTCTTTAACAGTTCATAAAATGCGAGAACATTCA
CTTCAAATAAcgggacttttttctgggacacccggtatgaAAGCAGgctt
tgaaagtaatttttgctTATAATTCAAAAAGGTAgtatatttccaaaaaa
ttgaaatattctgcTTTTCTAAAACGCTTAGCTCAACTGGTACTTTTATA
GATATTCTGAAAAAAGAGGTTGTTAAAGTCTTATTTGTTAATGCCGTAAG
ATAAGTTCAACTTTAGAACAAAGCTGAGCCTAAAATTGCTAAATGTCATA
TAAAAATGGGCATAGATTTGGAACAAAGtggcaaaaaaataagaacagtc
gaaCCTCAGCAAAAATGTACCGACTCTTATAAAGATAgtgtccaattttt
tttcagtgcaGGACATTTTGTAGTTCCTAACGGTCATTCTGAAGCTTACT
TTTTCATTTCTTCTGGTTAAAATTTGAAGGCTTGTTATAAGCTTCTTTCC
TAATTTTAAATCATATTACATTTCTTTAGCTccctttttaaatgaaaacg
GGTGTTTAATCAGAGCGCCCCAAATCCCCTGCTCAAATTATTCTCAGTTC
CCAAAATTACCAGCCAACTGATGattccttatttgcagcactgcatTTAC
TCTTTTCTAACCTTTCCCTTGGGAAGCCTTGAAGCGTACCCTTAAGGGTT
ACACCTTTGGTCATTTATCTTACCTTGAAAGTCCACCAGGTATAGCACCT
CTCTTTAAGTAATCTTCCCAAATAATCAAAATAGACttgaaacaattttt
atttctattcattttaaaagaaagttaattTTACTCTCAAATTTGCCTGG
CTGTTGCATTATTACTTGATTAACTTGAAATAGTCAGAGGTTCTTGTTTA
CcttctaaataataaaatacaagaaaagATATCTTacaagaattttgaaa
ttgaaatgcaTAACCgcggattcaaaatttcctTGACAGGACTCCTACAA
TTTACTAGACcaaagataagaaaaattattcaGGAAAAAATCTTGCTTGT
TAAAGTGTTGTACTTTTTGTACAAGTCCATCAAGAACTTTATGCTGATTA
AGTTCTCACAATTAAGAAAACAAAAGTGCTTTATATCTTCTAACTGGGAA
ATTTTTGACtgtttcatcttttttttcaattttagcttCCGTTCACTAAA
GTTACAGTTTTGGATCTATCATGCAATAAGATAAACTCAATACCTGTAGG
TGAATTCCGAGACTGTTTTGACTTGTATTTGTGCCCTTTTACCATCACTA
CTCATACTCAAGTTAACTAACTCTGCTACTAGTTGAGCTTCATTGTCTAT
ACCTTTGGATGGTTTGATATAGGATCATGATATTTTTAATTTGGAAAGAT
TCAATAATAGTTACTTTTCAGATTTATTTTTAAACCCTCTTTTTCAGTCG
ATGACATTGGTCGAAACatccaaaaatatatttgatattttattttcagg
atTCATTTAGCCGACTTGACCATCTTGTTCAAATCGATTTGAGTAAAAAT
GCCCTTACCGAGCTTCCTAGTAATTTTGGAAATCTAGGGAAGTTGAAAAG
ATTAGATTTGTTTCAAAATCATCTCGAAGAATTACCAATAAGCTTCCACA
AGCTAAAAAGCTTGAGTTGGTTAGATCTCAAGGCGAATCCCATTCAAGAG
CGATTGCAAACAATTGTTGGAGACTGCCTAAAACCTATCGAATGTCAAAG
TTGTGCAAGAAATGTAAGTTATGTTAATTGATCGAACATTTCAATGTCAT
TTTATCGTGTTTAATTTATTATTCTATCCAGTTTAatggttttctctttt
ttaaacGGTTTGTGGGTGAGCTATTAATCGTTGCTTGACAAAATAATTTC
CCTGACCACGGTCCTGGCTGATTGTTCTCACTAAAAATTATATCAGACAA
ATTACATTTCACTTGATTGATTCTAATACAAGGTTAAGTGATAAGGAAGA
TGATTTATTTAATGACTTTCTCGGAGCAAATTCATTATAATAGCTACGAA
TTGACTCTctattaaaatcttaaaagtgAGACATCCATGCTCTGgtcttt
taatttttatcttttctcaAGATCAGTTTGTTTGACGTATAGGATTTGTC
ATAATATGATGGATGGTTTCCTTAATGACATTTTGACGGTCGGACACTCA
AGGAAATGACTTTCCccttaaaaaattcgaaacacTATTTTTGGCATTTA
GTCATATCTACGTATAATAAACACTTTGTATCACTAAcgatgagattttt
ttctcaacaaaGGGTAGACGTTTAAGGAATAATTTTGATCATACTTCGCC
CTGTCGCTGCTTTACTTGCTATTTCATGTTGAGTAAACTTTAAACAGATC
ATGCCATGTCAGTGCCAACCCTTCTCTGTTACAAGTGGTCatgctttcat
ttttatttatttaacatGATTATTGTGACGAGAATGATGCCAGTTTGTAG
TTagaaacaacattgtttcaTAAACTTCCTACTTATACCATATCATCACG
TTGATTATATAGAAAACAAACATTTCAAAGTGacatttagaaaaaatatt
catCACATTAGTCATTAAGTACATAAAGCATCTCGTAAATGTTATTTTTA
ATGCCATCACCCAAAGCAAAACGATTTTTCCTATTCGCCTTTATTCCATT
TTGAAAATCGTTATTTCTCTCAGCTTCAGGTAATGGTTGGcatgattttt
tgcaaatttcagCTTTCTCAAAACTATCCTCATTTAGCTTGTTGTTTGAG
ATCTAGCTAAAAATTACTGTTTTCACCAAATGGAACCCGCTGTAGAGAAC
ATGGTGAGGTTCTCAGCATGTTTATTCTCGAAAAACTGCTCGAGTAAACC
GGtggaaaaatatctttttttttcttttttcttaatcaatcagatttcat
taaaactattttgaaaaagtaatcGCCAATTCAAAGAATGATTATTGAGC
GTGTTTGAACTTGTTTgaactcaatttttttaaacatgatTTTTGATACT
TTAATAAAGGATTCTCATCTGCTTGTTTTATTAAGATTTTCACAACATGA
TAGGAAACTCCATACATTCCcgtttttctttcctttcataAAATTTACGA
AATATTACCATGGAATGAACATGGTGATTGCACTGATTGTGAAATGTCAT
CCTGGCTGGCCTCAACAAAGCTTTGTTAACGTCAGTGCTATGCCAATAAG
TAATCATCAATATTTGTTAATAAATAAAATGCATTATTCTTATTTCACTT
GCCTGTTTTACGAGAAAATTCGAGCGCGTGGTAGTCTTTGTCTAATTATT
TTCCTTAATTTTCAAAGTTACCTTGACTTGACAAGGAAATTTTTTAACAC
AACCCTTTGGGCTTCACTTTACTTGTTTTTTGACATGTACGGAGAGGAAT
TTTTTGCTCTTACGCTAATTGCTTATAATGAGATTTTACAAATTAATGGG
CTAAACATTTTCCATGCTTGTTTGAATCTTCTTGAAAACGTATATACaag
gataaaaataaaacattattAGAATAACACCGCTCTGAGGTCAGTGATTT
ACAACACTGATATTGTTTCCTTAACACTGATAAAATTCTTGCTGTTAAAA
GAAAAACCGTTCAGTTTAAAGGCAATTTATTACACGATGTAACGGAATAT
TTTCTATCATAACTCTGAAAGAAGCCATAAATCGGAAGGAAANATTAAAG
GCAATTTATTACATGATGTAACGGAATATTTTTCTATCATAACTCTGAAA
GAAGCCATAAATCGGAAGGAAAAAGAGACAGACTATTAGTGGATTGTCTT
TTAACTGTTAAAATGTTAAAATCCACAACGGTTTTTTACTCATTGAAATA
GTTTTCCATTTTCCATCCTCATCGGAATGCTTTCCGATACCCAAGCGTTT
TTGTCTAAAAAAGTGGATTCTTTTTAGAAATAGAAATCCAGTTAGAGGCA
GTCTTTAATCACAAAGAAATGTTCAGTTCGTAGAGTGCAGGAGAGATCCT
CAAAATGGCATAGTATCAGGTTCATTGAATTTTAAGCCCCGAAGGGCCTA
GAGATGAATCTTccacctttctcaagcaagaaaaagtaaagacTCAAGAT
TTGCGCCATACcttgtcgggggaaagtgacgaaaattttgagggggtgag
gaaaattttccccgacgaaatttatacccgacattttatcacccgaccaa
aacctttacccgatttttttatcctcgaccaaaacttttactcgaccccc
cccccaaccaaaattcaaatcaaaattttctacgCAGTAACCGAAactag
tgctttaaacgtcgaattacaagatctatcTTCGAGCTACAATcaaggac
aaaatacttggcacaaaagggaaattcaccggggtgttttgaaaccacaa
tcgatttgtaagtgctctaaagtttttaactctgagtttttaactctgag
tttttaactctgagtttttaactctgagtttttaactctgagtttttaac
tctgagtttttaactctgagtttttaactctgagtttttaactctgagtt
tttaactctgagtttttaactctgagtttttaactctgagtttttaactc
tgagtttttaactctgagtttttaactctgagtttttaactctgagtttt
taactctgagtttttaactctgagtttttaactctgagtttttaactctg
agtttttaactctgagtttttaactctgagtttttaactctgagttttta
actctgagtttttaactctgagtttttaactctgagtttttaactctgag
tttttaactctgagtttttaactctgagtttttaactctgagtttttaac
tctgagtttttaactctgagtttttaactctgagtttttaactctgagtt
tttaactctgagtttttaactctgagtttttaactctgagtttttaactc
tgagtttttaactctgagtttttaactctgagtttttaactctgagtttt
taactctgagtttttaactctgagtttttaactctgagtttttaactctg
agtttttaactctgagtttttaactctgagtttttaactctgagttttta
actctgagtttttaactctgagtttttaactctgagtttttaactctgag
tttttaactctgagtttttaactctgagtttttaactctgagtttttaac
tctgagtttttaactctgagtttttaaCTCTGAGNaaggaaaccatttca
tttggacaatttagtcgggtGGAAATGACTAAGttgtaaatttggtcggg
gaaaagtgacgaatttgaaaatttggtcggggaaaagtgacgaaaatgcc
tctaggtgacgaaattttttccCGACTAATTAAAACCCCgcaattttttc
cccgataaagtaTCTAGAATGACGGATTAAATCTGGTATTTTCTTTGTTA
TCGCGCTGTgtgtttttcgaaatctggcgatatgttttattttcaataca
GCGTTTCCTTGAAAACAACGTGGGTCACGGGTTTAGGATGGGAGATAAGT
GGCTTCATCCAGGAGTTTCgtgtctagcccttcgggcttggttgattttt
atcgattttGATCTTAACTGGCGTGTCACTTGGCATATATTTTTGATACT
CCAGATATCATTAAATACAGTTAATGAGGAGTGTCTCAGTAATGAACCTT
ACTTTTTTGTTCGATAAGGTATGAATAGATTAAGCTTTACAGATAGAACA
TGTCAAGACAAAGTTTTCCGGAGTCTATAGTAGTAGGAAACCAACGTAGT
AGGATACCAACGTTCAATGTTTTGTGAATGTACTGTACTCAAGCCTACAT
TGAGTCAAGATTTTTTCTGGGTACTAATTTTATTAAGTATTCAAATTTCC
ATGATTATATGTAAACCTATAATCAATGGTCTTTAGAAAATATCTTAAAT
GTTGCTTCGTTTACCGATCTTCTATTTGATTTTAGGTCGTTTCCTACTAC
AACAATGTGTACAAGGAGAAAATGCTGCAAAAAGAAAAGGAGCTCAAACG
AGAGCAAAGTGAGTCTTTGTCTTCAATTTCTTATCGAGCTGGCTTGTGTC
ATTTTCTCCGTCTTCGTAAAAAAATCCTGCCTCAAAACCTTCATTTGTTA
AAGATTTGTTTAGTTATGATAAAGAAAAAGCACCTGCCTCTTATGCCGAG
AAAGCAAAATTAACAATATAGAATTTCTCAAATTTGTGCCACATTTCTCT
TTAGATAGATTAAACAAACTACGTAAAGAAGAAGAGCAGATGAAGCTGaa
gagaaaagaagaaaagaaacaaaGGCTCGAAGAAGAAAAGAGGAAGAAAG
CGACCACTACACAACATCAAGATCAAAGTACGGAAAGCTCAATCTTTTCA
ACGTTTAATTGTAACACCTCCACTTTTACATGACGTTTTAGTCTACACCA
GTTGTGGACTGTGATAAACTGAAATTTAATTACAGTACTGCATATTTAAT
TACACTTAGCGCTTCCTATTTTGACGTTCGTCAATTTAATAAGCTCCCCT
TTATTGGACTgccaaatattcaaaaaattgtgttaacccttcgagcatct
tgcTAATTTTTTACTAGGAGGTGggattgacaagtgctatgaTCTTGAAG
TTTTGACAGACCGGTccgttttttacctaaaatggTCACTTTCAGTCTAT
AACACTAAACTATAACTAAATTTTGCTTGTAAGCTTGTCTTATCAACACC
TAAtacttgtcaaaatttcaagtcagtAACAGTTTCTGATCCCTAGATAC
CCACGAATGATTTTGGTAAAAAGGGTAATTTTTGGCCGGTCTCTAAAATA
CACGATTCTAGCAAATGGCAAAGAATTTATTCTATGCTCCAAAAAATGTT
ACGTGGAGCTGCctcacaaaatttgagcaaaaatgtTATATGTTCACTCT
ATAACTcggactatttttctggttCCTTCAATGTTTTCAtgtgtttcttt
ttcttttcagaacaAACTACATCAAAAGATTCTTCAAGTGTAAAAGGTAA
TAGCCTTTTTCATGAATTGCTCACAAACGAAGTTGAAAGAAGTTATCTAA
AACTTAATCCAATTTGGCCAATTTAATCGGGATTTAATCcagatttaagc
ctaattttTTTCGAACAACCGATGGTTCTGCGTTAATCGGCGCTAATCGA
GATTTAATCGAGAATTAAGCTAATCGGCCactaatccacttttgaacaac
cgggcccagATGACTAGCTCAGGTTCGAAAACGCTCTATTGTTTCACTAA
AACCTTTGCACATGGAATgtaaactgaaaaattggattttcaaaTCTAGG
AAAGTGTGCTTTCTCGAAGAATAGGAGTTTTACACAAATAACGaaagaag
atatgacgtaggctattctttgtccattttttgaagtttttaaattcaat
tgttCATCTTTTCGTATTTCAGAGACAATAGATTCCAACGGCTCATGTGG
TAGTTGGTTCTACCTCGTCATATTTCTCATATTGATTGCTACCGGTATCG
CTTTTGTTCTTCTCCATAAAGATGCTGTTCAAATtaggatatttttttct
gagTTGTACAAAGGTTTTTCTAGAAAAAGATTTGAAGAATTATAATGTAA
AAGCTTTAGCTTTTATTTCATGCTTTCGCCTGTCAAAAGAAATGTTTAGt
ctcatttttggaattttttaatggaaaaGTGATAAAAATGTTACCAAAAA
ATGCTTTATAAAAGAAGGACGAAGGGTG

Coding sequence (CDS) from alignment at scaffold_398:46329..61656+

>TCONS_00063679 ID=TCONS_00063679|Name=TCONS_00063679|organism=Clytia hemisphaerica|type=CDS|length=5838bp|location=Sequence derived from alignment at scaffold_398:46329..61656+ (Clytia hemisphaerica)
ATGGCGGATGAAAAATGGTCCacacaaaaaattaaatcaagaATTGAAGA
AAACGAACTAGATCTCAGTCTCTGTGGGATCTCCAAAGTACCCGTACTga
atttgcttCCGTTCACTAAAGTTACAGTTTTGGATCTATCATGCAATAAG
ATAAACTCAATACCTgatTCATTTAGCCGACTTGACCATCTTGTTCAAAT
CGATTTGAGTAAAAATGCCCTTACCGAGCTTCCTAGTAATTTTGGAAATC
TAGGGAAGTTGAAAAGATTAGATTTGTTTCAAAATCATCTCGAAGAATTA
CCAATAAGCTTCCACAAGCTAAAAAGCTTGAGTTGGTTAGATCTCAAGGC
GAATCCCATTCAAGAGCGATTGCAAACAATTGTTGGAGACTGCCTAAAAC
CTATCGAATGTCAAAGTTGTGCAAGAAATGTCGTTTCCTACTACAACAAT
GTGTACAAGGAGAAAATGCTGCAAAAAGAAAAGGAGCTCAAACGAGAGCA
AAATAGATTAAACAAACTACGTAAAGAAGAAGAGCAGATGAAGCTGaaga
gaaaagaagaaaagaaacaaaGGCTCGAAGAAGAAAAGAGGAAGAAAGCG
ACCACTACACAACATCAAGATCAAAaacaAACTACATCAAAAGATTCTTC
AAGTGTAAAAGAGACAATAGATTCCAACGGCTCATGTGGTAGTTGGTTCT
ACCTCGTCATATTTCTCATATTGATTGCTACCGGTATCGCTTTTGTTCTT
CTCCATAAAGATGCTGTTCAAATtaggatatttttttctgagTTGTACAA
AGGTTTTTCTAGAAAAAGATTTGAAGAATTATAAATGGCGGATGAAAAAT
GGTCCacacaaaaaattaaatcaagaATTGAAGAAAACGAACTAGATCTC
AGTCTCTGTGGGATCTCCAAAGTACCCGTACTgaatttgcttCCGTTCAC
TAAAGTTACAGTTTTGGATCTATCATGCAATAAGATAAACTCAATACCTg
atTCATTTAGCCGACTTGACCATCTTGTTCAAATCGATTTGAGTAAAAAT
GCCCTTACCGAGCTTCCTAGTAATTTTGGAAATCTAGGGAAGTTGAAAAG
ATTAGATTTGTTTCAAAATCATCTCGAAGAATTACCAATAAGCTTCCACA
AGCTAAAAAGCTTGAGTTGGTTAGATCTCAAGGCGAATCCCATTCAAGAG
CGATTGCAAACAATTGTTGGAGACTGCCTAAAACCTATCGAATGTCAAAG
TTGTGCAAGAAATGTCGTTTCCTACTACAACAATGTGTACAAGGAGAAAA
TGCTGCAAAAAGAAAAGGAGCTCAAACGAGAGCAAAATAGATTAAACAAA
CTACGTAAAGAAGAAGAGCAGATGAAGCTGaagagaaaagaagaaaagaa
acaaaGGCTCGAAGAAGAAAAGAGGAAGAAAGCGACCACTACACAACATC
AAGATCAAAaacaAACTACATCAAAAGATTCTTCAAGTGTAAAAGAGACA
ATAGATTCCAACGGCTCATGTGGTAGTTGGTTCTACCTCGTCATATTTCT
CATATTGATTGCTACCGGTATCGCTTTTGTTCTTCTCCATAAAGATGCTG
TTCAAATtaggatatttttttctgagTTGTACAAAGGTTTTTCTAGAAAA
AGATTTGAAGAATTATAAATGGCGGATGAAAAATGGTCCacacaaaaaat
taaatcaagaATTGAAGAAAACGAACTAGATCTCAGTCTCTGTGGGATCT
CCAAAGTACCCGTACTgaatttgcttCCGTTCACTAAAGTTACAGTTTTG
GATCTATCATGCAATAAGATAAACTCAATACCTgatTCATTTAGCCGACT
TGACCATCTTGTTCAAATCGATTTGAGTAAAAATGCCCTTACCGAGCTTC
CTAGTAATTTTGGAAATCTAGGGAAGTTGAAAAGATTAGATTTGTTTCAA
AATCATCTCGAAGAATTACCAATAAGCTTCCACAAGCTAAAAAGCTTGAG
TTGGTTAGATCTCAAGGCGAATCCCATTCAAGAGCGATTGCAAACAATTG
TTGGAGACTGCCTAAAACCTATCGAATGTCAAAGTTGTGCAAGAAATGTC
GTTTCCTACTACAACAATGTGTACAAGGAGAAAATGCTGCAAAAAGAAAA
GGAGCTCAAACGAGAGCAAAATAGATTAAACAAACTACGTAAAGAAGAAG
AGCAGATGAAGCTGaagagaaaagaagaaaagaaacaaaGGCTCGAAGAA
GAAAAGAGGAAGAAAGCGACCACTACACAACATCAAGATCAAAaacaAAC
TACATCAAAAGATTCTTCAAGTGTAAAAGAGACAATAGATTCCAACGGCT
CATGTGGTAGTTGGTTCTACCTCGTCATATTTCTCATATTGATTGCTACC
GGTATCGCTTTTGTTCTTCTCCATAAAGATGCTGTTCAAATtaggatatt
tttttctgagTTGTACAAAGGTTTTTCTAGAAAAAGATTTGAAGAATTAT
AAATGGCGGATGAAAAATGGTCCacacaaaaaattaaatcaagaATTGAA
GAAAACGAACTAGATCTCAGTCTCTGTGGGATCTCCAAAGTACCCGTACT
gaatttgcttCCGTTCACTAAAGTTACAGTTTTGGATCTATCATGCAATA
AGATAAACTCAATACCTgatTCATTTAGCCGACTTGACCATCTTGTTCAA
ATCGATTTGAGTAAAAATGCCCTTACCGAGCTTCCTAGTAATTTTGGAAA
TCTAGGGAAGTTGAAAAGATTAGATTTGTTTCAAAATCATCTCGAAGAAT
TACCAATAAGCTTCCACAAGCTAAAAAGCTTGAGTTGGTTAGATCTCAAG
GCGAATCCCATTCAAGAGCGATTGCAAACAATTGTTGGAGACTGCCTAAA
ACCTATCGAATGTCAAAGTTGTGCAAGAAATGTCGTTTCCTACTACAACA
ATGTGTACAAGGAGAAAATGCTGCAAAAAGAAAAGGAGCTCAAACGAGAG
CAAAATAGATTAAACAAACTACGTAAAGAAGAAGAGCAGATGAAGCTGaa
gagaaaagaagaaaagaaacaaaGGCTCGAAGAAGAAAAGAGGAAGAAAG
CGACCACTACACAACATCAAGATCAAAaacaAACTACATCAAAAGATTCT
TCAAGTGTAAAAGAGACAATAGATTCCAACGGCTCATGTGGTAGTTGGTT
CTACCTCGTCATATTTCTCATATTGATTGCTACCGGTATCGCTTTTGTTC
TTCTCCATAAAGATGCTGTTCAAATtaggatatttttttctgagTTGTAC
AAAGGTTTTTCTAGAAAAAGATTTGAAGAATTATAAATGGCGGATGAAAA
ATGGTCCacacaaaaaattaaatcaagaATTGAAGAAAACGAACTAGATC
TCAGTCTCTGTGGGATCTCCAAAGTACCCGTACTgaatttgcttCCGTTC
ACTAAAGTTACAGTTTTGGATCTATCATGCAATAAGATAAACTCAATACC
TgatTCATTTAGCCGACTTGACCATCTTGTTCAAATCGATTTGAGTAAAA
ATGCCCTTACCGAGCTTCCTAGTAATTTTGGAAATCTAGGGAAGTTGAAA
AGATTAGATTTGTTTCAAAATCATCTCGAAGAATTACCAATAAGCTTCCA
CAAGCTAAAAAGCTTGAGTTGGTTAGATCTCAAGGCGAATCCCATTCAAG
AGCGATTGCAAACAATTGTTGGAGACTGCCTAAAACCTATCGAATGTCAA
AGTTGTGCAAGAAATGTCGTTTCCTACTACAACAATGTGTACAAGGAGAA
AATGCTGCAAAAAGAAAAGGAGCTCAAACGAGAGCAAAATAGATTAAACA
AACTACGTAAAGAAGAAGAGCAGATGAAGCTGaagagaaaagaagaaaag
aaacaaaGGCTCGAAGAAGAAAAGAGGAAGAAAGCGACCACTACACAACA
TCAAGATCAAAaacaAACTACATCAAAAGATTCTTCAAGTGTAAAAGAGA
CAATAGATTCCAACGGCTCATGTGGTAGTTGGTTCTACCTCGTCATATTT
CTCATATTGATTGCTACCGGTATCGCTTTTGTTCTTCTCCATAAAGATGC
TGTTCAAATtaggatatttttttctgagTTGTACAAAGGTTTTTCTAGAA
AAAGATTTGAAGAATTATAAATGGCGGATGAAAAATGGTCCacacaaaaa
attaaatcaagaATTGAAGAAAACGAACTAGATCTCAGTCTCTGTGGGAT
CTCCAAAGTACCCGTACTgaatttgcttCCGTTCACTAAAGTTACAGTTT
TGGATCTATCATGCAATAAGATAAACTCAATACCTgatTCATTTAGCCGA
CTTGACCATCTTGTTCAAATCGATTTGAGTAAAAATGCCCTTACCGAGCT
TCCTAGTAATTTTGGAAATCTAGGGAAGTTGAAAAGATTAGATTTGTTTC
AAAATCATCTCGAAGAATTACCAATAAGCTTCCACAAGCTAAAAAGCTTG
AGTTGGTTAGATCTCAAGGCGAATCCCATTCAAGAGCGATTGCAAACAAT
TGTTGGAGACTGCCTAAAACCTATCGAATGTCAAAGTTGTGCAAGAAATG
TCGTTTCCTACTACAACAATGTGTACAAGGAGAAAATGCTGCAAAAAGAA
AAGGAGCTCAAACGAGAGCAAAATAGATTAAACAAACTACGTAAAGAAGA
AGAGCAGATGAAGCTGaagagaaaagaagaaaagaaacaaaGGCTCGAAG
AAGAAAAGAGGAAGAAAGCGACCACTACACAACATCAAGATCAAAaacaA
ACTACATCAAAAGATTCTTCAAGTGTAAAAGAGACAATAGATTCCAACGG
CTCATGTGGTAGTTGGTTCTACCTCGTCATATTTCTCATATTGATTGCTA
CCGGTATCGCTTTTGTTCTTCTCCATAAAGATGCTGTTCAAATtaggata
tttttttctgagTTGTACAAAGGTTTTTCTAGAAAAAGATTTGAAGAATT
ATAAATGGCGGATGAAAAATGGTCCacacaaaaaattaaatcaagaATTG
AAGAAAACGAACTAGATCTCAGTCTCTGTGGGATCTCCAAAGTACCCGTA
CTgaatttgcttCCGTTCACTAAAGTTACAGTTTTGGATCTATCATGCAA
TAAGATAAACTCAATACCTgatTCATTTAGCCGACTTGACCATCTTGTTC
AAATCGATTTGAGTAAAAATGCCCTTACCGAGCTTCCTAGTAATTTTGGA
AATCTAGGGAAGTTGAAAAGATTAGATTTGTTTCAAAATCATCTCGAAGA
ATTACCAATAAGCTTCCACAAGCTAAAAAGCTTGAGTTGGTTAGATCTCA
AGGCGAATCCCATTCAAGAGCGATTGCAAACAATTGTTGGAGACTGCCTA
AAACCTATCGAATGTCAAAGTTGTGCAAGAAATGTCGTTTCCTACTACAA
CAATGTGTACAAGGAGAAAATGCTGCAAAAAGAAAAGGAGCTCAAACGAG
AGCAAAATAGATTAAACAAACTACGTAAAGAAGAAGAGCAGATGAAGCTG
aagagaaaagaagaaaagaaacaaaGGCTCGAAGAAGAAAAGAGGAAGAA
AGCGACCACTACACAACATCAAGATCAAAaacaAACTACATCAAAAGATT
CTTCAAGTGTAAAAGAGACAATAGATTCCAACGGCTCATGTGGTAGTTGG
TTCTACCTCGTCATATTTCTCATATTGATTGCTACCGGTATCGCTTTTGT
TCTTCTCCATAAAGATGCTGTTCAAATtaggatatttttttctgagTTGT
ACAAAGGTTTTTCTAGAAAAAGATTTGAAGAATTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039920XLOC_039920Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063679-proteinTCONS_00063679-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063679-exon-scaffold_398-1491911889:46329..47585TCONS_00063679-exon-scaffold_398-1491911889:46329..47585Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:46329..47585TCONS_00063679-exon-scaffold_398-1510915933:46329..47585Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:46329..47585TCONS_00063679-exon-scaffold_398-1575043694:46329..47585Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1491911889:55014..55073TCONS_00063679-exon-scaffold_398-1491911889:55014..55073Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:55014..55073TCONS_00063679-exon-scaffold_398-1510915933:55014..55073Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:55014..55073TCONS_00063679-exon-scaffold_398-1575043694:55014..55073Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1491911889:55328..55591TCONS_00063679-exon-scaffold_398-1491911889:55328..55591Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:55328..55591TCONS_00063679-exon-scaffold_398-1510915933:55328..55591Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:55328..55591TCONS_00063679-exon-scaffold_398-1575043694:55328..55591Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1491911889:59864..59936TCONS_00063679-exon-scaffold_398-1491911889:59864..59936Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:59864..59936TCONS_00063679-exon-scaffold_398-1510915933:59864..59936Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:59864..59936TCONS_00063679-exon-scaffold_398-1575043694:59864..59936Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1491911889:60133..60255TCONS_00063679-exon-scaffold_398-1491911889:60133..60255Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:60133..60255TCONS_00063679-exon-scaffold_398-1510915933:60133..60255Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:60133..60255TCONS_00063679-exon-scaffold_398-1575043694:60133..60255Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1491911889:60889..60924TCONS_00063679-exon-scaffold_398-1491911889:60889..60924Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:60889..60924TCONS_00063679-exon-scaffold_398-1510915933:60889..60924Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:60889..60924TCONS_00063679-exon-scaffold_398-1575043694:60889..60924Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1491911889:61351..61656TCONS_00063679-exon-scaffold_398-1491911889:61351..61656Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1510915933:61351..61656TCONS_00063679-exon-scaffold_398-1510915933:61351..61656Clytia hemisphaericaexon
TCONS_00063679-exon-scaffold_398-1575043694:61351..61656TCONS_00063679-exon-scaffold_398-1575043694:61351..61656Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_398supercontigscaffold_398:46329..61656 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.0471	37.2681	17.4888	14.7565	81.7249	64.2177	86.1389	89.2878	61.9308	58.3642	55.6263	44.8435	26.426	24.867	42.3464	46.8323	42.7193	45.7668	18.6994	20.9651	38.1765	33.6653	53.0141	50.1363	44.4899	47.2028	38.5694	31.5829	68.9177	61.0052
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00063679 vs. Swiss-Prot (Human)
Match: LRC59 (Leucine-rich repeat-containing protein 59 OS=Homo sapiens GN=LRRC59 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.420e-36
Identity = 67/142 (47.18%), Postives = 94/142 (66.20%), Query Frame = 1 
Query: 1183 IKSRIEENELDLSLCGISKVPVLNLLPFTKVTVLDLSCNKINSIPDSFSRLDHLVQIDLSKNALTELPSNFGNLGKLKRLDLFQNHLEELPISFHKLKSLSWLDLKANPIQERLQTIVGDCLKPIECQSCARNVVSYYNNVY 1608
            ++ +++ NELDLSL  +++VPV  L    K T+LDLSCNK+ ++P  F  L HLV++DLSKN L +LP++FG L  L+ LDL  N L  LP+SF +LK+L WLDLK NP+   L  + GDCL   +C+ CA  V+ +   V 
Sbjct:   11 LRDKLDGNELDLSLSDLNEVPVKELAALPKATILDLSCNKLTTLPSDFCGLTHLVKLDLSKNKLQQLPADFGRLVNLQHLDLLNNKLVTLPVSFAQLKNLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQ 152
The following BLAST results are available for this feature:
BLAST of TCONS_00063679 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRC598.420e-3647.18Leucine-rich repeat-containing protein 59 OS=Homo ... [more]
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