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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063626 ID=TCONS_00063626|Name=TCONS_00063626|organism=Clytia hemisphaerica|type=transcript|length=1318bp
GTCGAAagttctggcaaaacaacttttGGGTCAGGTCTCGTTTCGAAAAA
GTAGTACCATCCATGCCTGGTAAAAACGTGTTTACGGCACCCTCTTTTTG
TTGTAAAAGAAAAACTGTCACAATTTGGAACTGGGCAATAAAAAAGTCCA
TCCAAATCTTCTTTGAGGTGTAGCCTTTTTGCTTTCGAACTGGCCCCGAC
GGCATTCTTCCAtatctttttagaaaataattttcctggCATTAATTGTC
CACTTACTTTGCTATATGCGATTGTCCTTCTCTGTCATCCTGGACATGTC
AAGTTTTTTCTACTTTCTTGCACATTTTTTGTACGTCCTGTGTGATCCTT
TTTGTTACTAGGCATTTTATAGTGAAAAGTTGACCGAAAAAAGGCGAAAT
TGCACGAAAATATGGtaatttttgcgaagcgaatatacatgagcgaagca
gttttgctatagtgtgcatgtagctttaaattctatatacccaGGGGAGC
GCAAGACGAAAACGAAAATTTGGTTCCTATCTGTTAAATGTGGGTTAAGT
ATTCAGATCCCGGTTGTTTTCGTCCAGGTAAGAGGCGTTACAATATCGGA
CTGGTAGATTGTATTTAGGATGGCTTCGTCGAGAAAAAGAACCACTCTAC
GGCTCCGAAAATCTCCGAGTCAGGGCAACTTCCATAAAAGATATTCCGTC
GTTCCCGTACATTATTAACTTCTTTACTCCCGCTCCATATCAGAAAGCTG
ATTGGTTCGGAAAACCAGAGCGCGGTCGAAGCGTTCAAATATCAGAAAGC
TGATTGGTTCGGAAAACCAGCGCGCGGTCGAAGCgttcaaaaaactcaaa
ctcTCTCTCTGCTCTCATGGTGCTCCCTTTTAAGAAGTCCCTGCATTGAC
TCGATTGAAAACACAGACACTTTCGAACCTTCGAATCTTTccaatttcga
atgtttacttttttgtgagaaataaaaatgaaacgttgaatattttgaaa
aagttgaagaggTGTAAGATGTTGGTTGAAAAGAAAAAGCTGAAACTGTA
GCAAAGAGAAAGAccagaagaaagaagatggaaatttTTACTGTTTCGTC
TGGTTTCATTGACAAGACAGGCTCAACAGAGTTGTTGTGTCATTTTCTTG
AAAaggaaagctgaaaaatgaccTGCATACGTggtgaaaaaacctttttt
gcaaAGCGAATATAACTATAAGAGAGTGAGCAAGAACATGAACTTGGCCT
TTTTGCATGCTTTGAAATGGAGACGAACATATTCAAGTTATGGATAATCT
GGAAGAATTTATCCCTCC Run BLAST on NCBI transcript from alignment at scaffold_396:112428..113745 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063626 ID=TCONS_00063626|Name=TCONS_00063626|organism=Clytia hemisphaerica|type=transcript|length=1318bp|location=Sequence derived from alignment at scaffold_396:112428..113745 (Clytia hemisphaerica)
GGAGGGATAAATTCTTCCAGATTATCCATAACTTGAATATGTTCGTCTCC
ATTTCAAAGCATGCAAAAAGGCCAAGTTCATGTTCTTGCTCACTCTCTTA
TAGTTATATTCGCTttgcaaaaaaggttttttcaccACGTATGCAggtca
tttttcagctttcctTTTCAAGAAAATGACACAACAACTCTGTTGAGCCT
GTCTTGTCAATGAAACCAGACGAAACAGTAAaaatttccatcttctttct
tctggTCTTTCTCTTTGCTACAGTTTCAGCTTTTTCTTTTCAACCAACAT
CTTACAcctcttcaactttttcaaaatattcaacgtttcatttttatttc
tcacaaaaaagtaaacattcgaaattggAAAGATTCGAAGGTTCGAAAGT
GTCTGTGTTTTCAATCGAGTCAATGCAGGGACTTCTTAAAAGGGAGCACC
ATGAGAGCAGAGAGAgagtttgagttttttgaacGCTTCGACCGCGCGCT
GGTTTTCCGAACCAATCAGCTTTCTGATATTTGAACGCTTCGACCGCGCT
CTGGTTTTCCGAACCAATCAGCTTTCTGATATGGAGCGGGAGTAAAGAAG
TTAATAATGTACGGGAACGACGGAATATCTTTTATGGAAGTTGCCCTGAC
TCGGAGATTTTCGGAGCCGTAGAGTGGTTCTTTTTCTCGACGAAGCCATC
CTAAATACAATCTACCAGTCCGATATTGTAACGCCTCTTACCTGGACGAA
AACAACCGGGATCTGAATACTTAACCCACATTTAACAGATAGGAACCAAA
TTTTCGTTTTCGTCTTGCGCTCCCCtgggtatatagaatttaaagctaca
tgcacactatagcaaaactgcttcgctcatgtatattcgcttcgcaaaaa
ttaCCATATTTTCGTGCAATTTCGCCTTTTTTCGGTCAACTTTTCACTAT
AAAATGCCTAGTAACAAAAAGGATCACACAGGACGTACAAAAAATGTGCA
AGAAAGTAGAAAAAACTTGACATGTCCAGGATGACAGAGAAGGACAATCG
CATATAGCAAAGTAAGTGGACAATTAATGccaggaaaattattttctaaa
aagataTGGAAGAATGCCGTCGGGGCCAGTTCGAAAGCAAAAAGGCTACA
CCTCAAAGAAGATTTGGATGGACTTTTTTATTGCCCAGTTCCAAATTGTG
ACAGTTTTTCTTTTACAACAAAAAGAGGGTGCCGTAAACACGTTTTTACC
AGGCATGGATGGTACTACTTTTTCGAAACGAGACCTGACCCaaaagttgt
tttgccagaactTTCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063626-exon-scaffold_396-1491911889:112428..113745 | TCONS_00063626-exon-scaffold_396-1491911889:112428..113745 | Clytia hemisphaerica | exon |
| TCONS_00063626-exon-scaffold_396-1510915933:112428..113745 | TCONS_00063626-exon-scaffold_396-1510915933:112428..113745 | Clytia hemisphaerica | exon |
| TCONS_00063626-exon-scaffold_396-1575043694:112428..113745 | TCONS_00063626-exon-scaffold_396-1575043694:112428..113745 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_396 | supercontig | scaffold_396:112428..113745 . |
Blast
The following BLAST results are available for this feature:
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