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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062394 ID=TCONS_00062394|Name=TCONS_00062394|organism=Clytia hemisphaerica|type=transcript|length=489bp
TTACAAACCAATTCAATATGCTGAAGCTTTTGGTGACGCTTTCATTGGTG
ACATGCCTATGGGCATCCTGTTACGACAAAGACGGGGAAAGAAATTGTAA
AAGCTGGAAAGACACCAGTAACTTTTGCAATCGACCAGATGCTGATCAAT
ATTGCGCAATTGCGCAAAGACTTGTGGGAAATGTAATGGCGGCGGTGGTG
GTGGTAGCGGCAATGGTGGTTCCTGTGGCCGTTCGTTTGCACCCCAAGGG
CGGGTGGTGAATGGAAAAGATGCAGTGCCAGGTGCTTATCCATGGATGGC
TTCAATCATGATGTACGGCAAACACTTCTGCGGAGCCACCTTGGTTGCGC
CCAACTGGGCAGTTACAGCAGCTCACTGTGTTGATTTTATAAAACCCCAT
CAAGTGCCTTACTGGTTGATAAAGCTCGGTGCACACGATCACCGTCAAGT
GGAAGCCTCCACACAAACATATAACCTCAAAAGAATTAT Run BLAST on NCBI transcript from alignment at scaffold_364:322896..323997+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062394 ID=TCONS_00062394|Name=TCONS_00062394|organism=Clytia hemisphaerica|type=transcript|length=1102bp|location=Sequence derived from alignment at scaffold_364:322896..323997+ (Clytia hemisphaerica)
TTACAAACCAATTCAATATGCTGAAGCTTTTGGTGACGCTTTCATTGGTG
ACATGCCTATGTAGGTAGACTTCCAAAATTTATTCATTTCACTTGTATCT
TGTATGAAAGCCGAAAGTTGATTCTATATTCCGACATTTAAAACGTTAGA
TTTAATATGATCCATAAAGGCTTTAGAGAAGCATGCAGCGTCTTAGTAGC
AAATTATTTAAAAGTGAATCTTCTGCCATTAAAAATTGCCATGTCAGTct
tttgactgttttttttggGAATCTTTAGCCTGCGGtttcaaaattctttc
tttGTACTATATTTATGCTCATCTCTTATGTAAAAAATGCTTCTTACATG
ACATTAGTACGAATCCCAATTCCTTCACTTTGAATTTACAGGGGCATCCT
GTTACGACAAAGACGGGGAAAGAAATTGTAAAAGCTGGAAAGACACCAGT
AACTTTTGCAATCGACCAGATGCTGATCAATATTGCGCAATTGCGCAAAG
ACTTGTGGGAAATGTAATGGCGGCGGTGGTGGTGGTAGCGGCAATGGTGG
TTCCTGTGGCCGTTCGTTTGCACCCCAAGGGCGGGTGGTGAATGGAAAAG
ATGCAGTGCCAGGTGCTTATCCATGGATGGCTTCAATCATGATGTACGGC
AAACACTTCTGCGGAGCCACCTTGGTTGCGCCCAACTGGGTATGCATTCC
ATTAAGCTCATAAAAAGACACCGTATTAAATGCCATCATCATGTGTTGTA
GTGGTGACCACGGCATTGACTCCAAACTTTCATATCCCTTCCTCTCCTGA
AAGTCTCAGAGCCTTTCGAGCTGATAACATCATTCCATTATTCTATAATA
TCATACAATCCGACCGAACTGATTTGTAATACCTTGAAAATAATACAAAT
AAGCTGCTTTTTGTTGTCTTGTGAAAAGTCCAATGCcttttttaatcatt
tcaaTACCTTTGAAATTTCAGGCAGTTACAGCAGCTCACTGTGTTGATTT
TATAAAACCCCATCAAGTGCCTTACTGGTTGATAAAGCTCGGTGCACACG
ATCACCGTCAAGTGGAAGCCTCCACACAAACATATAACCTCAAAAGAATT
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062394-exon-scaffold_364-1491911889:322896..322955 | TCONS_00062394-exon-scaffold_364-1491911889:322896..322955 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1510915933:322896..322955 | TCONS_00062394-exon-scaffold_364-1510915933:322896..322955 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1575043694:322896..322955 | TCONS_00062394-exon-scaffold_364-1575043694:322896..322955 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1491911889:323287..323584 | TCONS_00062394-exon-scaffold_364-1491911889:323287..323584 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1510915933:323287..323584 | TCONS_00062394-exon-scaffold_364-1510915933:323287..323584 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1575043694:323287..323584 | TCONS_00062394-exon-scaffold_364-1575043694:323287..323584 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1491911889:323867..323997 | TCONS_00062394-exon-scaffold_364-1491911889:323867..323997 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1510915933:323867..323997 | TCONS_00062394-exon-scaffold_364-1510915933:323867..323997 | Clytia hemisphaerica | exon |
| TCONS_00062394-exon-scaffold_364-1575043694:323867..323997 | TCONS_00062394-exon-scaffold_364-1575043694:323867..323997 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_364 | supercontig | scaffold_364:322896..323997 + |
Blast
The following BLAST results are available for this feature:
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