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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061990 ID=TCONS_00061990|Name=TCONS_00061990|organism=Clytia hemisphaerica|type=transcript|length=1444bp
ATATAACTTAGCCTAGATATCCAGACTGTAAacctttattttgatatttc
tggATCATTCTTGGCGACCTTGCAATCCACCAAGTAAAATAGAAGCACGT
GAACATGCATCATTCACACAATATTGATGGAAGCACATGAGTTCCAGACT
TGAGGTGATTGCTCGGCATCCCATCTGAAAGAAAGAACGTATTCACCGGC
TGGTAAATCACTTGGTATATGCACCAAATCAACAATGGAGAATGGGAAAT
GTTGAAGATGGAAATATCTTCGAACTCCGTAACCGTAGAGATCTGTTTTT
TGTGGCTTAAATTGTGTGCCGTGTGGACAGCCGGTAGTGTTGGATAAAAA
GCCACCGTAATCTCCAATGCATCCTGGGATTGGGTTCTTGGTCCATTGTG
AGCCTTCTGGGTAGGTTCCTTTGGTGACACGTGTAGCTTCAATTTCCACC
CTGCTTGTTTTATCCTCACCATATTGAATCCATTGTTTGTCGCCGATAAA
CTCCAAAGGAATCTGTTGAAAACATTCTTCGGTCAATTTGGAATAACCTT
CTTCGGGGAGTTTGCATAATCTATATGAGTAACCGCCACCGTGGTTGGCA
AAGATTCCCCAAATGACTTCCACAACTGTATCACGGACCCATTCAGTGAC
AACAAAGTCGTACGGCATATTAACGTCTACAAGTTTAGGGCCAAATCCGA
ACCCACCTcgattttgtgagcattttccACCAATACACCCATTGATGTTA
CCGCCTGCAACACCACAAGGACTATCAATAGGGGCAGTGCCTGGTGCTCT
CCAAGGATGAGTTAAAATTTCATCTTGGTTTGGAGCATGCGGATATGTGC
GGAGTTCAGGATCAAAAATGGTCGGTTCCGTAATTCTGGTATTGTTCTTG
TACCAAAAGCAAGTGAGCCCTGGTGATTTAAAATCTTCGCAAGTATATTT
TCCATTGCAAATCACATTTTTTGGGATATTTTCACCGGCTAAACATTGTT
TACGTGATTTAGTACCAACATAATCGAAAACCCAAGATCCATCTTGCATT
TGAATCCATTGTTTGAATTCTAACCATGACAACGGTTCCAACATAGCAGC
ATGGCTGTCTACATGCTGGACGTAAAGGCAACCGAGGATAACCAAAAACT
GGACAATCAACAAACGCATCTTGTTTGCGAGAAAGATAACATCAAAGTAG
CAACAACCCAAGATGAAAAATCGTATAAAGTAAAGTAAAGTGGAATTTGA
CCCTCTGTCAAGACATGAAAAGAATGGATTCAAAACTAGACTTTATTGTT
TTTATAGGCATAATTTTCGCCAGCTCAAGTTCCTCTGATTCTGATACACT
GACTGTAAcgtaatacacgctttttcttttataagaataacttctataag
aatatcagggtgagatttcgggtttaaaacaataggcctattgt Run BLAST on NCBI transcript from alignment at scaffold_361:435630..438063- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061990 ID=TCONS_00061990|Name=TCONS_00061990|organism=Clytia hemisphaerica|type=transcript|length=2434bp|location=Sequence derived from alignment at scaffold_361:435630..438063- (Clytia hemisphaerica)
ATATAACTTAGCCTAGATATCCAGACTGTAAACCTTTATTTTGATATTTC
TGGATCATTCTTGGCGACCTTGCAATCCACCAAGTAAAATAGAAGCACGT
GCGTACTTTGTCTATTTAATGATTGCTCTCTGTCATGGAATAAGCCTACT
CCAACACATTAAACCTGTATATAGTAAGCAAGACTGTTAACCAGAAAAAT
CAAAAGAAAAATTTAGCTTTTTTGAGACATCTTGCTTGAAGCAACTGCAC
TCTTCGTTTATTTTCAGTTAATAGTATATGCAAAATCCATGATTAATCAA
GCTTTTTGTTCATATTCTTTTGCAAGATTATCTTATTAATTATACACTTT
GAACAAATGACGTCAACTTTCGCTAGGGATTTGATGCAGACTTACAAAAT
GCGTGGATAATTACCTTGGCAACAAATCTTATTAACATTAAACGTAGTTT
TTCACTTAAACAGGGATTTAGAATCGCGTGGTTCTGCTACGAGATATAAA
CAAACAGGCAGTATGAAGGTTTCGTGTGTGTCTGGTTGGAAGCTAATACT
ACAACTACACATTAAGTATTTAATCACTTGAACCATTAAAACTCGGGGAG
GGGCTTTAGGGAGAGAGAAGTGAGTAAATTCAGTGTTTTTTAGGCTGGCG
AAAATAAATTATTGCAGTGATTTTAGTGATACCCTTCTACGCAAGGCTGA
TATCATTGATCCAAATAGATTATACAGTAAGTTATCAGAGGCAGCGGTAA
AAAAAAAAAGATTTTGGAGAATTTATATCCAATTTAAACCCTACCTTGTT
GTAAGATGGAAAATTGCAAAAACGAACAGAGGAGCTTTTTTGTCTTTTGG
GTCCCCAAAAAAATCGGCTGCTGGAGGAGAGAGCAGTCGATCCCTCTGCC
TCCCCTACTACTGCGTTACTGAATGGAATGAAAGTGAAGATTCGTACTGT
AAGTTTATGTATTGAAAAAGAAGTCTTGTAATTAAAATGATAATAGACAA
ATGTTACAAAAAATAAAGATATCTAGCTAGATTCTCAAAATTGTATTGAC
TGTTTTAAATTCTAAATTTTCGAAATCTCTCATTGTTCAGGAACATGCAT
CATTCACACAATATTGATGGAAGCACATGAGTTCCAGACTTGAGGTGATT
GCTCGGCATCCCATCTGAAAGAAAGAACGTATTCACCGGCTGGTAAATCA
CTTGGTATATGCACCAAATCAACAATGGAGAATGGGAAATGTTGAAGATG
GAAATATCTTCGAACTCCGTAACCGTAGAGATCTGTTTTTTGTGGCTTAA
ATTGTGTGCCGTGTGGACAGCCGGTAGTGTTGGATAAAAAGCCACCGTAA
TCTCCAATGCATCCTGGGATTGGGTTCTTGGTCCATTGTGAGCCTTCTGG
GTAGGTTCCTTTGGTGACACGTGTAGCTTCAATTTCCACCCTGCTTGTTT
TATCCTCACCATATTGAATCCATTGTTTGTCGCCGATAAACTCCAAAGGA
ATCTGTTGAAAACATTCTTCGGTCAATTTGGAATAACCTTCTTCGGGGAG
TTTGCATAATCTATATGAGTAACCGCCACCGTGGTTGGCAAAGATTCCCC
AAATGACTTCCACAACTGTATCACGGACCCATTCAGTGACAACAAAGTCG
TACGGCATATTAACGTCTACAAGTTTAGGGCCAAATCCGAACCCACCTCG
ATTTTGTGAGCATTTTCCACCAATACACCCATTGATGTTACCGCCTGCAA
CACCACAAGGACTATCAATAGGGGCAGTGCCTGGTGCTCTCCAAGGATGA
GTTAAAATTTCATCTTGGTTTGGAGCATGCGGATATGTGCGGAGTTCAGG
ATCAAAAATGGTCGGTTCCGTAATTCTGGTATTGTTCTTGTACCAAAAGC
AAGTGAGCCCTGGTGATTTAAAATCTTCGCAAGTATATTTTCCATTGCAA
ATCACATTTTTTGGGATATTTTCACCGGCTAAACATTGTTTACGTGATTT
AGTACCAACATAATCGAAAACCCAAGATCCATCTTGCATTTGAATCCATT
GTTTGAATTCTAACCATGACAACGGTTCCAACATAGCAGCATGGCTGTCT
ACATGCTGGACGTAAAGGCAACCGAGGATAACCAAAAACTGGACAATCAA
CAAACGCATCTTGTTTGCGAGAAAGATAACATCAAAGTAGCAACAACCCA
AGATGAAAAATCGTATAAAGTAAAGTAAAGTGGAATTTGACCCTCTGTCA
AGACATGAAAAGAATGGATTCAAAACTAGACTTTATTGTTTTTATAGGCA
TAATTTTCGCCAGCTCAAGTTCCTCTGATTCTGATACACTGACTGTAACG
TAATACACGCTTTTTCTTTTATAAGAATAACTTCTATAAGAATATCAGGG
TGAGATTTCGGGTTTAAAACAATAGGCCTATTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061990-exon-scaffold_361-1575043694:437964..438063 | TCONS_00061990-exon-scaffold_361-1575043694:437964..438063 | Clytia hemisphaerica | exon |
| TCONS_00061990-exon-scaffold_361-1575043694:435630..436973 | TCONS_00061990-exon-scaffold_361-1575043694:435630..436973 | Clytia hemisphaerica | exon |
| TCONS_00061990-exon-scaffold_361-1510915933:437964..438063 | TCONS_00061990-exon-scaffold_361-1510915933:437964..438063 | Clytia hemisphaerica | exon |
| TCONS_00061990-exon-scaffold_361-1510915933:435630..436973 | TCONS_00061990-exon-scaffold_361-1510915933:435630..436973 | Clytia hemisphaerica | exon |
| TCONS_00061990-exon-scaffold_361-1491911889:437964..438063 | TCONS_00061990-exon-scaffold_361-1491911889:437964..438063 | Clytia hemisphaerica | exon |
| TCONS_00061990-exon-scaffold_361-1491911889:435630..436973 | TCONS_00061990-exon-scaffold_361-1491911889:435630..436973 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:435630..438063 - |
Blast
The following BLAST results are available for this feature:
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