TCONS_00061848 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061848
Unique NameTCONS_00061848
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061848 ID=TCONS_00061848|Name=TCONS_00061848|organism=Clytia hemisphaerica|type=transcript|length=1791bp
CGAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGATTTGATTATAA
ACGTTACTTTCGACCCATTCAGTGCCCTTGATAAAAAAGTCGACCATTCA
TTTAACGAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCT
CATCTCATTATCACTTTCTGAAGCTGttggagaaagaaaaaatgtcACCG
ATTTTTATAACTGTTCCTCGCTACCATCCAAAAATATTGCTGACGTCATG
CTGCTCTTAAAAAACAAATACAAACCGCGAAGAGTTCATTTCCTTTTCGA
TGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCAGAAACACTACGCA
GCCGTTTGGAGAGTAAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAA
AGTGTACAGAAATCTCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTC
ACAGGAGATTGATTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAA
CCACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAA
GGTGAAATCGAAAGCTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAA
AGgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCGAGG
AAACCCAATCAAATGGAGATGACGAAAACAGACCGGGTAGCTCTCAATCA
ACAACAAAAGTTGAATTTCAGGTTAATGAGCAAAAAGAAGATCGAGAAGC
AAGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGAATACGTTTTTA
AGTCGCAGCCACAGACGAGTGAAAACGAAGAAGTCGTAAAAGAACTGTCC
ACTACATATACCTATATGAAAGGGAAATGTGGACATTCTTTCGGGAGCTT
TTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCACACCTTTATTTG
CTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAG
AGAAAGGAGGACGAAGTTGTGGTATTGTGCGAGGATATCTGTCAAGTAAA
AATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATACG
CACCTTACCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAaggaa
aaattcgtcaaaaatttggacaagtTGGAGACAGTTCTGATATCTGATTA
TCGGTCTGTTCGTGGATTGGAAATGACTCATACAATCATCTTTGTGGATC
CAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGCAATCACACGAACC
ATAACAAATCTTGATGTCATTTCAACGAaacctttttcacaaaatgctTC
CACGAGTATCGAACGAGTATCgaaagagcttttcaaaaatatgtcgATGG
GACTTTAGCAATCAAGACTCACGTTGAATCGAGCAAAGACGCGGAAGATC
TTCTGAAAGTACAATTCCAATACAACGAAAAGGACggctcaaaacaaaca
aaaatcatTTCACAGAAATTGACCGATTTCAGTTTCGACGTTTCACAATC
TCTAgatgattttaacaaaaatcaaGAGCTATGGCAAAACTATTTCAGGA
TGGTGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACTAACAAATGG
GATGGCAAAACCATGGAAAGTTTGACCTTGAATGATGGAACTACGCtcag
tttttatgatgtttggaaaattttgctcgaaaagaaattcgcgaaattcg
aagaaattttCCACCAAAAACCGAACATCGTCAACTCGTTG
Run BLAST on NCBI

protein sequence of TCONS_00061848-protein

>TCONS_00061848-protein ID=TCONS_00061848-protein|Name=TCONS_00061848-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
EIARKLLKMSNQDLIINVTFDPFSALDKKVDHSFNELCEQEKLTRKRENL
ISLSLSEAVGERKNVTDFYNCSSLPSKNIADVMLLLKNKYKPRRVHFLFD
EVPQELFTKTYSETLRSRLESKFRESVVVIALQSVQKSRKITEEGKVTNS
QEIDLKSSGMELFKLPTTMRMSSCLHKLKEVLEGEIESSPCSLNLEIRSK
GNVLLTKDESNKAIIEETQSNGDDENRPGSSQSTTKVEFQVNEQKEDREA
SESFDPTKLRDPEYVFKSQPQTSENEEVVKELSTTYTYMKGKCGHSFGSF
LKPRIFYFTKAFTPLFAWFLPILAATLQFCLNERKEDEVVVLCEDICQVK
MVQYALERIHKRPIAYAPYLTGEYPQDIHKMKEKFVKNLDKLETVLISDY
RSVRGLEMTHTIIFVDPENEANAHFLVEAITRTITNLDVISTKPFSQNAS
TSIERVSKELFKNMSMGL
Run BLAST on NCBI

transcript from alignment at scaffold_361:26325..37757+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061848 ID=TCONS_00061848|Name=TCONS_00061848|organism=Clytia hemisphaerica|type=transcript|length=11433bp|location=Sequence derived from alignment at scaffold_361:26325..37757+ (Clytia hemisphaerica)
CGAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGATTTGATTATAA
ACGTTACTTTCGACCCATTCAGTGCCCTTGATAAAAAAGTCGACCATTCA
TTTAACGAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCT
CATCTCATTATCACTTTCTGAAGCTGttggagaaagaaaaaatgtcACCG
ATTTTTATAACTGTTCCTCGCTACCATCCAAAAATATTGCTGACGTCATG
CTGCTCTTAAAAAACAAATACAAACCGCGAAGAGTTCATTTCCTTTTCGA
TGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCAGAAACACTACGCA
GCCGTTTGGAGAGTAAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAA
AGTGTACAGAAATCTCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTC
ACAGGAGATTGATTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAA
CCACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAA
GGTGAAATCGAAAGCTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAA
AGGTATTACATACTATTTACGTAACTTTCTTTTATAATCGCGTTCAATTG
CAACAGTGTGCAAGTAAAATATACTCATTTCCATTTATGAccgaaatatt
ttcttacattttgattttaatttttcaggaaacGTTTTGCTAACAAAAGA
CGAATCTAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGACG
AAAACAGACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTT
AATGAGGTAATTTTGTTAATGAGTGTACTGTTTATAATTAGCTTACNCTA
AAAGTGCACGGcaaacttaaggcttcactttttcttgcgtTAAAAGGTAG
AAGATTCTTCTCTAGCACCTTCGTACGATGATCCAGAAGGCTCCAAACAC
GCACTTCTAGTTTTCAcacacttccagttcttataaaatttgtgtaCTAG
AACTTTCTTAggtcaatggcccagaaggctcaagtgacactgcgcacttc
tgactTGTTATCACAGCGGGAAATTTCCAAGCAAGCGGCCCGCgcaataa
aattttgttttttttggtctttaaaatgaatgtcgagTTACGCAAAGTGA
ATCAAAATTTCCGAGTTGTTCATATCAAGAGTTACAGGTTAAAATTTCCG
ATTTAAGTGCTGGTCAGCAAAATTTTCCCCCAGtggcaaaaatcgggaaa
ttttcgGGCTTAAATCGGGGAAGCAAAAAGtgatagaatatcaactttgt
tttttgcATCCACCTTTTCCACCCCTTCCCTCAAAGTAGAACTAATAGAA
ATGAAACCAATAGTtaggcaaagaaaaataaagcacCAAAATCTAAGAGG
TTCCGTACCATTTACTTCCTGGTATTTCTTCAGATTTGTTTGCTACAAAA
CCAAAAATTacatagattttttatttcttcaaattGCTTCTGGTGAGCAT
TTTCGCGTCAAAATAATGTTGTTATATATAAATCACAGACCAGATTTACA
ACTCGTCAAACCACAAATGATTACGTTATTATCATCAGCTCATTTATTAC
AACTCggtatctattttgctgaccagaacgGCTCTCTTTCGAGGGGGAAT
TTGCGTATCTAAAAGATTTGTAGAAGTGTGCAGTGTCGTCACAAAAAAAC
TCGGAAGTACGCAGTGTCTCGTGAGCCTCctgggccatgaccctagacag
ttctagctcacaaattttataagaactggaagtgcgtggtgagccttagg
AGCCATCGAGGCTTCAAACTGAGTTCCACCACTTTACCAACTACAGAAGA
AAAACATGCCGTGACTTTTCTtaattcaatttttacaattaaaCCTTACC
TTTATGTTTTaacgagaaatttcaaattacttCCCATTTATTAGCAAAAA
GAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCC
TGAAAACGTTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAANTTTCtt
acattttgattttaatttttcaggaaacGTTTTGCTAACAAAAGACGAAT
CTAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGACGAAAAC
AGACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTTAATGA
GGTAATTTTGTTAATGAGTGTACTGTTCATAATTAGCTTACCATTCAAAT
TGAATAATGAAGCTATTTTCTCTTTGTCAGAACCGataatctttttagaa
attctTTTAACAGATTatttgttaaaggttttatttttacataagtgttc
ccgttttatatcagacacatattttatatctggacagtgtctacctattg
ttatatcatgctgatataagcaaaaagatgttcttattttcctctttctt
tgctccacatccgtgtcaatccaatttgaaaaagcttgtgaattaaaatt
gatgagtaagcaaaggatatcactcttatttaaaaacaaaacctttaatt
ttgtttttccagACTAGAACAGgttaactttttgtgttggatataacaac
ttatttttgaaattccatTCAAATGGTCTGATTCGGATGTAATTTGCTTC
TCTATAACTTGTGAAAAAAACGTGCTCTCCTTGGCAACACACCCTGCTCA
TAGACCCGCTAGCAGGATCTTTCAGGCAGTTGGGCTTAAATAAAGGACCA
AAATTCAATTGGGAAGATTAATATATTCCATTTTTTTGAGCCAGAAAACT
CAGTAGGGATGGAAAAAGTAGCACAATTCTttttagagtataattttcca
ctggggactaTATTTTCATCAGTTCTCTTTCAATATGAATAGGCTCTACT
TGATCTGTGAGAAGTGGCTGATTGCCATCGATTTTAAAGCCCCAAAGAGG
CTAGTTCTAGAattcctggatgggaaatgaagccacttatttcccaatCA
AAACACGTAACCTGTgtgtttttcaaataaaatttaaaagtgcacggcaa
acttaaggcttcaatttttcttgctttaaaAGGTAGAAGATTCTTCGGAT
CCGATTCTTCTCTAGCACCTTCGTACGATGACCCAGAAGGCTCCAAACAC
ACACTTCTAGTTTTCACatacttccagttcttataaaatttgtgtaCTAG
AACTTTCTTAGGTCAATGGCCCAGCTCaagtgacactgcgcacttctgac
tTGTTATCACAGCGTGAAATTTCCAAGCAAGCGGCCCGCgcaatgaaatt
ttggttttttttggtctttaaaatgaatgtcgagTTACGCAAAGTGAATC
AAAATTTCCGAGTTGTTCATATCAAGAGTTACAGGTTAAAATTTCCGATT
TAAGTGCTGGTCAGCAAAATTTTCCCCCAGtggcaaaaatcgggaaattt
tcgGGCTTAAATCGGGGAAGCAAAAAGtgatagaatatcaactttgtttt
ttgcATCCACCTTTTCCACCCCTTCCCTCAAAGTAGAACTAATAGAAATG
AAACCAATAGTtaggcaaagaaaaataaagcacCAAAATCTAAGAGGTTC
CGTACCATTTACTTCCTGGTATTTCTTCAGATTTGTTTGCTACAAAACCA
AAAATTacatagattttttatttcttcaaattGCTTCTGGTGAGCATTTT
CGCGTCAAAATAATGTTGTTATATATAAATCACAGACCAGATTTACAACT
CGTCAAACCACAAATGATTACGTTATTATCATCAGCTCATTTATTACAAC
TCggtatctattttgctgaccagaacgGCTCTCTTTCGAGGGGGAATTTG
CGTATCTAAAAGATTTGTAGAAGTGTGCAGTGTCGTCACAAAAAAACTCG
GAAGTACGCAGTGTCTCGTGAGCCTCctgggccatgaccctagacagttc
tagctcacaaattttataagaactggaagtgcgtggtgagccttaggAGC
CATCGAGGCTTCAAACTGAGTTCCACCACTTTACCAACTACAGAAGAAAA
ACATGCCGTGACTTTTCTtaattcaatttttacaattaaaCCTTACCTTT
ATGTTTTaacgagaaatttcaaattacttCCCATTTATTAGCAAAAAGAA
GATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGA
ATACGTTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAAGAAGTCGTAA
AAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGTGGACATTCT
TTCGGGAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCAC
ACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCT
GTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAGGATATC
TGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCC
AATTGCATACGCACCTTACCTTACCGGAGAATATCCTCAAGACATCCACA
AGATGAaggaaaaattcgtcaaaaatttggacaagtTGGAGACAGTTCTG
ATATCTGATTATCGGTCTGTTCGTGGATTGGAAATGACTCATACAATCAT
CTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGCAA
TCACACGAACCATAACAAATCTTGATGTCATTTCAACGAaacctttttca
caaaatgctTCCACGAGTATCGAACGAGTATCgaaagagcttttcaaaaa
tatgtcgATGGGACTTTAGCAATCAAGACTCACGTTGAATCGAGCAAAGA
CGCGGAAGATCTTCTGAAAGTACAATTCCAATACAACGAAAAGGACggct
caaaacaaacaaaaatcatTTCACAGAAATTGACCGATTTCAGTTTCGAC
GTTTCACAATCTCTAgatgattttaacaaaaatcaaGAGCTATGGCAAAA
CTATTTCAGGTATAATTTTTCTGTTGAAATTCTCGATTTTCAATGATCTT
TATTATTACAAAAAGCTCAATGAGAGGATATAAgtcatattttccaaaat
taggtGCCCGCTAATCCTTTAACCNATTGAAATTCTCGATTTTCAATTAT
CTTTATTATTACAAAAAGCTTAATGAGAGGATATAAGTCATATTTTCCTA
AATTAGGTGCCCGCTAATCCTTTAACCAAATATATTCCAGACTAAAAAAA
TACATCATTTTTTTCCTTCAGGATGGTGTTTACTCTTTCAACTTCCATTT
CATCTTTGGGAACGTAAGTCAATACAGTTGATGCCCTCTGATTCGGCATT
Ctgttattcgataagctcccattattcatgatattcatgacgtaatcttt
tatacggaagcacccgagataacccggaactagtggcaaaataacaaaag
actagtggcaaattttgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccagctggcacacaacgtt
gtttcaacgttcatctaacattatatggacgttgtgaacgttagataaac
gttaaaacaacgttgtgtgtcagctgggaaaagactagtggcaaatttga
ccactagttccggattattttgtgtgcttccgtttaaaagattacatcat
gaatatcatgaatcaaTCAATTAACAGTCATTTGACaaatttcctttaaa
tttctcataaaagattttttatcGGACATTCTATCGCTATTATCTCCCTG
GGGTTGGGATATTTTAAGATTCATGAtttaacgatttacgatgcacgatt
cacGATCCATTTTCCATGCATAAATTATGCTGATTTATGCGCAATCATGC
TAATCATGATATTTTGACAATTTACAAAGTTTCATTCGCAGAAACCAACG
acaaactcaattatttttaaaagcaTGATTCATGTTAGATTAtaccaacg
gattagaataggtggattaacttctctcgttgctcccaagagagatccat
tgtcttctcattgttacaagaaaaatctgtaaatgaccctGCGCACTcct
cgtttagttttttcattgtttttataagaacaattttccaatttatacag
tttcgaaaacgaatttgtcctatgattcgatcaattttgatgattttgca
aatattttaaatcctgcacttaagttttagcatcaacaaacgctagacca
gttttaatgtaaatttttaatcttttgtcaATGGCAATCTTCAGATAAGT
GAAAATTAACGTATGGTCTATAACTAAGAAACTATCGATGGGTCACGAAT
GGGTTGCATACTGGTGAAAGAAGACTGTATTTAGaattaggaaaataaat
ttcaaattatttggctaatttctgcattggatagaaagggctaaaaaagt
gcattttcttatttaaaatgtaccacgtgatacgtaatgaccaatgaaaa
tgttgaaagtaatgattttttacaacttttttacaacttatcaagtttta
attgctagcatactcgtaaaaaagtttaataacctaacgaggagtgtttt
ctatgagttcttaatccacctattctaatccgttgattatacaaattata
ttcaACGAAGCTTTCATTGCATTCTCCCGACTGTACCATGATCcttaaaa
agaaagtaaagcaCGTGCAGACACTTTCTGCGCTCTCATTGTTCTTAtct
gttgtttacttcgtacattacggtccgcaaaacatGGTGCCGAGTATTGT
TAGTCagtatattgtgtagtctaagtaaaAGCCTTGATTAGTCGTAGCTT
TATTGCCTACTTATTAGTTTTTTACATAAATTTGATGTCGTAAACAAAAA
CGAGAAAAGATTACGCCATTGTTTTGGAAATATGTTagataatttaagtt
ttatgtaaatactttatgcatggatcgcgaatcgtgcatcgtaaatcgtt
agatcgtccATCTTAAATTGCACCAACCCGNGTATTTCAATTtccataat
ttttgtttttgcctttctgaaaggtaaagctTCTATTGATGATATTTATT
AATCATTTCTCCTGCATATAGTAACAAATGGGATGGCAAAACCATGGAAA
GTTTGACCTTGAATGATGGAACTACGCtcagtttttatggtaagtttgat
tcgaaattttgttttgatatacggcaaattttataaattttcgaCTATAC
AATCAAAAGCTCGCGAGTACCCAAAACGAAACATCCTTATTTNGGAATAG
AGTATGAATTTTTAGACGATCCTATCATCAACACAATGTCACAACAAAag
gaataccttatcggccctttttacgccggccccttttacgccgccCCTTA
TTACGCCATAGCCTAATGTTGGGCTTACGCCATttagggccgttaataac
gccaaaatttataANTTCTGGTAAAAAACCTTGGAACTTATGATAATATT
GAAGGCCAATCTGTATCATAGGATTTGTACATCTGTTACATAATATTTTC
TATCCatgatttggtttgattttatttGATCATTCATTTGATTCAATGTT
CAAATNACCTCAAATTAATAAAcaatgactaaaatttacattaaaatgtc
attttcagtagtaaactgttgaaaatttcatcgaaaattactgattttta
aatataatatTTCACNAAATGTGAATAAACAGACGATTAGACACTGCTAG
GCAACAAAGGGCTAGCATTACGAGATTTAGTGTAGTGGATGTGTAGTGGa
acgagttttgaaaaattttgggaACACCCTAATACAGTAAACTCTCttta
tttcgaacccctactgttcgaatctttctataattcgaactaaaatattt
gtcCCCTCAGCTGAAAAATATGCAATacactctgtaattcgaatctttct
ctaattcgaagaaaatttctgCCCCTTTCAAGATCGAGTTAGAGAGACTT
AACAGTAGCGACAGTCTTTTCTTCNAAATTgcgaaataataataaaaaat
taaccccgcttttaggttaaaattgtaaaatcttggcccttttaCACCGG
TCGTTATTACGCCACGagaccaaaaataacgccaataagggccggtgtaa
aaagggccgataacgTAATTCGGGAGGcagataaatttgaaaacggagTT
TAGTTCGGGGGGGGGTTCGACACTCTTGAAAGATTCCTTATAAAGACCGA
ATGTTCTGTTTCCTCGATTTTGCAATACTATATAAACTTCAAGTGTAGAA
AAAACTACCCTCGTTCGCAATGGAATGTAATATTCCAATCTTCATAATTT
TTGTTTTTGCTGTTCTGAAAGGTAAAGCTTCTATGGATGATATATATTAA
TAATTTCTCTTGCATATAGCAACAAATGGGATGGCAAAACCATGGAAAGT
GTGACCTTGAATGATGGAACTACACTCAGTTTTGTTGGTAAGTTTGATTC
GAAATTTCGTTTTGATTTTATAATTTTTCAACTATACAATCAAAACCTCG
CGAGTACCCAAACCGAAACATCCTAATTTTCTATTCTGGTGTTCTACATT
CTCTGGACAAAAACCTTGGAGCATATGATAATTTAGGCCAATCATAGGAT
TTGTACATCTTTTGCATGATATTTTCTATCCAGTTTAAAGGGAGAAAATG
CACTTTAAATGTATCTGAAGATTTGATTTGATTTGATTTGATTTGATTTA
ATTTGATTTTTCTTCATCATTCATTTGATTCAATGTTCAAATCATAATTT
CATTTCATTGACAGTAGTAAACAAACAGACGATTAGACACTACCAGACAA
CAAAGGGCTAGCCGCTAGCCGTACGAGATTTAGTATAGCGGGTGTGTAGC
GGAACAAGTTTTGAAAAACTTTGGGAACACCCTAATACAGTaaactctct
ttaattcgaacccctactattcgaatctttctataattcgaactaaaata
tttgtcCCCTCAGCTGAAAAATATGCAATacactctgtaattcgaatctt
tccctAATTCTAAGAAAATTTCTGCCCCTCTCAAgatcgagttaaagaga
cttagCAGTAGCGACAGTCTTTTCTTCATTCAAGCATCAGAATACTGACC
CAAAAATGGACTAACACCGTCATTTATAATTTTGAAACCCATAGGCTCAG
AGTTCCTACGCATAGCATAAGCAAcctggaatatttttcaagttgtcatt
tttgatttacagtgggaaatttgaatttagcgCTCATttctcacttacta
aaataaaaatcaaatttcggaagttgcgttttttctaagaaagtgtgacc
agtgaaagaataacagaatttgattggctatgtttttaACCGTCTTTAAA
ATCTTGGAAATTCAAACTCACAGCCCaaaccatgctatacatttcacCAT
CattctataaaataaaaaaataatagcaTTGATCTCTAGGCTACAAAAAT
AAATGTCACTGGACTTGTCCCACagaatttgagcaaaaaaaaaatgaaca
aaattagAGAGGGTACTTTTTTCGGTATTCTCAGAGACTAATGACGTCAC
CCCCTCCCTTCAAGATACTCAAGTAAGGTTTAACGTTTTAGAAACAATTT
GAGAATATGTTAAGactagaaattgaaaatttaccaTTTTACTTTTAAGA
TATTTCAATGGCCTCACTTGAAAGGGTTTTTCTCTTATTACGAAATGGGA
GGGACACAAAGACACTCAACTGAAGTCATAATAAAAGAAATGTTAATTTC
ATCCTCAAGGGAACGATTTAGTCTTTTTCTTCTCctgctaaaaatgaaag
tttcgTGCGTTTGtttcatttgctttttatatgTGAATGAATAAATTTGA
ACGAAGAAATTTCTAGATCCTTTAACCTTTCATTTTCTGAACCTCTAGTG
TTGTATAATTTAGTGAAAGTACCCGTGCAAAATTGAATTTATTCAAgcta
agatttttttaaataaaactagTTTAGCTTGCAGCTTTATTTGACAATTT
GAGAAACACATTACATATTAGCACTTCTATTTTTGTatcttttatcacaa
tttcgtgattctttttaagaataaggaatAATTTTTTCGGATTGCATTTC
AAATAGTTCGTGTGTACTTTTCTGCGTTATCTTTGCTGTTTGTGTTGGAT
TAGTTCAcgcaaaatttcacttttgacaaataattctattttaaaaactt
tttcgactttttcacattttgagaaatttttcgtggaatttattttttct
cagaATGCGATCGAGTTTCGTTTTCTGCATTGAAAAGATTAATTTCCTTC
TGaacaaaaacttttcaacaaaaccaaaaaataattAGTTCATCAATCTG
GAAATAAATTTCCAATTCCGtttccaatttttcagctttgaatcttcttt
tagtttttgagatctagatcttcatttttttctaacttCAGTTTTTTTAC
CGTCACAAATAAAAGTGATTTCTCGCtgagcaaaaagttttcattcaaaa
ttcaaaattttttcgccatcaattcggaaatatttttctcgttctgtttt
caaaatttcagctgCAAAGTATTTTTGGTTCCTGAGAtataaccgtacat
cctgtgcccaagttcaggagttgccataaagccattatggtaataaccgg
gagggcacattgctatacattgcaTGGTTCCTGAGATATCGagattcatt
ttttgttgaatttttttatttacacgcttttttttttataagaatacact
ttataagaatgtccatgataaaaatggccaaaaaattaagaatatggtaa
gaatatcaccatcatggaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttctccaa
aaagttaagaatatccatgatgaaataaaaaaaaaccattcttataaaaa
aaaaagcgtgtactccGTGAAAAGTttgagtttcttctttttttcttcag
atgtttggaaaattttgctcgaaaagaaattcgcgaaattcgaagaaatt
ttCCACCAAAAACCGAACATCGTCAACTCGTTG

Coding sequence (CDS) from alignment at scaffold_361:26325..37757+

>TCONS_00061848 ID=TCONS_00061848|Name=TCONS_00061848|organism=Clytia hemisphaerica|type=CDS|length=5628bp|location=Sequence derived from alignment at scaffold_361:26325..37757+ (Clytia hemisphaerica)
GAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGATTTGATTATAAA
CGTTACTTTCGACCCATTCAGTGCCCTTGATAAAAAAGTCGACCATTCAT
TTAACGAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCTC
ATCTCATTATCACTTTCTGAAGCTGttggagaaagaaaaaatgtcACCGA
TTTTTATAACTGTTCCTCGCTACCATCCAAAAATATTGCTGACGTCATGC
TGCTCTTAAAAAACAAATACAAACCGCGAAGAGTTCATTTCCTTTTCGAT
GAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCAGAAACACTACGCAG
CCGTTTGGAGAGTAAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAAA
GTGTACAGAAATCTCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTCA
CAGGAGATTGATTTAAAAAGCTCAGGCATGGAACTTTTCAAACTACCAAC
CACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtttTGGAAG
GTGAAATCGAAAGCTCGCCCTGCTCCTTAAACTTAGAAATTCGATCGAAA
GgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCGAGGA
AACCCAATCAAATGGAGATGACGAAAACAGACCGGGTAGCTCTCAATCAA
CAACAAAAGTTGAATTTCAGGTTAATGAGCAAAAAGAAGATCGAGAAGCA
AGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGAATACGTTTTTAA
GTCGCAGCCACAGACGAGTGAAAACGAAGAAGTCGTAAAAGAACTGTCCA
CTACATATACCTATATGAAAGGGAAATGTGGACATTCTTTCGGGAGCTTT
TTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCACACCTTTATTTGC
TTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAGA
GAAAGGAGGACGAAGTTGTGGTATTGTGCGAGGATATCTGTCAAGTAAAA
ATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATACGC
ACCTTACCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAaggaaa
aattcgtcaaaaatttggacaagtTGGAGACAGTTCTGATATCTGATTAT
CGGTCTGTTCGTGGATTGGAAATGACTCATACAATCATCTTTGTGGATCC
AGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGCAATCACACGAACCA
TAACAAATCTTGATGTCATTTCAACGAaacctttttcacaaaatgctTCC
ACGAGTATCGAACGAGTATCgaaagagcttttcaaaaatatgtcgATGGG
ACTTTAGGAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAAGATTTGA
TTATAAACGTTACTTTCGACCCATTCAGTGCCCTTGATAAAAAAGTCGAC
CATTCATTTAACGAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGA
AAATCTCATCTCATTATCACTTTCTGAAGCTGttggagaaagaaaaaatg
tcACCGATTTTTATAACTGTTCCTCGCTACCATCCAAAAATATTGCTGAC
GTCATGCTGCTCTTAAAAAACAAATACAAACCGCGAAGAGTTCATTTCCT
TTTCGATGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCAGAAACAC
TACGCAGCCGTTTGGAGAGTAAATTTCGAGAATCAGTTGTCGTGATTGCC
CTCCAAAGTGTACAGAAATCTCGAAAAATAACCGAGGAAGGCAAGGTCAC
CAATTCACAGGAGATTGATTTAAAAAGCTCAGGCATGGAACTTTTCAAAC
TACCAACCACAATGAGGATGAGCAGTTGCTTACataaattgaaagaagtt
tTGGAAGGTGAAATCGAAAGCTCGCCCTGCTCCTTAAACTTAGAAATTCG
ATCGAAAGgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAA
TCGAGGAAACCCAATCAAATGGAGATGACGAAAACAGACCGGGTAGCTCT
CAATCAACAACAAAAGTTGAATTTCAGGTTAATGAGCAAAAAGAAGATCG
AGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCTGAATACG
TTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAAGAAGTCGTAAAAGAA
CTGTCCACTACATATACCTATATGAAAGGGAAATGTGGACATTCTTTCGG
GAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTCACACCTT
TATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTG
AATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAGGATATCTGTCA
AGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTG
CATACGCACCTTACCTTACCGGAGAATATCCTCAAGACATCCACAAGATG
AaggaaaaattcgtcaaaaatttggacaagtTGGAGACAGTTCTGATATC
TGATTATCGGTCTGTTCGTGGATTGGAAATGACTCATACAATCATCTTTG
TGGATCCAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGCAATCACA
CGAACCATAACAAATCTTGATGTCATTTCAACGAaacctttttcacaaaa
tgctTCCACGAGTATCGAACGAGTATCgaaagagcttttcaaaaatatgt
cgATGGGACTTTAGGAAATTGCAAGGAAACTGCTGAAAATGAGCAACCAA
GATTTGATTATAAACGTTACTTTCGACCCATTCAGTGCCCTTGATAAAAA
AGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAAAAATTGACACGAA
AACGAGAAAATCTCATCTCATTATCACTTTCTGAAGCTGttggagaaaga
aaaaatgtcACCGATTTTTATAACTGTTCCTCGCTACCATCCAAAAATAT
TGCTGACGTCATGCTGCTCTTAAAAAACAAATACAAACCGCGAAGAGTTC
ATTTCCTTTTCGATGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCA
GAAACACTACGCAGCCGTTTGGAGAGTAAATTTCGAGAATCAGTTGTCGT
GATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAACCGAGGAAGGCA
AGGTCACCAATTCACAGGAGATTGATTTAAAAAGCTCAGGCATGGAACTT
TTCAAACTACCAACCACAATGAGGATGAGCAGTTGCTTACataaattgaa
agaagtttTGGAAGGTGAAATCGAAAGCTCGCCCTGCTCCTTAAACTTAG
AAATTCGATCGAAAGgaaacGTTTTGCTAACAAAAGACGAATCTAACAAG
GCCATAATCGAGGAAACCCAATCAAATGGAGATGACGAAAACAGACCGGG
TAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTTAATGAGCAAAAAG
AAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCT
GAATACGTTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAAGAAGTCGT
AAAAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGTGGACATT
CTTTCGGGAGCTTTTTAAAACCACGAATCTTTTATTTCACCAAAGCTTTC
ACACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTT
CTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAGGATA
TCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGT
CCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCAAGACATCCA
CAAGATGAaggaaaaattcgtcaaaaatttggacaagtTGGAGACAGTTC
TGATATCTGATTATCGGTCTGTTCGTGGATTGGAAATGACTCATACAATC
ATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCGTCGAAGC
AATCACACGAACCATAACAAATCTTGATGTCATTTCAACGAaaccttttt
cacaaaatgctTCCACGAGTATCGAACGAGTATCgaaagagcttttcaaa
aatatgtcgATGGGACTTTAGGAAATTGCAAGGAAACTGCTGAAAATGAG
CAACCAAGATTTGATTATAAACGTTACTTTCGACCCATTCAGTGCCCTTG
ATAAAAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAAAAATTG
ACACGAAAACGAGAAAATCTCATCTCATTATCACTTTCTGAAGCTGttgg
agaaagaaaaaatgtcACCGATTTTTATAACTGTTCCTCGCTACCATCCA
AAAATATTGCTGACGTCATGCTGCTCTTAAAAAACAAATACAAACCGCGA
AGAGTTCATTTCCTTTTCGATGAAGTTCCGCAAGAGCTGTTCACAAAGAC
CTACTCAGAAACACTACGCAGCCGTTTGGAGAGTAAATTTCGAGAATCAG
TTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAACCGAG
GAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAAAAAGCTCAGGCAT
GGAACTTTTCAAACTACCAACCACAATGAGGATGAGCAGTTGCTTACata
aattgaaagaagtttTGGAAGGTGAAATCGAAAGCTCGCCCTGCTCCTTA
AACTTAGAAATTCGATCGAAAGgaaacGTTTTGCTAACAAAAGACGAATC
TAACAAGGCCATAATCGAGGAAACCCAATCAAATGGAGATGACGAAAACA
GACCGGGTAGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTTAATGAG
CAAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACG
CGACCCTGAATACGTTTTTAAGTCGCAGCCACAGACGAGTGAAAACGAAG
AAGTCGTAAAAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGT
GGACATTCTTTCGGGAGCTTTTTAAAACCACGAATCTTTTATTTCACCAA
AGCTTTCACACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCC
TCCAGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGC
GAGGATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACA
CAAGCGTCCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCAAG
ACATCCACAAGATGAaggaaaaattcgtcaaaaatttggacaagtTGGAG
ACAGTTCTGATATCTGATTATCGGTCTGTTCGTGGATTGGAAATGACTCA
TACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCG
TCGAAGCAATCACACGAACCATAACAAATCTTGATGTCATTTCAACGAaa
cctttttcacaaaatgctTCCACGAGTATCGAACGAGTATCgaaagagct
tttcaaaaatatgtcgATGGGACTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038796XLOC_038796Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061848-exon-scaffold_361-1491911889:26325..26926TCONS_00061848-exon-scaffold_361-1491911889:26325..26926Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:26325..26926TCONS_00061848-exon-scaffold_361-1510915933:26325..26926Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:26325..26926TCONS_00061848-exon-scaffold_361-1575043694:26325..26926Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1491911889:27053..27087TCONS_00061848-exon-scaffold_361-1491911889:27053..27087Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:27053..27087TCONS_00061848-exon-scaffold_361-1510915933:27053..27087Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:27053..27087TCONS_00061848-exon-scaffold_361-1575043694:27053..27087Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1491911889:28483..28575TCONS_00061848-exon-scaffold_361-1491911889:28483..28575Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:28483..28575TCONS_00061848-exon-scaffold_361-1510915933:28483..28575Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:28483..28575TCONS_00061848-exon-scaffold_361-1575043694:28483..28575Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1491911889:30516..31383TCONS_00061848-exon-scaffold_361-1491911889:30516..31383Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:30516..31383TCONS_00061848-exon-scaffold_361-1510915933:30516..31383Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:30516..31383TCONS_00061848-exon-scaffold_361-1575043694:30516..31383Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1491911889:31646..31687TCONS_00061848-exon-scaffold_361-1491911889:31646..31687Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:31646..31687TCONS_00061848-exon-scaffold_361-1510915933:31646..31687Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:31646..31687TCONS_00061848-exon-scaffold_361-1575043694:31646..31687Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1491911889:33546..33613TCONS_00061848-exon-scaffold_361-1491911889:33546..33613Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:33546..33613TCONS_00061848-exon-scaffold_361-1510915933:33546..33613Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:33546..33613TCONS_00061848-exon-scaffold_361-1575043694:33546..33613Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1491911889:37675..37757TCONS_00061848-exon-scaffold_361-1491911889:37675..37757Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1510915933:37675..37757TCONS_00061848-exon-scaffold_361-1510915933:37675..37757Clytia hemisphaericaexon
TCONS_00061848-exon-scaffold_361-1575043694:37675..37757TCONS_00061848-exon-scaffold_361-1575043694:37675..37757Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061848-proteinTCONS_00061848-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:26325..37757 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0242483	0.0687059	0	0	0	0	0.0688722	0	0.513507	0.0983345	0.2157	0.504584	0.10074	1.88503e-07	0.000121171	0	1.56184	0.305968	0.352838	0	0.00170664	0.374172	0	0	0.70918	0.194385	0	0.0324179
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061848 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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