TCONS_00061639 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061639
Unique NameTCONS_00061639
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4087

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061639 ID=TCONS_00061639|Name=TCONS_00061639|organism=Clytia hemisphaerica|type=transcript|length=4087bp
AAATTACGTCGCAGGGTCGACGGCGTTCTATCGTCGTCATTACCGACCCC
AATGTCGCCGCTTAAGGAGACAACACCAGAGCCGCCCTTTCTAAGGGTTC
CCTCTATCAGCTTCAGTCATGGCCAGGAAGTTGAGTCATCGTCTGTAACG
ACCCAAAAGGGGGTTTCGAACACTGTCCTTAACGATAGCGACCGACTCCA
AGTCCAATCGGTCACGAACTTCTCTCAAAGACGTGAAAGCTTCTTATACC
GATCTGATAGCGAAGCAGAAAACTCTCAACCACCAAGGTCATCGAGGCAT
TCTTCAGTCTCCAGTGAAGGGATACATGGAGATGAACTCGTCACGCCCTT
CGCCCAAGTTTTATCCTCTCTCAAAAGCGTACGAAGTAATTTCGTACTGC
TAACAAATATACGTNGATACATGGAGATGAACTCGTCACACCCTTCGCCC
AAGTTTTATCCTCTCTCAAAAGCGTACGAAGTAATTTCGTACTGCTAACA
AATATACGTCAAAACCGCCTCAGACGTGGTTCTGAAGGATTCCATTTAAA
TTCGAGATTATGTCAATTATATGAAATCAATGATGGCAGCATGATTCGCG
ATGACATGTACAAAAAGCTAACGATGGAAACACTGAAGGAATTCGATTGG
TGTTTAGACCAATTAGACACTTTAAGAGCAAGTATGTCCATCAGCGAAAT
GGCTtcaaacaaattcaaaaggttattgGATCgggaattgaaagattttt
ccgAAACTGGTGGATCTGAAATCTCAGCATGGGTCTTCGATAACTTTGTT
GACAAATCACTAGAATCGCTACCAAATAAAGATTCAAGGAAATTAAGAGC
TCGTTCAAAAAGTTTGGTTAAAAGTTTAAAGAAGTTGTCTCGAAGTGTCA
GCTGTTCTGGCTCCGTTCCCAGATTTGGGGCTGAATGTAAAGACGAAGAA
ACCCTGGAACAGATTTTCAACTGTGTTGACACTTGGGATTTCGATGTGTT
CAAGTTGGCCGAATATACTGGAAATCGACCTCTCATGTCCATCACATACA
CCATATTACAGACACGTGATTTACTGAAGATGTTCAAAATCAAACCCTGG
GTTTTCTCCAACTATATTACGTTGGTTGAATCACATTATATCAAAGATAT
TCCATTTCATAATTCGACACACGCTGCTGATGTTGTTCATGCGACTCACG
TTCTCCTTTCGTCTGGTGCTTTTGAGGGCGTGTTCACTGACCTCGAGATT
TTGGCAGCTCTGATCGCGGCAGCAGTCCACGACGTCGACCATCCTGGAGT
CAACAATAATTTCCTAGTCAACTCAAGTTCTGAAATGGCTTTACTTTATA
ACGACGAATCAGTCCTCGAAAATCATCATTTAGCTGTAGCTTTCCAACTA
ATGCAAGGTGAAAATTGTGAtattttggaaagtttttcGAAGGCTGAACG
ACAACAATTTCGAAAAATGGTGATTGAAATGgtttTAGCCACAGACAATG
CGAAACACATGAACATCCTTGGTTCTTTAAAAACTATGGTGGAAACAAAG
AAACTAAGTGAGCAGTCCATGAGACCAGTTCAACTTGAATCCACTAGTGA
AAAAATGCATGTGTTGAAATGTTTAGTACATTGTGCTGACTTAAGTAACC
CTACGCGGCCGCTTCCGATGTACGAGACGTGGGTTGAAAGATTGATGGAA
GAATTCTTCAGACagGGAGATGTGGAGCGCGATCGTAAAATGGAGATCAG
CCCGATGATGGACAGACACAACGCAAATATCGAGAAATCGCAGGTCGTTT
TCATCGATTACGTAGTTCATCCGTTATGGGAAACTTGGGCTGATCTCGTT
TACCCAGACGCTCAACCCATTCTTAATAACTTACAAACTAATCGAGAATA
CTATCGGTCTCGATGCCCACAAAGTCCTTCGAATACGCCCGCGGCAACGC
CCAATAGTTCACCCTTCCCGCCCAGGAAGAGTATGCCTGCTGCAGTCGAT
ACTACTAAAACAAAAAACATCATTGCGGAACACCAAAAAAAAGCTAACCG
GAACTCTCTCGATTCGGATAGTAATACGGATACTGACGAGCCTTCTACAG
CGGATCGTGCGTTTCTTGTGCGGAACGAtatcaaattatttcaaaacgAA
TCGAACGCGAATAATAATAACCCTAATTCGTATATGATTATTGACCGCCG
GCGTTCAGATACGGATGCTTTGAACGCTATGTCGGACGTTAAATTAGTAC
GtcagaaattattaaaatatgCACACGTGAAATCACAAGATTCAACTGAT
ATTGACAATCACCAAGACTCGAAAAATCTTCACCAAACACAGAATAGTGT
TTTGAATAATAACACACGGACTACCAAGGAAATTGAGGATGGAACGGAAG
ATTTGAAGATCGAAGACGCTGAGTAGGGAAGATTTGATTTTCTGGGGATT
TTTCTGGAGTCGTTGGAGAAGGGCCGTTGAGTGCCGGGTATCAAGGTCCT
CGTTGTAAGCATGTGTACGTCTTTGATAGACCCTCAACGCACGATTTGTA
ACGTAATCGTTATATGATGTCATCGAAATGGTAGTGAGATTGAATCGTTC
TGTGATGAAAGAAACTGCTAGTCAGGTTGGTCAAATCTTCGTGaaataaa
ttatcataaattatAGCATATATTATGCAAAAACGTCTTCAATGAGGGGA
CTTCTTTACATAAAGAAAAATCATGCGAAAAAGAAACATTTGAATCTCAC
AGCAATAAACATGGAGATGAAAAATCACGTTACAGCAAAACATCCTGGAA
ATGTTATCTGGCTTAGTTTTGCAAAATACACCAAAGCTTTTGGAACGCTA
AATTATGTCGTTAAAAGATATGGTTAAGAATGtcgaaatttagaaaattt
acattaaattatgaaaaaagaagaacaaagaatATTGAGATGGTATATTT
TTGTTGGAGTAGAAACAAAAGGGTTTCTATAATTACATGGGAAGTCTTTA
TGAAGATATTAGAAACACAATTATTATATTTGTGGGTGAGaactttttta
taatattttcttttatatATACTCACTCAACTCCAAACCCCCCTCTGgtt
ctttttaaatctgaatGAAATATTGCATGTATAAATGACCATGCCAAAGG
CCACCAATTTTTCGCGCTCAACTTATAGCTTTTTCGGACATGCCATAAGT
TACACGAGCTAAGTGTCTTTCCATCTTACGCATAAAACACCGTTCTTTTT
TCCGGTTTTCTAAACGTACATTTTCCCCAAACTCAGAAATAAAGATTTGA
ATAGACATCTGGAAATTATTTTACGGAATTCAAACATTAGTAAAAAAAAT
CCGTAGCTCTGactgccattttgaaaaaacgaaGAAATCTCATCACCAGT
TTCACTTAATTTAAAGAATAAAGTTAAAGAATAAGtgctaatagaccttt
ttataaattacgtcacgaacttCACTtgtctcgtattcaaacaattacca
tggtgattatgtcccttgagacattaaataatttttttaagaaaataaag
gagttgtaataaaatccgctgtgagttaatcaccatggcaataagctCAA
AACGAGGAagcgatgttcgtgacgtaatttatgaaaaggtctattcatga
tattcatgatgtaatcttttatacggaagcacacaaaataatccggaact
agtggcaaaatttgccactagtcttttgttattttgccagGTTTCCtggt
tatctcgggtgcttccgtataaaagattacgtcatgaatatcatgaattt
gctGTGCAAAATCCATTTGTTGTCTCATACGAAAAACTTTGCTTTTAGCA
CTGTCACTTTGTAATGGGAATTGCAATGAAGATGACCATTCCAGTCATGG
TTTTAAAGTTCGGTGATTATTCACCATTCCTCCTTTGTATAAAATTATCT
TAACTACATTTTTTCTAGTATTGGAAAGTAAAAAGTCAGTTGTTACATAC
TCAATTATATGATATTATATATTTAGTTTTAATTTATCCCAAAGATGTTT
TCACACcaaattaaaaatatgtacaaagtCATAAATT
Run BLAST on NCBI

transcript from alignment at scaffold_36:50445..60531-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061639 ID=TCONS_00061639|Name=TCONS_00061639|organism=Clytia hemisphaerica|type=transcript|length=10087bp|location=Sequence derived from alignment at scaffold_36:50445..60531- (Clytia hemisphaerica)
AAATTACGTCGCAGGGTCGACGGCGTTCTATCGTCGTCATTACCGACCCC
AATGTCGCCGCTTAAGGAGACAACACCAGAGCCGCCCTTTCTAAGGGTTC
CCTCTATCAGGTATGGATTTAAAAGAATTCAGTTGATTCTCTCTAATTCG
ACCTTCAAGGGACTTAAAATTATATTCGAATTAGAGAAAGATTCGAATAA
CAGAATCAGTAATTTATACCACGTTTCAGCTGAGCGGTCCAAAATTCTAG
ATCAAATTATAGAAATATTCGAATAATAGAGATTCGAATTAGAGAGGGTC
GACTATATTGAGTATGTGTGAGCAGCTTCGAATTTTCATTTCTCCGAATC
TCTAAAGTTTGTATTTTGAGACGTTTTAAAGCGCGCAGATAATGTTGTAA
TAGTGGACAAACTTCGAAATCTATTAGCTTTTAAAAACAGCTTTTAATCC
CAGAACTAAAATAGGTCCAATGTTCTTTGTGCTGAGTTCAGAACTATCAA
TGTGAGAACACCCCCTTCTCACAAACCCACTGGGAAACCTCCCCACTGTA
AAAATTGACCAGAATATTGTCCCCGGTGGAAGATCATCCTCCCATTTTTG
TCCCCACTGAAAATAATCAAAAAAAGCCAATCCTCACAGCAAAATATTCC
AATCCCGCTGAATTTTCTGACTTGAAAACAAAAGAATTTAAATCCTCGAC
CATGAAAAATATGGAATATTAACCCCCATTGAGTTTCAGTCCGTTACTTT
TACTCCCACTAGCCGAGAAATCCTAGCGGGTCTGTGAGAAGGGGGCGTGT
GAGAATTCGCACCAAATACCTTACGGAATATACTTAAAATGTGCCTTCAT
TTCTCAATAACAACTTTAATAATTTATGTTTTCTCCATTTCCTGTTTTTT
TTGTACTTGCCTTGTCCCTCTTCCGTTCCCTATTATTTGTCCTCATTATT
TATTTATTTTCTAAGTATGGCAGTTGAAAAAATGGTACGAACGTTTAAAA
TTACTGGTATTCTTTGCAATGAATAAAGTTTTCCGAAAATTACCAGGAAT
TGATCACTTTGATCTACTTGAGAAAAAATCTTTGTTTTTGTTTGAATCAA
AGAATCTTAAAATGCAAAATACAAAAGCCTCGCTCTGAGTGCAATGTTAA
TGTTCGTTACTCTGATGACTCATGTTACATACAGTTTCAGTCCTAGAAGA
CATACTTCAAAACTACTCAAAGTGGTTTCGAACCATATCCTAAAGATTTT
TCATTCTTCTCTTTCCAGCTTCAGTCATGGCCAGGAAGTTGAGTCATCGT
CTGTAACGACCCAAAAGGGGGTTTCGAACACTGTCCTTAACGATAGCGAC
CGACTCCAAGTCCAATCGGTCACGAACTTCTCTCAAAGACGTGAAAGCTT
CTTATACCGATCTGATAGCGAAGCAGAAAACTCTCAACCACCAAGGTCAT
CGAGGCATTCTTCAGTCTCCAGTGAAGGGTAAGCAAGACAAAACCTTTTC
ATTTTTCGTGCTCAGAATCTCCTTAAAATCTTCAAAGGGATCTCGAATTT
TCAGATATGTTTTACAGAGGTAGATCGAAAAAGGCCTTGAGTCAGAATAA
TAAAATAACCCTTTATTAATTCTCTAGGGTAGCAAGAAATTAATTCGATA
TAAAAGTGCACTTAAATTTCAAAACACTTTTAAAACTGAGAGAACCATTG
TTCAATATGGAATATTAAGAGACGACAAGTTCGCCTTCAATCTCTTTATT
CCAAACTACTTTAATTCGATCTTTAAGGGTCTTAAGATATTTTTTTTCGA
ATTACAGAACGATTCGAATTAAAGAGTATTTCAAACTAAATTCCAGTTGG
AGGGGCCGATGTTTTAGTTCGAATTACAGAAAGATTCGAATTATAGAGGT
TCGAATTAGAGAGAGTTGACTGTATATATTTTCAATCTCTTTACAGGATA
CATGGAGATGAACTCGTCACGCCCTTCGCCCAAGTTTTATCCTCTCTCAA
AAGCGTACGAAGTAATTTCGTACTGCTAACAAATATACGTNGATACATGG
AGATGAACTCGTCACACCCTTCGCCCAAGTTTTATCCTCTCTCAAAAGCG
TACGAAGTAATTTCGTACTGCTAACAAATATACGTCAAAACCGCCTCAGA
CGTGGTTCTGAAGGATTCCATTTAAATTCGAGATTATGTCAATTATATGA
AATCAATGATGGCAGCATGATTCGCGATGACATGTACAAAAAGGTTGGTT
TTATTTTTATTCGAAAAGTCGTTCGTTCGTTCGTTCGTTCGTTCGTGTTA
AACTGGTTAGAAAAATGAAAGTGTTACTGCCTTAGTGTTACTAAACTTTT
AGCACTCCTTAAGGGAAAAATCATTTAATAAATATGAGATTTGAAAAAAC
ATACTTTCCCACTTCCAACGAATACCTGATTTTCATGTTTTGAAAAAAAA
GGTTCTGTCTTGCTAGAATAATTTTAACGGATTTTACGGGCTTTTGCCGA
TTGTTCTCGTAATGTATTGTTTTTACATAACTGTTCTCGTTTCATATCAG
GCACATATTTCATATCAGGACAGTGTCTGTATATTGTTATATTGTGCTGA
TATAAACAAAAAAAAATTTTTCTTTTCCTTTTTCTGACCAATCATCCGTG
TTACAATCCAATGTGAAAAAGCTTGTGAATTAGAATTGATGAGTAAGCAA
ACGATATCACTCTTATTTAAAAACAAAACCTTTAATGTATTTTCTTCTCT
CAAAAGCTAACGATGGAAACACTGAAGGAATTCGATTGGTGTTTAGACCA
ATTAGACACTTTAAGAGCAAGTATGTCCATCAGCGAAATGGCTTCAAACA
AATTCAAAAGGTTATTGGATCGGGAATTGAAAGATTTTTCCGAAACTGGT
GGATCTGAAATCTCAGCATGGGTCTTCGATAACTTTGTTGGTAAGTAATG
TTATCGTTTTTTAATACACTTCTGTGTCACTGAACGGAACCCCAGCCCCA
CTGGAAAATTTGGCAGAATTTTCGTCCCCGGTGGGAAAATACCCTGGAAT
TTCAGCCCCACTGGGAATTTGACTTAGATTTCATCCCCACTTCGAGATCC
AATGTTTAAAAATTGCACTTCAAAACCATCTCCACTGGATTTTTTACCTT
GGAACAATAAAATTTTTATCCCCATTGAGATTTCAACAGGGGTTTTTATC
CCCACTTAGGAAAAAGTTCCACCGGGCCTGTGAGACAGGGGTGTTTTAAT
ATCTTTTGCGTTTATATGGATTTTGTTTTTAGAGGAACTAAGATTTTTAG
TTCTTGCCCGAAACTTAAAAAATAAATGCAATACGCTTTTTCAGAAATTA
ATTGGAGGGCAATGACTGCTTTGTTTTGAATGTTATTAAATCCATTGACT
CTTCAAGTAGTACTTTTATGAATAGAATATACTTCTTATGTTTTTTTACA
GGAAATGAACTTATGCTGGTTTTGTAGTTTTTGCCCAAGTAATTTCGATT
TAGAAATGCTGTAAAACCAGCCGGTTAGGTACAGGGCAGTTTTCTGAATT
ACCGGGCTTATTAATTACCTTTTGTATTTCCTCTACAGACAAATCACTAG
AATCGCTACCAAATAAAGATTCAAGGAAATTAAGAGCTCGTTCAAAAAGT
TTGGTTAAAAGTTTAAAGAAGTTGTCTCGAAGTGTCAGCTGTTCTGGCTC
CGTTCCCAGATTTGGGGCTGAATGTAAAGACGAAGAAACCCTGGAACAGG
TGTGCATGCTGTCATTTTTGTCAAGTCGAGTTTGAAATTGTTCTTTTAAA
ATGTTGATTACAGTTACTCACAATGATTTGATTGCTTTTGTCTTTTGCTT
TTTGTTTTTTACACCATTCTAAACTAAATTTAGTTTTTACAAAAAGTGCC
TACCATTTTGTGAGTCATCAAAGCCTATCGTGTTTATATAAAGTTTGTTC
ATATAAAAAACACTTAACTAAAAAAAACGCGTATACGAGTTATGTTTTCC
AAAATACCTTGCTTTTTTTCATATTTTATTGTTTCGTCTTAGATTTTCAA
CTGTGTTGACACTTGGGATTTCGATGTGTTCAAGTTGGCCGAATATACTG
GAAATCGACCTCTCATGTCCATCACATACACCATATTACAGGTATAAATT
ACTTCCGAAAACTTTTATCATGAAAATAACCCCCCCCCCTATTTGAACCT
GTATTTATACTTACATGAATCCCCTTGCATTATCTTTTAATTTGAAAATT
TTTAAAAAATGTAATAATTATCATAATTAACTTGACGAGTTTTCTAGTGT
AGATAATATCGGATCGGATCTTTTTCCACAAAATCTTTAATTTTGACGAG
TTAATCCATGAAACAAGTCAACAACCTGATCATTCTTTTACAAATGACCA
AAAATAAAGCTATATTTGCCACCTTTGATCAGAGTTCTATTGAAAGTGGT
TCCCGCAAAGAAGCCTTTGCGGTGTTAAAAATTTACCTAACGTCAAACGG
CGCTACATCATCATAAGTATGCAAGGAAAAGTAGATCTAGCGCTGTCGTA
TCATTATTTCGCTGTTGAGTAGTGCTACCATTAGATCATTACTTTCAAAG
AAGTCACAATCAAACGGTTTTGGTTGTCCGTAGTTGATAAACTGTCTCCA
GGGTTTATAGAGAGTTGTAGCTGTGTATCTATAACGTTAATCTAACGTTG
AATGGACGTTCATGGACGTTCTTTTGACGTTTTGTAAGCAGCTGAAAAAC
CTTTTTCAACAAAGTTTTCTATCCTCCTTTTTTCTAGACACGTGATTTAC
TGAAGATGTTCAAAATCAAACCCTGGGTTTTCTCCAACTATATTACGTTG
GTTGAATCACATTATATCAAAGATATTCCATTTCATAATTCGACACACGC
TGCTGATGTTGTTCATGCGACTCACGTTCTCCTTTCGTCTGGTGCTTTTG
AGGTATGTTATCTATTCATTCTGGAGAGAAGAATCTCCTATTACGTTTTT
TGCCGGAAATTGAATTTTGATTGCAATCAAAGTTCAAGTTGCGTTATCAT
GATGTAAGGGATACATACACTACACAATGGTAAGTACCGGGAAAGATTGC
CACAATATATTGCCAGTTCCATTTGCAATTTTCCAACAATATAGAGGGTT
GTTTACAGGAAGAAAAACCCCTTTTCATAATAGAGTAGTTGTTGTTTACT
TCTTACATTGGGCCATTCCATTTTATATTCATACAGGGGGGGGGGGGGGG
GGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
GGGGGGGGGGGGGGTGGACAAACATTTTCCGGGAGTAATCCGAAAAAAAA
TTCCAGGAGGTATTTTTTCATTTTTCTAAGGGTGTAAGAAGTTATTCTAA
GATTTCCAGGGAATAGAAAATGATTTTACTTCGTCCACCCTCATTTTAAG
AGATATGAAAAGGTTTGGTTTTTAATGGAACAGCCCATAACAGTCCGTAA
ACTATATTTTTTAAAGCTCAGTGGTGGAAACCTGTTTTAACAGTATCACG
TATATATGGGAAATGTTGATATCATCTTATTGCATTATTTTGTATTTGGC
AATCTCATTCTTGTTTATAGGGCGTGTTCACTGACCTCGAGATTTTGGCA
GCTCTGATCGCGGCAGCAGTCCACGACGTCGACCATCCTGGAGTCAACAA
TAATTTCCTAGTCAACTCAAGTTCTGAAATGGCTTTACTTTATAACGACG
AATCAGTCCTCGAAAATCATCATTTAGCTGTAGCTTTCCAACTAATGCAA
GGTGAAAATTGTGATATTTTGGAAAGTTTTTCGAAGGCTGAACGACAACA
ATTTCGAAAAATGGTGATTGAAATGGTAAGAATGATTAAAGAAATTATTT
TTTGTAAAGGCACGCCTCTATGCTGACTTAGCAAAAAAAAACAATAGAAT
TTCTCAAAATCCCTAGAAATGGTGACATTTTTAAGATTTCACTTTCTCAT
GTTAAAACTCAGAGTTATAATCTTTACTTTCCAATCGTACTTTAAGGCAC
TTAGAAATCACTTGCGGTTTCAAAATTTTGAGGGAATTCCCCTTTTGTGC
CAAATATTACGGTGGGGATTGTAGTCTAGTATGCTAGACGACTTATTCAG
GCATAATTGGTGCCTAGGGACCAGAAAAACCGTTCGAGGAGAAGACATTT
GGTTGGTAGATGTTCAAACTACGAAGAGTCAACTTATCAACTCGACATTT
TCTTTTTCAGGTTTTAGCCACAGACAATGCGAAACACATGAACATCCTTG
GTTCTTTAAAAACTATGGTGGAAACAAAGAAACTAAGTGAGCAGTCCATG
AGACCAGTTCAACTTGAATCCACTAGTGAAAAAATGCATGTGTTGAAATG
TTTAGTACATTGTGCTGACTTAAGTAACCCTACGCGGCCGCTTCCGATGT
ACGAGACGTGGGTTGAAAGATTGATGGAAGAATTCTTCAGACAGGTAAGA
AAAATTTTTTTTAAGGTATCTCTAAAGTGTTATGAATCCATTGTGTACAT
ATTTTTAGCACCCCGCTTCGATAACGTCTTTCTATTGGTCTAAATTTGTG
GATGTTTTTGCGTCTAAACAACAGGAAGCCTTTGTAGAAGTGCTGTGTTC
CCGATTACCCATGATTCATTTCGACCATGAAATGGCTTATTTCTTATAAG
ATGGCGCTCGTTCGTGAAAAGCGATATCATTCAGAAACGTTATACACATG
AATTGGCAAAAACGTTGTCTCAACATCAATATGAACGTTGTTTTAACATA
CTGATCTATCTTTTCAGGGAGATGTGGAGCGCGATCGTAAAATGGAGATC
AGCCCGATGATGGACAGACACAACGCAAATATCGAGAAATCGCAGGTAAA
AATTAGCTGTCACCTTTTTTTATATTTTACAACTAGATGGAAAAATGACT
CAACAATAACCAGCTGCGTAGACAAGGAGTTGATATTTATTTGATAAAAC
TTTACAAACTTAGTGCTCAAAGTTGGATAACATAACATCCCAAGGTACTA
CTACAGACGTCAATATTTTCCACGAAAACTTTATCGAAGCTTTGAACTGT
CTATAAAAGCCGTTTTTTTATATTAGAACATCCAAAATTTTTAAAACCTT
CGGATGTTCTTAACTTTTTGAGATTCAAGCCTAAAAATGTTCTTAACATG
TTCTTATTTTGACCATTTTGTGAATATTTTTGACCATTTCCCTAAGAAAT
AGGTTTTTTTTTTAGTCCACAAAGCCTCAAAACGTTCTTAATTTGTTCTT
AACATTTTGGCCAGCGAAGCCTTATGTTCTTATAAAAAACGTGTACTAAG
ACGTTCAGCAATAGTTAAGAACTTTCCTGATGGTCAATATTATTTCTTTC
TTATTCTTTTTCATTTCTACAGGTCGTTTTCATCGATTACGTAGTTCATC
CGTTATGGGAAACTTGGGCTGATCTCGTTTACCCAGACGCTCAACCCATT
CTTAATAACTTACAAACTAATCGAGAATACTATCGGTCTCGATGCCCACA
AAGTCCTTCGAATACGCCCGCGGCAACGCCCAATAGTTCACCCTTCCCGC
CCAGGAAGAGTATGCCTGCTGCAGTCGATACTACTAAAACAAGTAAGTCA
AATTTTGGTCTGTTTTTGTTTCCTTGATTTTCTTTATACAAGATCAATGA
GGTTTGAAATTTATTTGTCTCTCTCTGACGATCTCATAGTTATGGGTGAA
TTTTTTCCAAGCTTGGTATGAATAGTCTTCAGATGTTACTTTTAATTTTC
TCTTGGTTATCGAGACAAATTCAAGCACGTAACTGAAAAACTGATACCAT
TAATTTCTGGGTCTTAAAAATTGGCTATACTATTAGTTTTTTTCCAAATC
GACATACATAATGTGACGGTGGCTCCCAAAGATATGATTTTTCTTTTATT
TTGACATCCATAGAAAACATCATTGCGGAACACCAAAAAAAAGCTAACCG
GAACTCTCTCGATTCGGATAGTAATACGGATACTGACGAGCCTTCTACAG
CGGATCGTGCGTTTCTTGTGCGGAACGATATCAAATTATTTCAAAACGAA
TCGAACGCGAATAATAATAACCCTAATTCGTATATGATTATTGACCGCCG
GCGTTCAGATACGGATGCTTTGAACGCTATGTCGGACGTTAAATTAGTAC
GTCAGAAATTATTAAAATATGCACACGTGAAATCACAAGATTCAACTGAT
ATTGACAATCACCAAGACTCGAAAAATCTTCACCAAACACAGAATAGTGT
TTTGAATAATAACACACGGACTACCAAGGAAATTGAGGATGGAACGGAAG
ATTTGAAGATCGAAGACGCTGAGTAGGGAAGATTTGATTTTCTGGGGATT
TTTCTGGAGTCGTTGGAGAAGGGCCGTTGAGTGCCGGGTATCAAGGTCCT
CGTTGTAAGCATGTGTACGTCTTTGATAGACCCTCAACGCACGATTTGTA
ACGTAATCGTTATATGATGTCATCGAAATGGTAGTGAGATTGAATCGTTC
TGTGATGAAAGAAACTGCTAGTCAGGTTGGTCAAATCTTCGTGAAATAAA
TTATCATAAATTATAGCATATATTATGCAAAAACGTCTTCAATGAGGGGA
CTTCTTTACATAAAGAAAAATCATGCGAAAAAGAAACATTTGAATCTCAC
AGCAATAAACATGGAGATGAAAAATCACGTTACAGCAAAACATCCTGGAA
ATGTTATCTGGCTTAGTTTTGCAAAATACACCAAAGCTTTTGGAACGCTA
AATTATGTCGTTAAAAGATATGGTTAAGAATGTCGAAATTTAGAAAATTT
ACATTAAATTATGAAAAAAGAAGAACAAAGAATATTGAGATGGTATATTT
TTGTTGGAGTAGAAACAAAAGGGTTTCTATAATTACATGGGAAGTCTTTA
TGAAGATATTAGAAACACAATTATTATATTTGTGGGTGAGAACTTTTTTA
TAATATTTTCTTTTATATATACTCACTCAACTCCAAACCCCCCTCTGGTT
CTTTTTAAATCTGAATGAAATATTGCATGTATAAATGACCATGCCAAAGG
CCACCAATTTTTCGCGCTCAACTTATAGCTTTTTCGGACATGCCATAAGT
TACACGAGCTAAGTGTCTTTCCATCTTACGCATAAAACACCGTTCTTTTT
TCCGGTTTTCTAAACGTACATTTTCCCCAAACTCAGAAATAAAGATTTGA
ATAGACATCTGGAAATTATTTTACGGAATTCAAACATTAGTAAAAAAAAT
CCGTAGCTCTGACTGCCATTTTGAAAAAACGAAGAAATCTCATCACCAGT
TTCACTTAATTTAAAGAATAAAGTTAAAGAATAAGTGCTAATAGACCTTT
TTATAAATTACGTCACGAACTTCACTTGTCTCGTATTCAAACAATTACCA
TGGTGATTATGTCCCTTGAGACATTAAATAATTTTTTTAAGAAAATAAAG
GAGTTGTAATAAAATCCGCTGTGAGTTAATCACCATGGCAATAAGCTCAA
AACGAGGAAGCGATGTTCGTGACGTAATTTATGAAAAGGTCTATTCATGA
TATTCATGATGTAATCTTTTATACGGAAGCACACAAAATAATCCGGAACT
AGTGGCAAAATTTGCCACTAGTCTTTTGTTATTTTGCCAGGTTTCCTGGT
TATCTCGGGTGCTTCCGTATAAAAGATTACGTCATGAATATCATGAATTT
GCTGTGCAAAATCCATTTGTTGTCTCATACGAAAAACTTTGCTTTTAGCA
CTGTCACTTTGTAATGGGAATTGCAATGAAGATGACCATTCCAGTCATGG
TTTTAAAGTTCGGTGATTATTCACCATTCCTCCTTTGTATAAAATTATCT
TAACTACATTTTTTCTAGTATTGGAAAGTAAAAAGTCAGTTGTTACATAC
TCAATTATATGATATTATATATTTAGTTTTAATTTATCCCAAAGATGTTT
TCACACCAAATTAAAAATATGTACAAAGTCATAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038660XLOC_038660Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061639-exon-scaffold_36-1575043694:60422..60531TCONS_00061639-exon-scaffold_36-1575043694:60422..60531Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:59054..59263TCONS_00061639-exon-scaffold_36-1575043694:59054..59263Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:58289..58585TCONS_00061639-exon-scaffold_36-1575043694:58289..58585Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:57592..57775TCONS_00061639-exon-scaffold_36-1575043694:57592..57775Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:56783..56943TCONS_00061639-exon-scaffold_36-1575043694:56783..56943Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:56391..56489TCONS_00061639-exon-scaffold_36-1575043694:56391..56489Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:55580..55744TCONS_00061639-exon-scaffold_36-1575043694:55580..55744Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:54607..54861TCONS_00061639-exon-scaffold_36-1575043694:54607..54861Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:53988..54221TCONS_00061639-exon-scaffold_36-1575043694:53988..54221Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:53587..53664TCONS_00061639-exon-scaffold_36-1575043694:53587..53664Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:52840..53059TCONS_00061639-exon-scaffold_36-1575043694:52840..53059Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1575043694:50445..52518TCONS_00061639-exon-scaffold_36-1575043694:50445..52518Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:60422..60531TCONS_00061639-exon-scaffold_36-1510915933:60422..60531Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:59054..59263TCONS_00061639-exon-scaffold_36-1510915933:59054..59263Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:58289..58585TCONS_00061639-exon-scaffold_36-1510915933:58289..58585Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:57592..57775TCONS_00061639-exon-scaffold_36-1510915933:57592..57775Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:56783..56943TCONS_00061639-exon-scaffold_36-1510915933:56783..56943Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:56391..56489TCONS_00061639-exon-scaffold_36-1510915933:56391..56489Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:55580..55744TCONS_00061639-exon-scaffold_36-1510915933:55580..55744Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:54607..54861TCONS_00061639-exon-scaffold_36-1510915933:54607..54861Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:53988..54221TCONS_00061639-exon-scaffold_36-1510915933:53988..54221Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:53587..53664TCONS_00061639-exon-scaffold_36-1510915933:53587..53664Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:52840..53059TCONS_00061639-exon-scaffold_36-1510915933:52840..53059Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1510915933:50445..52518TCONS_00061639-exon-scaffold_36-1510915933:50445..52518Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:60422..60531TCONS_00061639-exon-scaffold_36-1491911889:60422..60531Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:59054..59263TCONS_00061639-exon-scaffold_36-1491911889:59054..59263Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:58289..58585TCONS_00061639-exon-scaffold_36-1491911889:58289..58585Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:57592..57775TCONS_00061639-exon-scaffold_36-1491911889:57592..57775Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:56783..56943TCONS_00061639-exon-scaffold_36-1491911889:56783..56943Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:56391..56489TCONS_00061639-exon-scaffold_36-1491911889:56391..56489Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:55580..55744TCONS_00061639-exon-scaffold_36-1491911889:55580..55744Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:54607..54861TCONS_00061639-exon-scaffold_36-1491911889:54607..54861Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:53988..54221TCONS_00061639-exon-scaffold_36-1491911889:53988..54221Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:53587..53664TCONS_00061639-exon-scaffold_36-1491911889:53587..53664Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:52840..53059TCONS_00061639-exon-scaffold_36-1491911889:52840..53059Clytia hemisphaericaexon
TCONS_00061639-exon-scaffold_36-1491911889:50445..52518TCONS_00061639-exon-scaffold_36-1491911889:50445..52518Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:50445..60531 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.582118	0	1.63483e-05	0	0	3.00357e-10	1.42395e-07	1.79274	1.10616	0.611026	0.826714	5.96007	6.75383	2.20451	1.81424	3.29045	2.73465	7.12327	2.18376	2.63049	1.03978	1.91856	2.61466	1.46694e-08	0	0	1.88429	0	0
Blast
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BLAST of TCONS_00061639 vs. Swiss-Prot (Human)
Match: PDE4D (cAMP-specific 3',5'-cyclic phosphodiesterase 4D OS=Homo sapiens GN=PDE4D PE=1 SV=2)

HSP 1 Score: 528.094 bits (1359), Expect = 1.212e-168
Identity = 279/523 (53.35%), Postives = 374/523 (71.51%), Query Frame = 3 
Query:  393 RTANKYTXIHGDEL-VTPFAQVLSSLKSVRSNFVLLTNIRQNRLRRGSEGFHLNSRLCQLYEINDGSMIRDDMYKKLTMETLKEFDWCLDQLDTLRASMSISEMASNKFKRLLDRELKDFSETG--GSEISAWVFDNFVDKSLE----SLPNKDXXXXXXXXXXXXXXXXXXXXXXXCSGSVPRFGAECKDEETLEQIFNCVDTWDFDVFKLAEYTGNRPLMSITYTILQTRDLLKMFKIKPWVFSNYITLVESHYIKDIPFHNSTHAADVVHATHVLLSSGAFEGVFTDLEXXXXXXXXXXXXXXXPGVNNNFLVNSSSEMALLYNDESVLENHHLAVAFQLMQGENCDILESFSKAERQQFRKMVIEMVLATDNAKHMNILGSLKTMVETKKLSEQSMRPVQLESTSEKMHVLKCLVHCADLSNPTRPLPMYETWVERLMEEFFRQGDVERDRKMEISPMMDRHNANIEKSQVVFIDYVVHPLWETWADLVYPDAQPILNNLQTNREYYRSRCPQSPSNTP 1940
            R ++  + IHGD+L VTPFAQVL+SL++VR+NF  LTN++     +        S +C    IN  + I ++ Y+KL  ETL+E DWCLDQL+TL+   S+SEMASNKFKR+L+REL   SE    G+++S ++ + F+DK  E    S   K+  K +     +    K +  S   + S+PRFG + + E+ L +    V+ W   VF++AE +GNRPL  I +TI Q RDLLK FKI       Y+  +E HY  D+ +HN+ HAADVV +THVLLS+ A E VFTDLEILAA+ A+A+HDVDHPGV+N FL+N++SE+AL+YND SVLENHHLAV F+L+Q ENCDI ++ +K +RQ  RKMVI++VLATD +KHMN+L  LKTMVETKK++   +  + L++ S+++ VL+ +VHCADLSNPT+PL +Y  W +R+MEEFFRQGD ER+R MEISPM D+HNA++EKSQV FIDY+VHPLWETWADLV+PDAQ IL+ L+ NRE+Y+S  PQSPS  P
Sbjct:  208 RNSSIASDIHGDDLIVTPFAQVLASLRTVRNNFAALTNLQDRAPSK-------RSPMCNQPSINKAT-ITEEAYQKLASETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEFISNTFLDKQHEVEIPSPTQKEKEKKKRPMSQISGVKKLMHSSSLTNSSIPRFGVKTEQEDVLAKELEDVNKWGLHVFRIAELSGNRPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGV--LLLDNYSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCDKHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEDNREWYQSTIPQSPSPAP 720
The following BLAST results are available for this feature:
BLAST of TCONS_00061639 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDE4D1.212e-16853.35cAMP-specific 3',5'-cyclic phosphodiesterase 4D OS... [more]
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