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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061392 ID=TCONS_00061392|Name=TCONS_00061392|organism=Clytia hemisphaerica|type=transcript|length=1512bp
aaaaaataaaataaaaaatacaaaaataatcaatcagcgattcaaaaaat
attgttaattGCTCTAAAGATATAAGAAAACAATAATCGACttcttttca
ccaaaatagtGATTTTGGGTAACTCCACGGTATCGCCATTCTTCTGAATG
CTGTTCGTATACCACAAACTTCCCATTCTCAATACACTGGTCTCTTTGTT
TAGGAtgcaataaaaaagatttagcaTTTCTCAGTTCCTCTCTATTTGGA
TATTCCAAAACGAGACCGTTAAGAAGGTGATTGCCATAGACAACATTTCT
CCTTCTGGTAATAAGGTACAGAAGATCAGTTACTCCAATTATTTCTTTcc
tgataaaataaaaatttcttcctcCATGTTTCACTGACTTTGGTACTTCA
TTTTCCAACAATGCTGATATAGCCTCATACCAATCTTTATACGAAGTGAA
AAGATTTGATCCTGTTTCTATACCAAGAAAGTACTTATTAGCACCCCAGA
GCAGTTTATCTTCTTTAGTAGCGGCTGATGGCAGCTGAACAATTGGCAAA
TTTTCAGGCAACGGATCTTTCTTTAACTCATTTGAATTATTGGCTTCCAT
CGATTCAATTTTGTGACGAAGATTCTGTGTTGCcaattctttttctcttt
ccatCTGCCCTAGTTTAATCTTATTGTTGTTCTCTAAGTCCTTCATTTTC
AATGCAAACTCATTTTCCTTGACATTCATTTTGATTTGGTATTCATTTTC
TTTGGCAGCCATTTTGGTTTggtgttcattttccttggcAACCATTTTGG
TTTGGTGTTCATGCTCTTTCGCCAAAAATGCTTTCTCCATTTCATTGATT
TTCGTCTTGCGTTCATTTTCCTTGTTGGCGATTTCCTTGTCTTTTTCAGC
TAGTTTGTTCTGCAACTCATTCTGTTGCTTCAGCATTTCTTGATTGATTA
CACCTTTGTGTGAGTCCAACTCATTCGTTTTCTTCAACTTCAAGAGTTCC
AGCTCATGAGTTAACGATTGGTTGTCCTTTTCAAGCtgcaaaatcttcat
tttttgttcTTTGTCTTGGTTGGACATTTCCTTTTCCAACTCAAGAATTT
TGATGCGATTTTCCAATGTCAATTTTTGAATCTGTTTGTCATGGTTTTCT
TTAAGTTTTGCCGTCTCAACGACGCTATTGTCAACTTTGTTGGTGACATT
TCTACCGGTAGCACTGTGTGCCAAATTGCGATCATCACAATGTGCAGAtt
ccattttttgtttctttttttatctaCATGATAAAATAGTCATTAGCTTT
CAAATATCAATTTCTTGAAAACGACAAAGAACAATACTTTTGGAAATAGA
CAGTCCTGTCAATAGCTTCTagtcataaaaaatcacaaGACAGTTCAGGA
AGAAGTAGTCAATAATAGAAATCCATAGCCTGTATTAGCCAATACTTTTT
TCCATGTAAgcattcaataaatctaatgagagtctaaatttttttctcgt
gaaagaataaaa Run BLAST on NCBI transcript from alignment at scaffold_358:378430..379941+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061392 ID=TCONS_00061392|Name=TCONS_00061392|organism=Clytia hemisphaerica|type=transcript|length=1512bp|location=Sequence derived from alignment at scaffold_358:378430..379941+ (Clytia hemisphaerica)
aaaaaataaaataaaaaatacaaaaataatcaatcagcgattcaaaaaat
attgttaattGCTCTAAAGATATAAGAAAACAATAATCGACttcttttca
ccaaaatagtGATTTTGGGTAACTCCACGGTATCGCCATTCTTCTGAATG
CTGTTCGTATACCACAAACTTCCCATTCTCAATACACTGGTCTCTTTGTT
TAGGAtgcaataaaaaagatttagcaTTTCTCAGTTCCTCTCTATTTGGA
TATTCCAAAACGAGACCGTTAAGAAGGTGATTGCCATAGACAACATTTCT
CCTTCTGGTAATAAGGTACAGAAGATCAGTTACTCCAATTATTTCTTTcc
tgataaaataaaaatttcttcctcCATGTTTCACTGACTTTGGTACTTCA
TTTTCCAACAATGCTGATATAGCCTCATACCAATCTTTATACGAAGTGAA
AAGATTTGATCCTGTTTCTATACCAAGAAAGTACTTATTAGCACCCCAGA
GCAGTTTATCTTCTTTAGTAGCGGCTGATGGCAGCTGAACAATTGGCAAA
TTTTCAGGCAACGGATCTTTCTTTAACTCATTTGAATTATTGGCTTCCAT
CGATTCAATTTTGTGACGAAGATTCTGTGTTGCcaattctttttctcttt
ccatCTGCCCTAGTTTAATCTTATTGTTGTTCTCTAAGTCCTTCATTTTC
AATGCAAACTCATTTTCCTTGACATTCATTTTGATTTGGTATTCATTTTC
TTTGGCAGCCATTTTGGTTTggtgttcattttccttggcAACCATTTTGG
TTTGGTGTTCATGCTCTTTCGCCAAAAATGCTTTCTCCATTTCATTGATT
TTCGTCTTGCGTTCATTTTCCTTGTTGGCGATTTCCTTGTCTTTTTCAGC
TAGTTTGTTCTGCAACTCATTCTGTTGCTTCAGCATTTCTTGATTGATTA
CACCTTTGTGTGAGTCCAACTCATTCGTTTTCTTCAACTTCAAGAGTTCC
AGCTCATGAGTTAACGATTGGTTGTCCTTTTCAAGCtgcaaaatcttcat
tttttgttcTTTGTCTTGGTTGGACATTTCCTTTTCCAACTCAAGAATTT
TGATGCGATTTTCCAATGTCAATTTTTGAATCTGTTTGTCATGGTTTTCT
TTAAGTTTTGCCGTCTCAACGACGCTATTGTCAACTTTGTTGGTGACATT
TCTACCGGTAGCACTGTGTGCCAAATTGCGATCATCACAATGTGCAGAtt
ccattttttgtttctttttttatctaCATGATAAAATAGTCATTAGCTTT
CAAATATCAATTTCTTGAAAACGACAAAGAACAATACTTTTGGAAATAGA
CAGTCCTGTCAATAGCTTCTagtcataaaaaatcacaaGACAGTTCAGGA
AGAAGTAGTCAATAATAGAAATCCATAGCCTGTATTAGCCAATACTTTTT
TCCATGTAAgcattcaataaatctaatgagagtctaaatttttttctcgt
gaaagaataaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061392-exon-scaffold_358-1491911889:378430..379941 | TCONS_00061392-exon-scaffold_358-1491911889:378430..379941 | Clytia hemisphaerica | exon |
| TCONS_00061392-exon-scaffold_358-1510915933:378430..379941 | TCONS_00061392-exon-scaffold_358-1510915933:378430..379941 | Clytia hemisphaerica | exon |
| TCONS_00061392-exon-scaffold_358-1575043694:378430..379941 | TCONS_00061392-exon-scaffold_358-1575043694:378430..379941 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_358 | supercontig | scaffold_358:378430..379941 + |
Blast
The following BLAST results are available for this feature:
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