TCONS_00061296 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061296
Unique NameTCONS_00061296
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2054

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061296 ID=TCONS_00061296|Name=TCONS_00061296|organism=Clytia hemisphaerica|type=transcript|length=2054bp
CAGGTTTGACAGGGCAGGGTCACAGCAAGGGCATAAAATTCAGACAACAT
AAAAATAATGCCACATGATGGTAGGTAAACTTACAATTGAATCTGATAAA
AATACAGGGTCTGAAGTTATGAGAATTCctggtgtgagaaaaatgaACAG
ATGAAATGGTCTGTCTGTCTTTGTTTCCGCGTCGTCACTGGTTAGGCTCA
GTCGCTTAGGTCGGTTTGAAAGGTCCAGTTATACGGTCATGGTCTGGTCT
TTGAAGAAAAAGTCAATGGAAAGCATGGAAGAAGTTTTTAAAGGATTACG
AAGAAGTGAGTTGCGCTTGATATCTACTTCGGTCTTTCTCACTAAGAGTC
ATCGCTCAAACTCAtagtgaaatcgaaagtgaaagttacAGTTTCTTACA
TCACATACTGCTGATCATCactcaaaaaatcatcaaatgctTGAACAGAT
TTCATAACTCACAAAATCAACAATGGATAGTTCAACCGATGAAAGCAAGA
GACTTTCAATCAAAGTTTGGATTCTCTCATGCTTGTTTGGTATCGGCTCA
TGGGTTGTGATGAATGGTCTATGGGTTGAGCTACCAAACCTTGTCAATCA
ATTACCTGAAGGCTGGAAATTACCTTCTTACTTAACAATAATCGTGCAGA
TTGCTAATATTGGACCAATAAGCTATGGTTTACTCAAGAAATATTGTGTT
AAACCAGAGCGGAAAGAAACTCTTGAGCATATCACAATATGccttatttt
ggtttttggaaTAATAGGTGCCATCCTGTTAGCTTGTTACTggaaaaaaa
cttcaaacattTTTGGTGCTGAACATAGCACCTCTCTACTTTTATTAACA
TTTGTTATAGCTCTCGTTGACTGCACTTCATCTGTTACTTTTTTACCCTT
CATGTCcttgttaccagctttttacATGAGTCCTTTTTATGTTGGCGAAA
ACATGAGTTCCCTTGTTGCTGCTATATTTGGATTAGCACAAGGTGTGGAA
GTTTACAATGGTACTCTACCAAACGGACAGGGTAGAGAATTGTTGACACC
AGTGAGATATTCACAAAGTACATTTTTCTTAATTCTTGGTGTATTAATGA
TCCTTTGTTTTGCTTCATACTTGATTCTACGCCTATTCCCTTCAATTAAA
CAATTGCATATCAACAGTGATGAAGTTCAAGTTTCAACACATTATGACCG
GTTCCATACTTCAGTCTCTAGTGAATTCCAGGGCGATTCTTCAGATAACT
ACTTGGTCATTGGTGATACTGGTCATGATAGAAAGTTGATACAAGTCTGT
TTTTGTTGTATGACATGGTTGAATGTCTTACAGAACGGTGTTATGGCATC
TGTCGGCTCGTATGCTTATGGACCTTATGGGGAATTATCCTACCATTTTG
CGTCCACTCTTGGTCCCATCGTTGCTTCGATAAGTTGTTTCCTCTTCATG
TTCTTCCCAAGAAAATCAATACATTACGTCATTGGTGGATCTGTTGGTTA
CACTTTAGCTGTTATTTATTTACTCATAATGGCAACACTGAGCCCATACC
CCTTACTGTATGACAAAACATTTGGTAAAATTCTAATCGTCGTAGTGTGT
ATGGTGGCATCGTCCCTTGTGGCTTACACCAAGTTAGCTATTGCATCTGT
TATGAGAGATTTTGGTCACCAATACTTATTTTATACTGGGATTACAATGC
AACTTGGTTCGTTTATTGGTGCTGTTGTTATGTTCCCAATTGTCAATTAT
GCCAAAGTATTCAAATCATAATGGAATTAAAATGGAAAGTTGTTTCTTCT
TATTAGTAAttgtttgttctttattttaacTATGGTATTGGATTCTTGAA
GTGTTTTGATAATGGTCCCAATCCTTTGTtaatataccttaagggaactt
attttggagggaactaattttgacaagCGCCAAAAATcctgaagattttt
aattttggcgggaactaattttggcaaatgacagcctaaatctgttctat
tttgtcttatttaaagctttttttgtgaactcaAGAAGTTACTTAGGCTT
Agta
Run BLAST on NCBI

transcript from alignment at scaffold_355:119362..131115-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061296 ID=TCONS_00061296|Name=TCONS_00061296|organism=Clytia hemisphaerica|type=transcript|length=11754bp|location=Sequence derived from alignment at scaffold_355:119362..131115- (Clytia hemisphaerica)
CAGGTTTGACAGGGCAGGGTCACAGCAAGGGCATAAAATTCAGACAACAT
AAAAATAATGCCACATGATGGTAGGTAAACTTACAATTGAATCTGATAAA
AATACAGGGTCTGAAGTTATGAGAATTCCTGGTGTGAGAAAAATGAACAG
ATGAAATGGTCTGTCTGTCTTTGTTTCCGCGTCGTCACTGGTTAGGCTCA
GTCGCTTAGGTCGGTTTGAAAGGTCCAGTTATACGGTCATGGTCTGGTCT
TTGAAGAAAAAGTCAATGGAAAGCATGGAAGAAGTTTTTAAAGGATTACG
AAGAAGTGAGTTGCGCTTGATATCTACTTCGGTCTTTCTCACTAAGAGTC
ATCGCTCAAACTCATAGTGAAATCGAAAGTGAAAGTTACAGTTTCTTACA
TCACATACTGCTGATCATCACTCAAAAAATCATCAAATGCTTGGTAGGTA
AGTTATATTTCACGTTAGGATTCTGGTGACTCTAGTTTTTTTAATCCAAA
AATATTAAGTTAAGTTAAATTCTGTTTGTTCAGTGTCAGTCACTGATTAA
AATCAAAACAGGGACACAGCCAGCAAGATTTTTTCCCAAACCGCAAAAAC
TTTATGTTATTATGTTATGACGTACTTATGAAAGTCCTTGCCGTGAAATG
AAGTCGGGTAACTTACAAAAGACATACAAAAGAGACAATAAATCTGAAAA
AATTATCATTCTCTCTAAAAGTGACATTATCAAACAAATACCACTACCCA
GAGACTAAATTTTACATACATCAATACCATTTCACACAACATACTATTTT
TAATCCTTTTTCTTTTAGCGAAGTTAAATGGCTAACCTGATTCCTAACAT
TTTAAATGAATCCTCTATATGTCATGTCTGTCAAACTATTGTCCTTAACA
GTGGGGTTTTTTGTGAAATCTGTCTTACCTGGCTCCACATAAAATGCATC
AAAATCACCCAGAAGCATTACAAAAACTTAGCTAAATCACCTCTCCCTTA
CTTTTGTCAAAGATGTGTTTCTGGAGCTCTTCCTTTAACAACCATAACTG
ATTACCAATTAAAATTAGAATTTTTTAACTCAAATCACTCAGAACCTAAT
AACAACAAATGTAAACATTGCAATAAAGTCATTGGCCAAAAGAGACACGT
CAAGTGTAAACTTGGTGGTGGTCTCTTCCACTTAAAATGCTTAAATATAT
CTCCATTAAACATTAACCATAAATTATGGTCATGTAACGATTGTCTAAAC
TTTCCTTTTCAGCATATGGATGATAATATTTTTAACGAGTTTAACAACAA
TAATAAAGTTAATAATAACAATTCAACTTTCTCCACCAATGTTAATTTTA
CTAATGACTTCAAAGAATTTAACCATCTCCCTCAACTAAATATTACATTA
AATTCTTCTGACAATACTGATAACTTGATAAATTTTGAGTACTATGATAT
CAATAATTTTCTAACACTTTCCAGGGAGGCAGGTTCTTCCTACCTGTCTT
TCTTACATACCAACATAAGATCCCTAAATAAAAATGAAGGTAAGTTGAAA
CATTTACTAACCATTCTTCGTCATGAGTTTGATGTTGTAGGTATTTCGGA
AACATGGATCAAGGATGACCAACTATCAGAAAATCACTTAATCAATGGCT
ACCATCCTTACATTGGAATGTCTGGCTCAAGTCAAAACTCTGGAGTTGGT
TTTTTCATTAAAGACTCAATAAATTTCAAAGAAAGGGAAGACCTATCTTT
TTCAACAAAGGGTAAGAATCTTGACTTTGAATGTTTCTTTGTGGAGTTGG
ATGAAATATTGGTCGGTGTTGTCTATAGACATCCTAATAGCAGCATTCAG
CTTTTCACAAATGAACTTGAATCTCGAGTTTTAAATAAAATCAAAAAAGA
AAACAAAAAGATTGTACTGATGGGTGACTTCAACATTAATCTGATGAACA
CAGAGTCTCATAGATACACAGGTTATTTTTTTGACAAAATGACATCAAAT
TATCTCTTTCCATACATTGTACAACCTACAAGGTTCACTGAAAACAACCA
CACATTAATTGACAACATTTTCTATAACGATATTTCGAATGAATGTATTA
GTGGAAATCTTATCCCACACATCAGTGATCATTTGCCAAATTTTCTTTTA
ATTCCTCGCACACACAAAAATATTCCAAGGTCCAAAAAAAAACTCAAACG
TGATTACTCCAAATTTGACATAAATGAATTTCGAAAAGATCTTGAAAATA
TTGATTTTGTAAATACACTATCAAAATTGAACAACACCAATGATATGTAT
AACTTTTTTCACAATGGGTTAAAAATTTTATTCGATCTTCATGCTCCTAA
TAAACCTCTAACTAAAAACGAACGCAAGCTTGAACAAAACCCTTGGATGA
CTCAGAGTATTTTAAACAAAATGCAAATCAAAGACAATCTTTATGGACTT
TTCATGAAAGACAAAGACCCTCAAATTCTCAGAGAATATCAATTATTACT
ACACAATATCAACAAAAATATACGTAAACAAAAGTTTCTCCATCTAAAAC
AAAAATTTCTCTCTTCAAGAAATGACATTAAAAAGTTTTGGAAAAATCTT
AATTCTTATCTTGGCAGGAAAAACACAGTCAAAATACCAAGTACAATGAC
TAATGGAAAGAAATCTTTTTCTGGCTCATTCCAAATTGCTGAAGGCTTCA
ATGAATATTTTAGTGAGGTAGCTCCCAACTTATTAAAGAAAATTCCAAAT
CACCCTAATCCAGAAATTTACATGAACAAGATCAAAACATGTGATACAAG
CATTTTTTTTCAGAAAACAAATTCTTATGAAATTTTAACACATCTAAATA
ATCTCAATGCCGGCAAGGCAAAAGATATATATTCTTTTCCTGTTCGAATA
ATCAAAGCTATTGCAGATCTGATTTCGGAACCACTATCTCTTATAATAAA
TTCCTCGTTAGTCACAGGAGTATTTCCTAACCTCCTAAAACATGCCAAGG
TAACACCTCTATTTAAAAGTGGCATCAAAACGGACCTAAAAAATTATAGA
CCAATTTCAGTTCTCCCTGTGTTTGACAAAATATTTGAAAAAATCGTCCA
TGAAAGAGTTACTCAATTCTTCAAAAAACAAAACAGTTTATTTGAAAATC
AATTTGGCTTTCAGAAAGGTAAGTCCACCAACACCGCTGTTCTTCATTTA
ACCAATATCATCAGTCAATGCCTAAAAAGGAAGGAGATTGGTTGTGCAAT
CTTCTTAGATTTAGCTAAGGCCTTTGATACTGTAAATCATGAAATCCTTC
TAAAAAAACTAGACAAAATTGGAATTAGGGGCCCTGCCTTAGCCTGGTTC
AAAAGTTATCTAGAAAACCGAGTCCAGAGTGTCTGCTGCTACCAGGAAAA
ATCTAAGTCCCTTGGTATGGCTCATGGTGTTCCCCAAGGATCGGTACTAG
GACCCCTACTCTTTCTTATTTATGTAAACGATCTTCCTCTAAACTCGTCA
TTTTCCAAAACTCTATTTGCTGATGATACGTGTCTCTTAATGTCTCATAA
AGATCCTATTGTACTTGAAGAACTTGTCAACTCTGAACTTAAAATAATAA
GCGACTGGCTCGTTGCAAATAAGCTAACGCTAAACATTAGTAAATCTAAC
TATATACTTTTCAATAACATCAAACAAACTCAAGACTTTCAAATATCGAT
TTCAGGTCAGTTACTAAATCGTGTCACAGAAGCAAAATATCTTGGAGTCA
TTATCGACCACAAACTTAGTTGGAAGGAGCACTTAAAAAAGTTACACACA
AAGATCAAACAAAGTGTAGGTATTCTTCATAAGGTAGGTTGGTTCTTACC
TAGAAAAAATTTAATTTCTCTTTATTATAGTTTGATCTACTCCCATGTCA
CCTATTGTATTACTAGTTGGGGTTCTCCTAACACATCTGGTCTGTACAAA
ATTAATGAAGTCATTACTAAATGTTCTAAATATGTTGATCGGGTTTGCCC
ACAGTCTGCTGATAATGTTGAGAACTTTAAACCATTAAACATTCTAAATG
TCTATATTTTAGAATCCTGTAAACTCGTTCATAAATTTTTAAACAAAAAC
TTAACATCATCTTTAAATTCTCTATTTAAAAGATCTCCTGAAAGTAAACT
CCTACTCCAAAGGAAGAACTCCAAAAACAATATCTCCACTATACATCATA
ATCAAGCTCTACACCCTATGATGTATTATGCCCCTATCTTTTGGAACAAC
AAACAATGCTATAAATATGCGGAATCCTCATGCTCTGCTTTTTCATTGAA
ACTCAAAGATTCTCTAAAAAGCAATAATGACTGAAATATGTCTTCTTGCC
TTTCATAATTAATAAAACTTAGTTTAGATTTAAATATATATATTTTTTTT
CTTCTTCTTCTTCCTTTTCTCCTGCGTTTTTATAACTTGTACGTACTTTT
GCTTATACATAAAGGCTGTATTCTATATTCAAACCAACCTTGCAAAATCA
CCTAGCTAAAAAAGATAACGTAGATAATATATTATATCATCATTATTTAT
AACTGTAGCTAGTTTATACTGTGAATGGCTTTAGAAATCCTCTTAAAGGA
TATTTTTGTTCACAGTCCTTGTAAATATTTCATAGCTCATAAAGTCTATC
AAAGAAAACAATACAAAACAATACAATACAATGTAACTTGCATTCAGTGG
AGGGAAACTTGCATAGCCCTCAAATGAATGACCTGGCTGGTCATTAAAAT
ACAAAGTTAAATCAAAACAAAAATGGTAGAGTAGAGCAGTAGAGCCATAC
ATAGAGCTTCGAGCGTAGCTGCGTAGTTAATTTGTTTTGAAATTTTGCTG
CTTTGATGTGCTTTGATTGGTCAGTCCTTTGATGGCTATGCAAGTTTCCC
TCCACTGATGCAAGTCACCCGACTTCACGGTCCCTTGAATGAGAAAATGA
CGGGTCATTAATTGAAACTGAAAACTTGAAAAGGTATCTACCATTTTTAA
TATCAAAGATTTGGGCACTTTTTAAACAACAGCCATTCCACCGGAGAGGG
CTAGCTATACTCTCTAGTATCATCTTCATTTGGATTGAGTTTTTATTTCA
CATATATACCAACGTTTAGATTCCCTTTGACTTTTTGCTAAATTTCCCTC
TGCTTAGGAATTAAAATTTTTTTTAAATTAAAAACCCCCAAAAAATTGTA
AATATACCGTCTAAATCTGACACCACTGCCTAATTCCGACCCCCCAAATA
ACTGTTATGAAAAAAATTCTATATTTACAAACATTCCCTCTCCAAGTTGA
ACGATAAACTATTGCTAGAACTCTCGACACAAAACATCTAACAAGATAGC
TGTAATATCAAGATGTAAATTAATGTAATTAAAAAGTGTGAGTTGTAAAT
TGAATTGAATTGAATTGAATTGAATATATTTTCGCTGCAACACAGCAGGA
TAACCCCTTACAAAAAAAAAAAAAGATTTCTCTAATACAATGGGGAACCT
AGAAGAAACTGAGAAATTATTGCAGAACTAAGGGGACCCGTCCATATTCA
TTTGACAACGCAAAACGTCAAATTGACGTTATCCTCTGAACCCCCCACCC
CCCACAGATAACGTCAAGCGATGTACTGATATATACCAAAAGTTGTACAG
TAGCCATTTTTCACCAAAGTTTTCCCGTTCCGTCGCAAATTCCATACTTG
GTTGTACCCGTGCGTGTATGTGTTCTTTTAATTAATGACTTTTATTTAAA
AATAAATTAAAAGCTCCACTTGGCGCTAGGTCGGTGCCGTGCTTTAGGCG
TACCACCTTCTTTGCCCACTTGTGCGATGTGGTTTGCTCGATCGCGCAAA
CAATGAAAATATGATGTAATGATATCATAGCGCAAACCAATGGGATTATG
CGAGCAGCAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNTACACGAATA
TGTTTTCGAAAGCTTATAAAGTATAGTGTGGTTGGTGGTTACAAATATCC
GCGATTTTCACAAAAAGGTATACCTTTGATTTCTTATACCGTCAAACCTA
ACTTTTGAAAACCCCCCACCCCCTCATAACGTCAATTTGACGTTTTGCGT
TGTCAAATGAATATGGACGGCTCCCCTAAAGAAAAAATGAATAAATGATT
ATCATAATATTAATAGTGACAACAAAATAGTGAATATAAGAAACATTTTT
ACTTTTATTTTATGACAATTTCTTTGAGTAGATTTATCTATAAAGTTCTT
CCTGTTACACCACCCACCCCTCCCACCCTGGGAAAACACACTAAGTTCAC
GCACACACAATACACGCACACACAGACTCACACACACACAAAGATTTAAG
AAAAAATAATTACCTTTTATTCTGGATCAGTTGCTCATGTTTAAAACGAT
AACAGTTTTGTAATAAAAGTGACTTGTGCGGGAAAAATACGAAACAACTT
AGGCTGGTTTCCATCAAGAAACAAACAGATTAAATTGCAAAAATGGCGCG
AAGTTGAAAAAAGGGCGGATGCGGTAGCACTTGATTTGAATAAAAAACAT
TGAATCAATGAGGCGGCAACTATCAACGCCCTCTTTACCACCCATAAGTC
CGGATGTTTATTTACGGAAACCCCGCAATCAAGCCAAGTGCCAGTGTAAA
GTAATAAAAACCAGGCTTGATTACGTAACGTTTTAAAATGAGCGCGCTCG
TACACAGACCTCTTTTATATTTTCGTGTGCTTTGAAAGTAATAAAAACCA
GGCTTGATTACTGTATGTAACGTTTCAAAATGAGCACGCTCGTACACAGA
CCTCTTTTATATTTTCGTGTGCTTTGGAAAATCAAAACATCTCTAACAAC
TACTGTTGTCATTTATGACGTTGTGCATATTGCAATAAAAAAATATGTTT
TGTTATAAGAAGCAATTATTGTTATTTGGTTCAATTGGTTCAGTGTATCA
AATCTCTCAGTTTAGTTGACACTTTGGTATCTTCGTTGCGTCACAGCGAA
AGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCCATCGGATTTA
GGCAGTGGTGTCGGATTTAGGACCTCTCACAGTACTATACATGATTAACA
AAAATATTCTTCAATTTTTTCGATTTTATCGGTTTGAGTTATTTATTTAT
CATTACTTTTCTTTTTCTACAATGACAGATATTACTAATCTTTACTATAT
ATTAAATGATCTCTATGCACAAGTGTTACGCGTAAGCCAAATCGCGTAAT
ACGAACAACCTCTAAATTGCTGAGTACAGGAGAAAAAAAATCAGCCGCGG
CCAAGCCCACGCTGATAACTATCAAAAATCTTCGTTTTTCAATCAGCTAT
TGCAGCTCAAATAATCAATGAAATAATTTGAAATAAAAAGTAAACAAACC
TGGAACCTTTCATGAATTCAAAAAGAATAAAAGTATTCATCTAAAGTGAA
GATTACATTTCAAAATAAAACGATTTCCAAACCAACCTAAAGTCAGTGTC
TGCCAACTAAAAATTTCTCTGCGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCACGGGGTTTTGTT
TTTAAAAACAAACTTCAAAATAAAATTGTTAATGAACTTGTTACTTAAAA
TATCACTTACTTACATAATTTATTTATGATATACACCCCTTTCTTAAATA
AATGGCCTCTTAGATTCTTTTATGTTTGCCGCAAGAAGGGAGAAAAATTT
CATTTAACCCCCGGTTTTTCTCTCTTTTTCTATCTATTTCCCGCGTGTTA
GTATAGACACAACTTTAATTCAGGGAAATGAAGCGTTTTCATTGGTCTAA
AATCATGAATGGTCACGTGACCAGAATTTTTATCCAGGGAAATGCCGTGG
CGGCAATGTTTTGCTTTAGTGAGATTGACCATTTTGTTGTTTTGATTTGA
GCGGGCAAAATTTCTGTACAAACCAAAATATGGCTTCGTTGGAATACCGG
TTGAAACACTTGTGTATGACTGAGTCTGGGACTTCAGGTTTGAGTTGTTT
ATGCTTGTATGCCTTTTGATATGTTTGTTATTTGTGTAAATTTTTTTGTA
CTTGTCCCCATTTTGTATGTATTTTGATGAACGTGCAAAGGATTGTACGG
AAGTGTGTTTATCAGAAATTATTGCAATTAATTGTTTCTCCACTGTTACT
TTTTTTCTTTTATCACCTTCATTTGGATTAGGTTTTTCTTTCACAATCCA
ATGTTTAAATTCCCTTTTACTTTTTTTCTAAATTTCTCTCTGTTTTGGAA
TGATTTAAAAATTAAAATGCCAAAAAAATGGTAAATAAACATAATTAACG
AAAATATTTGTCACTTTTTTCGTTTTTATCTGTTTGAGCTATTTATATAT
CTATACTTTTCTCATTTCACAATGACAGATATTACATATCTTCACTACTG
TATAGCAAGCAAAAGGATGTGCTGCAAAACTTCTAGAAGAGGGTTTTATG
AAAAAATAAAGCAGTGGTTTTCAATGAAATTAACATTTTTGAATAACTTT
GAGGAATTATCTAAATTTTGAGCCATAAATGTAAAGATTTGACCAAATTC
AAACTTGTCCCAGTGTATCCTAGGCTTTATTCACATTACTTATGGATGCC
AGAGAATACCTTTTGGTGTAGATTACCCAAAACAATACGCCATAAAAAAT
CTGACGTTACAAAGATGAACTGCAATACAATGGTTTCAAAATCATACAAC
AAATAAAATCTGACATTTTGTTATTGAATTCGTAACCTTACACGTTTGAA
AATCAGACAACTGACGTTATCAGTAATCATAAAAAAACTGATAAAACGCA
GGGAACAAGGTTGACTCAAATTAATATAATAAACAACTTCTCAAAAAAAG
ATCCAGGGGGTGAGAAGACAACCACCTAGATCTGTGCACCATGGGTAGGC
TATTTCCTAAAAATTCTAACAGACCTCATACATTGACAAATTACACACCA
GGAATTTATTTTTATTTTAGCGTGTAATCAAGGCCTAATAAATTGAGGTA
GTTAGGGAACGTTTTTCTTCCTATTTATTAGCTACAAGTAAATCAATAAA
TAATAGAAAATACCTTATTGTCTTTAGAACAGATTTCATAACTCACAAAA
TCAACAATGGATAGTTCAACCGATGAAAGCAAGAGACTTTCAATCAAAGT
TTGGATTCTCTCATGCTTGTTTGGTATCGGCTCATGGGTTGTGATGAATG
GTCTATGGGTTGAGCTACCAAACCTTGTCAATCAATTACCTGAAGGCTGG
AAATTACCTTCTTACTTAACAATAATCGTGCAGATTGCTAATATTGGACC
AATAAGCTATGGTTTACTCAAGAAATATTGTGTTAAACCAGAGCGGAAAG
AAACTCTTGAGCATATCACAATATGCCTTATTTTGGTTTTTGGAATAATA
GGTGCCATCCTGTTAGCTTGTTACTGGAAAAAAACTTCAAACATTTTTGG
TGCTGAACATAGCACCTCTCTACTTTTATTAACATTTGTTATAGCTCTCG
TTGACTGCACTTCATCTGTTACTTTTTTACCCTTCATGTCCTTGTTACCA
GCTTTTTACATGAGTCCTTTTTATGTTGGCGAAAACATGAGTTCCCTTGT
TGCTGCTATATTTGGATTAGCACAAGGTGTGGAAGTTTACAATGGTACTC
TACCAAACGGACAGGGTAGAGAATTGTTGACACCAGTGAGATATTCACAA
AGTACATTTTTCTTAATTCTTGGTGTATTAATGATCCTTTGTTTTGCTTC
ATACTTGATTCTACGCCTATTCCCTTCAATTAAACAATTGCATATCAACA
GTGATGAAGTTCAAGTTTCAACACATTATGACCGGTTCCATACTTCAGTC
TCTAGTGAATTCCAGGGCGATTCTTCAGATAACTACTTGGTCATTGGTGA
TACTGGTCATGATAGAAAGTTGATACAAGTCTGTTTTTGTTGTATGACAT
GGTTGAATGTCTTACAGAACGGTGTTATGGCATCTGTCGGCTCGTATGCT
TATGGACCTTATGGGGAATTATCCTACCATTTTGGTAAGTTGATTTCTTT
TCATTTCAAAAATCATCCTCTGTTATAGAGGTTTTTCATTTTTTGTTAAG
TTACATGATTTCTGCCATTATGGAAGCAAACGTTCGATTTGCGAAAGGGA
TCGCCTCTGCGAATTCGAACGTTTGCTTCCATAATGGTGGAAATTACACA
ACTCAACAAACAATAAGAACCTCTATATGATAGTCTAGGAGCGATCTTGG
CAGACACAGGCAAATAGTATATCATATGGGCTTTTATTTATTTTCTCATT
ATGGTCCCTCGGTACCTCAAAACTAGTGGCAAAGCTGGAGAAAAATTTCT
AAGAAGCATTGAAGGGTGTCAGGTCATTTTAGCGCAGAGAACATTGAAAT
GTCAATTTTGAAGTACTATCAACTAGAGGTATAATTTCTAAGGTAACTAT
GGCTAGCTCTTGAGATGTTCCAATTTAAAATTTTGCTTATTCAGCGTTTT
TCTGCGTTTTTTGATGAGTCAACAGAATTTCAAATTCAAATATCTGGAGG
TTATGTATATTCATTTGATGTACTTTTTCGCCTTCAGCGTCCACTCTTGG
TCCCATCGTTGCTTCGATAAGTTGTTTCCTCTTCATGTTCTTCCCAAGAA
AATCAATACATTACGTCATTGGTGGATCTGTTGGTTACACTTTAGCTGTT
ATTTATTTACTCATAATGGCAACACTGAGCCCATACCCCTTACTGTATGA
CAAAACATTTGGTAAAATTCTAATCGTAAGTGTTCAGCATTATTTATTAT
ATTTTCTCCTTCAATGATTTTCTTCCAAAAAAATATCCCATTTGGATTGA
TTTGCAGAAAGAATCAGAAGTGCCGCTTTAAAGTCGAATGTTTTCTTCCA
CGATTCCACCTTTTCTGATAAATAAATTCTTTTAAACCTCCAAGTGTGTT
CAAATAATGTCAGAAGTTGTCAGAAGGGATAATTCCATGGCCCAGTTTGT
GCACAATAAATAATTCTTTATTTCACCTGTTACCTTAGGTCGTAGTGTGT
ATGGTGGCATCGTCCCTTGTGGCTTACACCAAGTTAGCTATTGCATCTGT
TATGAGAGATTTTGGTCACCAATACTTATTTTATACTGGGATTACAATGC
AACTTGGTTCGTTTATTGGTGCTGTTGTTATGTTCCCAATTGTCAATTAT
GCCAAAGTATTCAAATCATAATGGAATTAAAATGGAAAGTTGTTTCTTCT
TATTAGTAATTGTTTGTTCTTTATTTTAACTATGGTATTGGATTCTTGAA
GTGTTTTGATAATGGTCCCAATCCTTTGTTAATATACCTTAAGGGAACTT
ATTTTGGAGGGAACTAATTTTGACAAGCGCCAAAAATCCTGAAGATTTTT
AATTTTGGCGGGAACTAATTTTGGCAAATGACAGCCTAAATCTGTTCTAT
TTTGTCTTATTTAAAGCTTTTTTTGTGAACTCAAGAAGTTACTTAGGCTT
AGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038459XLOC_038459Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061296-exon-scaffold_355-1575043694:130673..131115TCONS_00061296-exon-scaffold_355-1575043694:130673..131115Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1575043694:120832..121788TCONS_00061296-exon-scaffold_355-1575043694:120832..121788Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1575043694:120091..120278TCONS_00061296-exon-scaffold_355-1575043694:120091..120278Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1575043694:119362..119827TCONS_00061296-exon-scaffold_355-1575043694:119362..119827Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1510915933:130673..131115TCONS_00061296-exon-scaffold_355-1510915933:130673..131115Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1510915933:120832..121788TCONS_00061296-exon-scaffold_355-1510915933:120832..121788Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1510915933:120091..120278TCONS_00061296-exon-scaffold_355-1510915933:120091..120278Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1510915933:119362..119827TCONS_00061296-exon-scaffold_355-1510915933:119362..119827Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1491911889:130673..131115TCONS_00061296-exon-scaffold_355-1491911889:130673..131115Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1491911889:120832..121788TCONS_00061296-exon-scaffold_355-1491911889:120832..121788Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1491911889:120091..120278TCONS_00061296-exon-scaffold_355-1491911889:120091..120278Clytia hemisphaericaexon
TCONS_00061296-exon-scaffold_355-1491911889:119362..119827TCONS_00061296-exon-scaffold_355-1491911889:119362..119827Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:119362..131115 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.435578	0.506758	0.428987	0.385104	1.64927	1.89725	1.89903	1.579	0.361805	0.518236	1.15291	0.33849	0.609754	0.335758	0.271887	0.649501	0.307984	0.72989	0.429987	0.379994	1.00936	0.54048	0.497364	1.37843	2.23738	2.16444	0.358945	0.254757	1.01283	0.491927
Blast
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BLAST of TCONS_00061296 vs. Swiss-Prot (Human)
Match: S52A3 (Solute carrier family 52, riboflavin transporter, member 3 OS=Homo sapiens GN=SLC52A3 PE=1 SV=4)

HSP 1 Score: 256.144 bits (653), Expect = 1.392e-76
Identity = 160/463 (34.56%), Postives = 243/463 (52.48%), Query Frame = 2 
Query:  521 ILSCLFGIGSWVVMNGLWVELPNLVNQLPEGWKLPSYLTIIVQIANIGPISYGLLKKYCVKPERKETLEHITICLILV-FGIIGAILLACYWKKTSNIFGAEHSTSLLLLTFVIALVDCTSSVTFLPFMSLLPAFYMSPFYVGENMSSLVAAIFGLAQG-------------------VEVYNGTLPNGQGRELLT-----------------PVRYSQSTFFLILGVLMILCFASYLILRLFPSIKQLHIN---SDEVQVSTHYDRFHTSVSSEFQGDSSDNYLVIGDTGHDRKLIQVC-------FCCMTWLNVLQNGVMASVGSYAYGPYGELSYHFASTLGPIVASISCFLFMFFPRKSIHYVIGGSVGYTLAVIYLLIMATLSPYPLLYDKTFGKILIVVVCMVASSLVAYTKLAIASVMRDFGHQYLFYTGITMQLGSFIGAVVMFPIVNYAKVFKS 1768
            +L C+FG+GSWV +NGLWVELP LV +LPEGW LPSYLT+++Q+ANIGP+   LL  +     R   L  + I   L+  G +  I+ A  W  TS +    HS + L+LTF +ALVDCTSSVTFLPFMS LP +Y++ F+VGE +S L+ A+  LAQG                   V      +  G  R L++                 P  +S   FFL+L ++M  C  ++ +L+  P   +  +    +D+V + +   R    +      DSS      G    + K    C       +  + ++N L NG++ SV +Y+   YG ++YH A+TL  +   ++  + MF P +S+ ++   SV  T    Y + MA +SP PLL     G++LIV   ++ S  ++Y K+ +  V+RD     L + G  +QLGS +GA++MFP+VN  ++F S
Sbjct:    7 LLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHHF-----RPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCTSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPVPTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFVLQRQPRCWEASVEDLLNDQVTLHSIRPREENDLGPAGTVDSSQ-----GQGYLEEKAAPCCPAHLAFIYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSS 459
The following BLAST results are available for this feature:
BLAST of TCONS_00061296 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S52A31.392e-7634.56Solute carrier family 52, riboflavin transporter, ... [more]
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