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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061247 ID=TCONS_00061247|Name=TCONS_00061247|organism=Clytia hemisphaerica|type=transcript|length=2064bp
CCGGCGCATAACAAAAGAATATTTAACGATATAATAAAACCTTAAATGCT
AAGAAACTGATTCACTATGTTCAATCGAGTCAAATAAGGAAAATTCAACT
TCTACAGCAACAAATTAAAATAAACttataaatcaaataaaatacCATGA
AAATAACAGGGAAGCATAACACGAGAGCTTCACAAATCAACAAGATTTCA
CCAAGGTTGTAATATAGTTTGTCTTGAAGCAAATCGACATTGTTGGTTAC
TGCCCAAAACatgttgaaaaatgtcaataatAGCAAAACTAAAATTGACA
CGATTTGAATAAAATTCAATTTCTCCTCCCTAAACGGCTTTTGCACAAAA
TCATGAAcagcaaaaataaagaaaagcaaACCCACTGGATACAATTTAAC
GATTGGTGACGAAATAAATGTTGTCATGACGATCAATAACAAGCGGCGTA
AAATCAAAACAGGTTCCCAGATGAGATGAGATTCTTGGTTTTTCAAACTC
AACTTGAAAGGTCCGTTTAACACACTCaatatttgatctttttcatcgaG
GGTGGCTTGGTCGAAAACGAAATGGTACTGGGTGAACGCCAGAGGGCGGA
TGACCATGAAATAAAGTGATAGGGGCGGTAAAGTAAGGATGAGAAGAAAC
TCGTTGGGCGAAATACGATATGATCTAAGGGCGCGGCAGCCAGTGTACAA
GACTAATGGGAAAGGTACCACCCAAAAACCAATCACAACCATGATAAGAT
ATTGCCAATCAGTATAACATTTGATGGAGGCTTGAACANATATGATCGAA
GGGCGCGGCAGCCAGTGTACAAGACTAACGGGAAAGGGACCACCCATAAA
CCAATCGCAACCATGATAAGATATTGCCAATCAGTATAACATTTGATTGA
GGCTTGAACGCGAAGATACGATTCGCCAGCAACCTCTACACAATGAATAT
TTCGTAAACAAAAAACTGAGATATTGGAATAACTGAGTAGCAAAACATTG
ACATATGCTCCTTTCAAACGACGTAAGAATGACTGCGGACGGACTTGAGA
GGTATTTCCATCCTTGAACCTCTTCTTTATAATGAAATTGACTGCAACAC
AGATAATCATTGCCAGTAAAAGAATTGCCAAACATGCTAACGATAAACTA
GATTTCAATGCATCCATAACAACCATACTATTTGTACACAAAGGACAAAT
TTTGATGAGACTGGAAGTGAAATCCAATTTGATATTGaagaatgtaaaca
aaaagCTGACAAAGTTTGGCATGTGATAATAAGTCTTTGCTGAAGCAACA
ACTCGAATGATGGAAGCGGTTTGGTAAAAAAAGAATGTGATTTTAATTAT
GCCAGGCAGTTGGTAGGATGGTGAGAGGTTTTTTCTAAACGGAGAACTCG
CAATCAATAGTTTGTTATTATCGTCGTTGTCCAGAAGTAATTCCTCGGTC
TCAAACAATTCTTTATTgacaacatttttatttttatttctcatGTAGTT
CCAAACGTCTTTGTTGAACAAGAAAAACAGACAAATCAAAGCAGCCATCA
ATATATATCCCAACCACACGGTCCATGAATATTCACAACACGATTTATCC
ATACATTCGTTGTGACCGAACAAAGATAAAACATGTCCTTTTTGGCAATC
ACCGCAAAGTCTCCCTTCCCGATTCCCAGCACAAGTGTTGTATGACTCGC
ACGTTTCCAAAGACGAGCAGCAATATAAAGGAGGACATGAATAGAATGTC
ACTTTACCAGAGCTGTCAGCTAATCCCCAGAAGTTGCCTTTACTTCGAAT
AATGCCGTCTTTGCAAGAGGCTTGATAGGGGCAAAGGTAACAAACAATAT
TATGCTGTTCAAGCGATGGTGAAGCTGTATcattgattcttataaaggCC
ACGTCGTTAGCGTTATAAGATGAACTATTACAGCTGACACAATCGAATCT
TAGGAATTgtctttttatataataatgCTTAAACTGTTTTCCATGTGGGC
ATACCAGCTTAGTATGTTCATCAAAGTAAACCCATGAAAGGCCACTTGTG
TAGTCATCAGTCTG Run BLAST on NCBI protein sequence of TCONS_00061247-protein >TCONS_00061247-protein ID=TCONS_00061247-protein|Name=TCONS_00061247-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
QTDDYTSGLSWVYFDEHTKLVCPHGKQFKHYYIKRQFLRFDCVSCNSSSY
NANDVAFIRINDTASPSLEQHNIVCYLCPYQASCKDGIIRSKGNFWGLAD
SSGKVTFYSCPPLYCCSSLETCESYNTCAGNREGRLCGDCQKGHVLSLFG
HNECMDKSCCEYSWTVWLGYILMAALICLFFLFNKDVWNYMRNKNKNVVN
KELFETEELLLDNDDNNKLLIASSPFRKNLSPSYQLPGIIKITFFFYQTA
SIIRVVASAKTYYHMPNFVSFLFTFFNIKLDFTSSLIKICPLCTNSMVVM
DALKSSLSLACLAILLLAMIICVAVNFIIKKRFKDGNTSQVRPQSFLRRL
KGAYVNVLLLSYSNISVFCLRNIHCVEVAGESYLRVQASIKCYTDWQYLI
MVAIGLWVVPFPLVLYTGCRALRSYXFKPPSNVILIGNILSWL Run BLAST on NCBI transcript from alignment at scaffold_354:584097..586160 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061247 ID=TCONS_00061247|Name=TCONS_00061247|organism=Clytia hemisphaerica|type=transcript|length=2064bp|location=Sequence derived from alignment at scaffold_354:584097..586160 (Clytia hemisphaerica)
CAGACTGATGACTACACAAGTGGCCTTTCATGGGTTTACTTTGATGAACA
TACTAAGCTGGTATGCCCACATGGAAAACAGTTTAAGcattattatataa
aaagacAATTCCTAAGATTCGATTGTGTCAGCTGTAATAGTTCATCTTAT
AACGCTAACGACGTGGcctttataagaatcaatgATACAGCTTCACCATC
GCTTGAACAGCATAATATTGTTTGTTACCTTTGCCCCTATCAAGCCTCTT
GCAAAGACGGCATTATTCGAAGTAAAGGCAACTTCTGGGGATTAGCTGAC
AGCTCTGGTAAAGTGACATTCTATTCATGTCCTCCTTTATATTGCTGCTC
GTCTTTGGAAACGTGCGAGTCATACAACACTTGTGCTGGGAATCGGGAAG
GGAGACTTTGCGGTGATTGCCAAAAAGGACATGTTTTATCTTTGTTCGGT
CACAACGAATGTATGGATAAATCGTGTTGTGAATATTCATGGACCGTGTG
GTTGGGATATATATTGATGGCTGCTTTGATTTGTCTGTTTTTCTTGTTCA
ACAAAGACGTTTGGAACTACatgagaaataaaaataaaaatgttgtcAAT
AAAGAATTGTTTGAGACCGAGGAATTACTTCTGGACAACGACGATAATAA
CAAACTATTGATTGCGAGTTCTCCGTTTAGAAAAAACCTCTCACCATCCT
ACCAACTGCCTGGCATAATTAAAATCACATTCTTTTTTTACCAAACCGCT
TCCATCATTCGAGTTGTTGCTTCAGCAAAGACTTATTATCACATGCCAAA
CTTTGTCAGctttttgtttacattcttCAATATCAAATTGGATTTCACTT
CCAGTCTCATCAAAATTTGTCCTTTGTGTACAAATAGTATGGTTGTTATG
GATGCATTGAAATCTAGTTTATCGTTAGCATGTTTGGCAATTCTTTTACT
GGCAATGATTATCTGTGTTGCAGTCAATTTCATTATAAAGAAGAGGTTCA
AGGATGGAAATACCTCTCAAGTCCGTCCGCAGTCATTCTTACGTCGTTTG
AAAGGAGCATATGTCAATGTTTTGCTACTCAGTTATTCCAATATCTCAGT
TTTTTGTTTACGAAATATTCATTGTGTAGAGGTTGCTGGCGAATCGTATC
TTCGCGTTCAAGCCTCAATCAAATGTTATACTGATTGGCAATATCTTATC
ATGGTTGCGATTGGTTTATGGGTGGTCCCTTTCCCGTTAGTCTTGTACAC
TGGCTGCCGCGCCCTTCGATCATATNTGTTCAAGCCTCCATCAAATGTTA
TACTGATTGGCAATATCTTATCATGGTTGTGATTGGTTTTTGGGTGGTAC
CTTTCCCATTAGTCTTGTACACTGGCTGCCGCGCCCTTAGATCATATCGT
ATTTCGCCCAACGAGTTTCTTCTCATCCTTACTTTACCGCCCCTATCACT
TTATTTCATGGTCATCCGCCCTCTGGCGTTCACCCAGTACCATTTCGTTT
TCGACCAAGCCACCCtcgatgaaaaagatcaaatattGAGTGTGTTAAAC
GGACCTTTCAAGTTGAGTTTGAAAAACCAAGAATCTCATCTCATCTGGGA
ACCTGTTTTGATTTTACGCCGCTTGTTATTGATCGTCATGACAACATTTA
TTTCGTCACCAATCGTTAAATTGTATCCAGTGGGTttgcttttctttatt
tttgctgTTCATGATTTTGTGCAAAAGCCGTTTAGGGAGGAGAAATTGAA
TTTTATTCAAATCGTGTCAATTTTAGTTTTGCTattattgacatttttca
acatGTTTTGGGCAGTAACCAACAATGTCGATTTGCTTCAAGACAAACTA
TATTACAACCTTGGTGAAATCTTGTTGATTTGTGAAGCTCTCGTGTTATG
CTTCCCTGTTATTTTCATGgtattttatttgatttataaGTTTATTTTAA
TTTGTTGCTGTAGAAGTTGAATTTTCCTTATTTGACTCGATTGAACATAG
TGAATCAGTTTCTTAGCATTTAAGGTTTTATTATATCGTTAAATATTCTT
TTGTTATGCGCCGG Coding sequence (CDS) from alignment at scaffold_354:584097..586160 >TCONS_00061247 ID=TCONS_00061247|Name=TCONS_00061247|organism=Clytia hemisphaerica|type=CDS|length=1332bp|location=Sequence derived from alignment at scaffold_354:584097..586160 (Clytia hemisphaerica)
CAGACTGATGACTACACAAGTGGCCTTTCATGGGTTTACTTTGATGAACA
TACTAAGCTGGTATGCCCACATGGAAAACAGTTTAAGcattattatataa
aaagacAATTCCTAAGATTCGATTGTGTCAGCTGTAATAGTTCATCTTAT
AACGCTAACGACGTGGcctttataagaatcaatgATACAGCTTCACCATC
GCTTGAACAGCATAATATTGTTTGTTACCTTTGCCCCTATCAAGCCTCTT
GCAAAGACGGCATTATTCGAAGTAAAGGCAACTTCTGGGGATTAGCTGAC
AGCTCTGGTAAAGTGACATTCTATTCATGTCCTCCTTTATATTGCTGCTC
GTCTTTGGAAACGTGCGAGTCATACAACACTTGTGCTGGGAATCGGGAAG
GGAGACTTTGCGGTGATTGCCAAAAAGGACATGTTTTATCTTTGTTCGGT
CACAACGAATGTATGGATAAATCGTGTTGTGAATATTCATGGACCGTGTG
GTTGGGATATATATTGATGGCTGCTTTGATTTGTCTGTTTTTCTTGTTCA
ACAAAGACGTTTGGAACTACatgagaaataaaaataaaaatgttgtcAAT
AAAGAATTGTTTGAGACCGAGGAATTACTTCTGGACAACGACGATAATAA
CAAACTATTGATTGCGAGTTCTCCGTTTAGAAAAAACCTCTCACCATCCT
ACCAACTGCCTGGCATAATTAAAATCACATTCTTTTTTTACCAAACCGCT
TCCATCATTCGAGTTGTTGCTTCAGCAAAGACTTATTATCACATGCCAAA
CTTTGTCAGctttttgtttacattcttCAATATCAAATTGGATTTCACTT
CCAGTCTCATCAAAATTTGTCCTTTGTGTACAAATAGTATGGTTGTTATG
GATGCATTGAAATCTAGTTTATCGTTAGCATGTTTGGCAATTCTTTTACT
GGCAATGATTATCTGTGTTGCAGTCAATTTCATTATAAAGAAGAGGTTCA
AGGATGGAAATACCTCTCAAGTCCGTCCGCAGTCATTCTTACGTCGTTTG
AAAGGAGCATATGTCAATGTTTTGCTACTCAGTTATTCCAATATCTCAGT
TTTTTGTTTACGAAATATTCATTGTGTAGAGGTTGCTGGCGAATCGTATC
TTCGCGTTCAAGCCTCAATCAAATGTTATACTGATTGGCAATATCTTATC
ATGGTTGCGATTGGTTTATGGGTGGTCCCTTTCCCGTTAGTCTTGTACAC
TGGCTGCCGCGCCCTTCGATCATATNTGTTCAAGCCTCCATCAAATGTTA
TACTGATTGGCAATATCTTATCATGGTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00061247-exon-scaffold_354-1491911889:584097..586160 | TCONS_00061247-exon-scaffold_354-1491911889:584097..586160 | Clytia hemisphaerica | exon |
| TCONS_00061247-exon-scaffold_354-1510915933:584097..586160 | TCONS_00061247-exon-scaffold_354-1510915933:584097..586160 | Clytia hemisphaerica | exon |
| TCONS_00061247-exon-scaffold_354-1575043694:584097..586160 | TCONS_00061247-exon-scaffold_354-1575043694:584097..586160 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| scaffold_354 | supercontig | scaffold_354:584097..586160 . |
Blast
The following BLAST results are available for this feature:
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