TCONS_00060892 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060892
Unique NameTCONS_00060892
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1793

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060892 ID=TCONS_00060892|Name=TCONS_00060892|organism=Clytia hemisphaerica|type=transcript|length=1793bp
AGATTTTCATTTGTGCATGAGAGTTGATCGGCACCTCTGATTATATGGTG
TGAATCATGAATAGCCTATGTTCGTTAATATTAGGGAGGTACAAATAGGA
ATGTAGTAAAATAgtgtattatttttctttcaatttagaaaaagaaaaca
aaaaacgaaaaacgaaaatattaaaattgaaTGCTGGTTAGCTGTTCACC
AATCCATATGTCGTCAACTTCAGATTCCAAAAAATCTTTCGGTTTCAAAT
CCAAACATCAAAAGACATTCAGGCCGAAAAAGAAATGGGATTCGGGAACA
TTGAAATATAACCTACACAAGAAAGCACAGGCATCATTGAAAGCGGGTAT
AGATTTAAGGGAAGCAGTTGCATTGCCGTGTGACGAAGATTTGAATGACT
GGTTGGCTGTACATGtgGTGGATTTTTATAACAGAATCAATTTAATATAC
GGAACGATACAAGAGGAATGCACGAACGACAGTTGTCCTGTCATGTCCGG
CGGTCCTAAATATGAATATTATTGGGCAGACGgcgaaaaatataaaaaac
cgACAGCCGTTCCGGCACCGGTATACGTGACGTTATTGATGGATTGGGTG
GACAATCAAGTTAATGATGAACATTTATTCCCTCCTTCTGCAGatATACC
TTTTCCAAAGAACTTTCAACCCATtgtcaaaaatatattcaaaagaCTAT
TTCGTGTTTTCGTACACGTCTATATACACCACTTCGATAAAATTATAACT
CTCGGCGCCGAAGCGCATATAAATCAATGCTAcaaacatttttatcattt
tgtgacGGCGTTTAATCTCATCGAAAAACGAGAACTAAACCCACTGAAGG
ACATGACGATGCAGTTATGTAGTTGAGGTTTGGGGTGTGGCGTGGTCTGG
GTTTGGTTGTCAGGttgtatatttttatgaaaattttccattttttgtaa
attataGTTTAAATATCTTTTATATAGAAATTTTATGAACATGTCATTTT
AGCAAGAAAGTTTAATTTTATTGAGGACGTTTTACCGTAATAAGTATTTT
TGTGATTAGTCGGTTGACGATAGTTTCTAGCCAAGGATAACCTTCTACTA
GAtcgtaagtaagtttgcgaccgcagtcgagggcgacccgaaggctccct
tttcgtataactgtctacccgaaggtaggggagggcgctactcctttccc
tggattgctccacttaccctcgatccatctctttagttgctgagcatcaa
gcagagaggcatcaagtaccattttgggaatctttggtatgacccggctg
gggatcgaacccacaaccttgtgcaccgtagctggatgctctacctgcAT
GCTACTAGATCGTAACAAAGTCGAGAACAACTGAAATCCATCTGAAACTG
ATAATCGAGTCCGAAATGATAATCGAGTCCGAAATTGATAAGTTTTATAG
TTCATTCACCAATTATTACGTTTTTCGTTTTCCATTCGTAAACAAGCAAG
ATATTATTGTCAAACCATTTTTCTGTGCTGTGACACTACCAAAGAACCTG
CTATTAgtagcactgacctttatatagcCAATgggaccaagctatatctg
ccatctttaattgaaatgttttttgaagtggtacccgcaaagaagccatt
gtaatGTTATAAATTAACGTTTAAGGGCGCTACATCATCAGGAGGtcttc
attaaaatgaagattctgacttgtagatttatcagaattaaacgattttt
gtttattttgaaagaatgatggttatacttaaaaatgagcatg
Run BLAST on NCBI

protein sequence of TCONS_00060892-protein

>TCONS_00060892-protein ID=TCONS_00060892-protein|Name=TCONS_00060892-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
MLVSCSPIHMSSTSDSKKSFGFKSKHQKTFRPKKKWDSGTLKYNLHKKAQ
ASLKAGIDLREAVALPCDEDLNDWLAVHVVDFYNRINLIYGTIQEECTND
SCPVMSGGPKYEYYWADGEKYKKPTAVPAPVYVTLLMDWVDNQVNDEHLF
PPSADIPFPKNFQPIVKNIFKRLFRVFVHVYIHHFDKIITLGAEAHINQC
YKHFYHFVTAFNLIEKRELNPLKDMTMQLCS
Run BLAST on NCBI

transcript from alignment at scaffold_349:749677..756689-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060892 ID=TCONS_00060892|Name=TCONS_00060892|organism=Clytia hemisphaerica|type=transcript|length=7013bp|location=Sequence derived from alignment at scaffold_349:749677..756689- (Clytia hemisphaerica)
AGATTTTCATTTGTGCATGAGAGTTGATCGGCACCTCTGATTATATGGTG
TGAATCATGAATAGCCTATGTTCGTTAATATTAGGGAGGTACAAATAGGA
ATGTAGTAAAATAGTGTATTATTTTTCTTTCAATTTAGAAAAAGAAAACA
AAAAACGAAAAACGAAAATATTAAAATTGAATGCTGGTTAGCTGTTCACC
AATCCATATGTCGTCAACTTCAGATTCCAAAAAATCTTTCGGTTTCAAAT
CCAAACATCAAAAGGTATTATTTTGGTTTTTCTTTTTCTTAGACCATGTT
CAAAGATACGGTTCCGTTCCCTCCCGGTATGATTTTCGTTACAGATCGAG
TTCGTGTTCATATTGGTTTCGGAACGTTTCGGAACAAGAAAACTGAGGAG
TTCCGTTCCGATGAAAAAAAAGAAAAGAAACTGTTTCGATCTGTTTTGCT
TTGTAACGTCTTCTTTTTTGACCTTTCCAATTTTGACGTTCACACAGTGT
TTCGGAACCTTTTCGTTTCGGAGCGAAACGGAACATAGCGTGTGAACGTG
GTCTAAATGCTTCGTTGTCTAAGGTATCGATATGTTTAAACTTAAATTCC
TGTTATTTATGTTGGCTTTGAAGATGCCGATAACTTCTGGTTCTTTCAGA
GGCCCTGGGAACAGCCTATGCAGCCTCACTTTCTTAAATGACACAAATTT
TCTTTTTTGCTAGCACAAAACAATACACCTTTTCGACCGTAGTCGCGCGG
TCAGACGCAAAAAAAAGACTGGAACGGTTTTAGAGTGGTAAAACGGACAA
AGATATACCTGCGCGGCAATTGTCGGCTACGGTCGAAAAGGTGTATTTTG
TCTGAATCGCAGACCTCTATAGATATACTTACTTTATAAGAAACTTTTTT
TGCTAGAATATGAGAAGAAGCCTTGGAACAATCAAAATACATCCCGGAAA
TCCAGCAAAACTACTTTCACTTTCATTGAACTTTTAACTTTGAAAGTGAT
TTTTTCGGTCACATCATATTTCTTCCCACCTATGATATCCTTAAATCCTG
ATTGAAATGTATTACAGTAGAGTCTCTTGAACTCGAACCTCTATAACTCG
AACAAGTATTCTCACCCTTTAGTTAACAATGCCTTATATGCCTCGAAATC
TACTTAACTTGAAAACTTGAACAAAATTTGTGTTCCCCACGTGCGTTTTC
GAGCTATGGAGACTCAACTGTATCGAAGTTCCTTCGGCTAACAATGTCTT
ATAAACCTTACTCCATAACTCGAAATGTCCTTAATTCGAACTAATTTTGT
GTTCCCCACCTGCGTGTTCGAGTTATGAAGCCTCAACTGTTATTGTTCTT
TCTTTAGACATTCAGGCCGAAAAAGAAATGGGATTCGGGAACATTGAAAT
ATAACCTACACAAGAAAGCACAGGTAAAAGATCTCTCACTGCACCGTCCT
TCCCTTTGACTGTTTGTTACGACCCTGTATCCAATGGATCTGGCATAATA
CTAGTAGTAGTTACACCCTGGCAAAAACATGGTGCATCCAAAATAACAAG
ATTGAAATTTCAAAATTTTGGAATCGTAAAAAATATGTATGGAAATTTTG
TCTGTAAAGATCTTTGAAAAGTGTTTGAAACCCTAACAACACACCTATGC
AGTTAGCCTGGGTACAGGTCACAGACGAAAAGCAATGTTTTCCTAAAATT
TCAGTCCTTTGAACTTTTTGAGTTGAATTTTTTTCCTTCAAACTCATCAG
AGTAGCCAGAACGATAATGGGCCATCATTTTATATCCATACAGGGGGTGG
ACGAACATTTCCAGAGGGTAACCTGAGAAAGATTTCCAAATTTATTTTTT
CATTTTTCCAATGGGAGTAAAAAGTTATTCTTAAATTTACAGGGGGTAAA
AACTGTTTTTAGTTCATGCACCCTCACTTTAAGGTATGAATTTTTTTCTT
CACAAGGTTTTTTTGGAAATTTTACCATTTCCGAGGGGATATCCACGCAT
TTTCAATAATTGTTTGTTGCCTTGAAAAGGTTCGTCCACCCCCTGTATGT
TTTTAATGGAACAGCCCAATGTATCATCATTTATCTTAACAGAGATATAT
CTAAGCAAGATTCAGGTGTTTCAAAGTTTAGTTGAGATATCTTTCCATCT
AATTTAACAGAGTAGCCAGAACGATAATTTTTGATCATGTTTCGCATTAC
AGGCATCATTGAAAGCGGGTATAGATTTAAGGGAAGCAGTTGCATTGCCG
TGTGACGAAGATTTGAATGACTGGTTGGCTGTACATGGTATGTAATTGAT
CATGATTTAAAAGGTTTCTGAAGTTAAGGTCATAGAACTTAAACCCTTCA
TCGGTTTCGTTTTGTTTTTATTCATGATATGCACCACTGCAACGACTTCA
CGAAATTTTGCAACTTTTCTGTTTTTGTTCCACCCTAACGTCACTTTTTC
TATTGTTTAAGTGACGTATTGGGTGGAAAATTCTCAGAAGACTCTCCGGT
GAATATGCTATGCGAAGCAGACCTGCCATACTGATTTGATGGCAGGTCTG
TTCTGGTGTGCATAGCTACGTGAATTTGGCCACGTTTGTGAATCCTTGTG
AGAAATTTTCGAGTTGTTTCAGGCGATAAGCTTGGAAGGCTAGTGGAATT
GAGAACATAGAATTTATATCTAACAAATCAGAATGCGGGAAATGGTCCAA
AGAGGGGAGGATGCCCTTGTTCAGTTGTCCTTAAAACGACCTCGGTTTAG
TTTTTGTTTATTCTCGGAGATTACAATTTAAGAACCTTCATGCAATCACT
TTTCCATGATGGTGTCTATAAATTAGCAATTTAGTCTTGTTTCCGGCTTT
ACATACACATTCAATTTATGAAACATTTTTTTAATTTTTTTCTAGTGGTG
GATTTTTATAACAGAATCAATTTAATATACGGAACGATACAAGAGGAATG
CACGAACGACAGTTGTCCTGTCATGTCCGGCGGTCCTAAGTAAGTTTGTA
TTTTCCATGTTTATATCTGGAGGCGGTATCTTTACGTAAATAGCTGAGAA
ACAACAGTCTATCGATCCTTTTGACGGGGCTCATGGCTAGCTGACCTGTG
CTTTGGAAGAAGCGGGGGTTCGGACCGGGGACCCTGGTCTATGGCGCTTA
CACCGTACACAATTCGGCAATTGCCCCTAATAAGGAGACGTCGGGAAGCG
GTAAAAGTATATGGTTGACGGTTTGCGTACTCTTGTATACCAAATCCGTA
AGAGGATCAAAACTTGTAAGTAGAAACGGTGAAAGGTTAGAAACATAAGT
TTGGTACTTGCCGTTAATTACACAGATGTTGAGGGGAAAGGCACTCTGAG
CACTTGTCTTAACATTCTTCTTTTTCTGTTTTTCACAGATATGAATATTA
TTGGGCAGACGGCGAAAAATATAAAAAACCGACAGCCGTTCCGGCACCGG
TATACGTGACGTTATTGATGGATTGGGTGGACAATCAAGTTAATGATGAA
CATTTATTCCCTCCTTCTGCAGGTTAGAAAGTCTTTATTAATTTTTGTTG
TTTGTTCTTTCCTTTCGCCTTCTTGTTAAGCTGACGGGTGACTCTAGAGT
GGCAGGAGATGCTTACTCAAGGTACAGCACCTAATCTCAGACTTCGGTCT
TCAGCTTATCACTTCCTTATGTGCCTTGTGCATTCCTTTTGTTTTCTACA
GATTGTCATGGTTATTAGTCGCTAGTTTGTATCTTCTTCAGTGTATATAA
CTTATCACTATATTCCTTAGTACCTAGGCTTATTTAATTTTCCTTGGATT
GTTCATTCGGCTATTAAATAGTGTTTTTTTTCATTCATGGCCCCTTTCGT
GCACTAAACCTGTCAAAAATTTAACCAATTAAATAGCAGTTTATGGTGTT
TATCAAGCATGGTGGGCGACAATTTTTTTCTCCCGAAATTTATGGCCTCT
CACTTCAAACGGTACTCCGGGGTCCATGTCATTCGTCTCTATGCTGGCTC
GAGTTTAAATGCCACAAACCCTTTTTTGGCTTGATTATAGTTATTTTTTT
AACGAAGGATGGATTAATAGCTAAATGTACCATTTCACTTCACTTTTTGA
CACTGATTTAACAGCCTACGATTTGGGACGTTCTCGACAGAACCTTGGAA
CAGTCCTTTTACTCTCCAACCTTGAAATACTCAAACGTATCACCATACAA
GAATTTTTTAATTTTTTAATTTCATTTCATTTCAGATATACCTTTTCCAA
AGAACTTTCAACCCATTGTCAAAAATATATTCAAAAGACTATTTCGTGTT
TTCGTACACGTCTATATACACCACTTCGATAAAATTATAACTCTCGGCGC
CGTAAGTTTATTTGTTCTTTTAATTCTTAGATCTTAAGCCCACTTAGAGC
TTTTTTTATAAGCTGAATGGTGCGATTTTCAAGTGGCCCGGTAGTATATG
GTAATATGCTTTATTTTAGGCGGACTGTAAAACATTTTAGTTGCTTTTTG
AAGTTAAAAAAAGGATGAAACAAGGTTTTATTTGAGAATAAGGGAATGCA
AATCTGAAAGTCCAGTCAGAAGTAGATTAAACTAAGATGATTATATAATT
TCACTGTAGTATTTGTATCTCAAATTAATACCACTGCAGTTACCCCTAGT
TACCCCCCCCTCCCAGGTTCAGAATGGCGTATTTTCGGCCGCGCGGCGAA
TACTGGCGGACGCAAGTAGAAAGTTCACAAGAATGAATCTCTAAAGCATA
GAGTGCACCATCCCCTGAGTTTAGAGGGGGTTAACCACTTTTGCTTCATT
GAGGTTGTTTTTTTATTCTGGAGGCTAGCTTGCTAGGAGGGGTGGCTGAG
TGTTGAGTAATAGAACTGGGGGTAGAGCTGTTAGGTTACAAATATCTTTA
AATTATGTTAAAATCTATGCTGTGGGGAAGGTTTTGACCCCCTCTGCGGC
GCGATAAATTTACTGACAATTTCCATGAAAAGTTTCGTCGAGATTTTGCT
ATCTTCCTTAGCCCCTCCTGAAATATGCTAGGGGCTGGACCCCTCTGCAT
CTTATATATGTCATGGACTATTGTAAACTCTTCTTCTTTCCTTTGATTTC
AGGAAGCGCATATAAATCAATGCTACAAACATTTTTATCATTTTGTGACG
GCGTTTAATCTCATCGAAAAACGAGAACTAAACCCACTGGTAAGCAATCA
TTTTTTCGCGCCATGATAGCGAGGTTATATATTGGGCTATTCCAGAAAAA
ATTGTACTCCCAATGTTGATGAGGGAAAGGTTACCCACTGGATTTTTTCA
ATTTTTAGGACCCCTTTATATTTTTTTCTAATTTTTAGGACAATCTTGAA
TTTTTGACCTCGTTTTACTAACCACCTTGATTTTCAACCTCATTTTTACT
GACCACCCTGGAAAACCAGACCCCCTGGATTTTTTTATTTTCAAGACCAC
CCTGGACCTTCAACATAGGGTACAGACTGTTTCAGTGATAGCCCAATTGC
ACTTTTGAGGACGGCCAAGTTACTGAAACGGTTTGGAAAAACCTGCGTAA
CCACATATATCTTATATAAAACACTAGTTAGAGCTACTTAGTCCGCCAAA
TAATCCGCCATCTTTGCTGAAAGTAAACTGCAGTAGACTACGATTCGGTG
CTCCCAATTTGATCTATCAAAACCATGGTCTCGCAGGTTATTCGTATTGA
TTGAACAAATTGTCTACCTTCAGCAAAGATGGCGGATTATTTTGCTTTAA
CTGTCGTTGCTTGGGAAATACACAAGTATATTATCCATTGTGTTATATAA
ATATCTCTTTTTGACTCTACCAGTTGATCTAGAAAAATCAGAATTTAACT
ATATCTAGTTCATAATCAAATCGTAGATCAAATTTGACATTTCAAGTTTC
GAGCTTCTTGCTTATGTATGACTATTACCTTTTCTTCAAAAAAATAATAA
AATACAAAATTAACCTTAGGCCCTAGAAGAAAATTGGGACAATTTTTGGG
AAAGCTGCAGAATTTGAAATACTGAATTCATTTATTAGAATTTTCTAATC
TTTTTCTCGTTCACAGAAGGACATGACGATGCAGTTATGTAGTTGAGGTT
TGGGGTGTGGCGTGGTCTGGGTTTGGTTGTCAGGTTGTATATTTTTATGA
AAATTTTCCATTTTTTGTAAATTATAGTTTAAATATCTTTTATATAGAAA
TTTTATGAACATGTCATTTTAGCAAGAAAGTTTAATTTTATTGAGGACGT
TTTACCGTAATAAGTATTTTTGTGATTAGTCGGTTGACGATAGTTTCTAG
CCAAGGATAACCTTCTACTAGATCGTAAGTAAGTTTGCGACCGCAGTCGA
GGGCGACCCGAAGGCTCCCTTTTCGTATAACTGTCTACCCGAAGGTAGGG
GAGGGCGCTACTCCTTTCCCTGGATTGCTCCACTTACCCTCGATCCATCT
CTTTAGTTGCTGAGCATCAAGCAGAGAGGCATCAAGTACCATTTTGGGAA
TCTTTGGTATGACCCGGCTGGGGATCGAACCCACAACCTTGTGCACCGTA
GCTGGATGCTCTACCTGCATGCTACTAGATCGTAACAAAGTCGAGAACAA
CTGAAATCCATCTGAAACTGATAATCGAGTCCGAAATGATAATCGAGTCC
GAAATTGATAAGTTTTATAGTTCATTCACCAATTATTACGTTTTTCGTTT
TCCATTCGTAAACAAGCAAGATATTATTGTCAAACCATTTTTCTGTGCTG
TGACACTACCAAAGAACCTGCTATTAGTAGCACTGACCTTTATATAGCCA
ATGGGACCAAGCTATATCTGCCATCTTTAATTGAAATGTTTTTTGAAGTG
GTACCCGCAAAGAAGCCATTGTAATGTTATAAATTAACGTTTAAGGGCGC
TACATCATCAGGAGGTCTTCATTAAAATGAAGATTCTGACTTGTAGATTT
ATCAGAATTAAACGATTTTTGTTTATTTTGAAAGAATGATGGTTATACTT
AAAAATGAGCATG

Coding sequence (CDS) from alignment at scaffold_349:749677..756689-

>TCONS_00060892 ID=TCONS_00060892|Name=TCONS_00060892|organism=Clytia hemisphaerica|type=CDS|length=5568bp|location=Sequence derived from alignment at scaffold_349:749677..756689- (Clytia hemisphaerica)
AAGGACATGACGATGCAGTTATGTAGTTGAGAAGCGCATATAAATCAATG
CTACAAACATTTTTATCATTTTGTGACGGCGTTTAATCTCATCGAAAAAC
GAGAACTAAACCCACTGATATACCTTTTCCAAAGAACTTTCAACCCATTG
TCAAAAATATATTCAAAAGACTATTTCGTGTTTTCGTACACGTCTATATA
CACCACTTCGATAAAATTATAACTCTCGGCGCCATATGAATATTATTGGG
CAGACGGCGAAAAATATAAAAAACCGACAGCCGTTCCGGCACCGGTATAC
GTGACGTTATTGATGGATTGGGTGGACAATCAAGTTAATGATGAACATTT
ATTCCCTCCTTCTGCAGTGGTGGATTTTTATAACAGAATCAATTTAATAT
ACGGAACGATACAAGAGGAATGCACGAACGACAGTTGTCCTGTCATGTCC
GGCGGTCCTAAGCATCATTGAAAGCGGGTATAGATTTAAGGGAAGCAGTT
GCATTGCCGTGTGACGAAGATTTGAATGACTGGTTGGCTGTACATGACAT
TCAGGCCGAAAAAGAAATGGGATTCGGGAACATTGAAATATAACCTACAC
AAGAAAGCACAGATGCTGGTTAGCTGTTCACCAATCCATATGTCGTCAAC
TTCAGATTCCAAAAAATCTTTCGGTTTCAAATCCAAACATCAAAAGAAGG
ACATGACGATGCAGTTATGTAGTTGAGAAGCGCATATAAATCAATGCTAC
AAACATTTTTATCATTTTGTGACGGCGTTTAATCTCATCGAAAAACGAGA
ACTAAACCCACTGATATACCTTTTCCAAAGAACTTTCAACCCATTGTCAA
AAATATATTCAAAAGACTATTTCGTGTTTTCGTACACGTCTATATACACC
ACTTCGATAAAATTATAACTCTCGGCGCCATATGAATATTATTGGGCAGA
CGGCGAAAAATATAAAAAACCGACAGCCGTTCCGGCACCGGTATACGTGA
CGTTATTGATGGATTGGGTGGACAATCAAGTTAATGATGAACATTTATTC
CCTCCTTCTGCAGTGGTGGATTTTTATAACAGAATCAATTTAATATACGG
AACGATACAAGAGGAATGCACGAACGACAGTTGTCCTGTCATGTCCGGCG
GTCCTAAGCATCATTGAAAGCGGGTATAGATTTAAGGGAAGCAGTTGCAT
TGCCGTGTGACGAAGATTTGAATGACTGGTTGGCTGTACATGACATTCAG
GCCGAAAAAGAAATGGGATTCGGGAACATTGAAATATAACCTACACAAGA
AAGCACAGATGCTGGTTAGCTGTTCACCAATCCATATGTCGTCAACTTCA
GATTCCAAAAAATCTTTCGGTTTCAAATCCAAACATCAAAAGAAGGACAT
GACGATGCAGTTATGTAGTTGAGAAGCGCATATAAATCAATGCTACAAAC
ATTTTTATCATTTTGTGACGGCGTTTAATCTCATCGAAAAACGAGAACTA
AACCCACTGATATACCTTTTCCAAAGAACTTTCAACCCATTGTCAAAAAT
ATATTCAAAAGACTATTTCGTGTTTTCGTACACGTCTATATACACCACTT
CGATAAAATTATAACTCTCGGCGCCATATGAATATTATTGGGCAGACGGC
GAAAAATATAAAAAACCGACAGCCGTTCCGGCACCGGTATACGTGACGTT
ATTGATGGATTGGGTGGACAATCAAGTTAATGATGAACATTTATTCCCTC
CTTCTGCAGTGGTGGATTTTTATAACAGAATCAATTTAATATACGGAACG
ATACAAGAGGAATGCACGAACGACAGTTGTCCTGTCATGTCCGGCGGTCC
TAAGCATCATTGAAAGCGGGTATAGATTTAAGGGAAGCAGTTGCATTGCC
GTGTGACGAAGATTTGAATGACTGGTTGGCTGTACATGACATTCAGGCCG
AAAAAGAAATGGGATTCGGGAACATTGAAATATAACCTACACAAGAAAGC
ACAGATGCTGGTTAGCTGTTCACCAATCCATATGTCGTCAACTTCAGATT
CCAAAAAATCTTTCGGTTTCAAATCCAAACATCAAAAGAAGGACATGACG
ATGCAGTTATGTAGTTGAGAAGCGCATATAAATCAATGCTACAAACATTT
TTATCATTTTGTGACGGCGTTTAATCTCATCGAAAAACGAGAACTAAACC
CACTGATATACCTTTTCCAAAGAACTTTCAACCCATTGTCAAAAATATAT
TCAAAAGACTATTTCGTGTTTTCGTACACGTCTATATACACCACTTCGAT
AAAATTATAACTCTCGGCGCCATATGAATATTATTGGGCAGACGGCGAAA
AATATAAAAAACCGACAGCCGTTCCGGCACCGGTATACGTGACGTTATTG
ATGGATTGGGTGGACAATCAAGTTAATGATGAACATTTATTCCCTCCTTC
TGCAGTGGTGGATTTTTATAACAGAATCAATTTAATATACGGAACGATAC
AAGAGGAATGCACGAACGACAGTTGTCCTGTCATGTCCGGCGGTCCTAAG
CATCATTGAAAGCGGGTATAGATTTAAGGGAAGCAGTTGCATTGCCGTGT
GACGAAGATTTGAATGACTGGTTGGCTGTACATGACATTCAGGCCGAAAA
AGAAATGGGATTCGGGAACATTGAAATATAACCTACACAAGAAAGCACAG
ATGCTGGTTAGCTGTTCACCAATCCATATGTCGTCAACTTCAGATTCCAA
AAAATCTTTCGGTTTCAAATCCAAACATCAAAAGAAGGACATGACGATGC
AGTTATGTAGTTGAGAAGCGCATATAAATCAATGCTACAAACATTTTTAT
CATTTTGTGACGGCGTTTAATCTCATCGAAAAACGAGAACTAAACCCACT
GATATACCTTTTCCAAAGAACTTTCAACCCATTGTCAAAAATATATTCAA
AAGACTATTTCGTGTTTTCGTACACGTCTATATACACCACTTCGATAAAA
TTATAACTCTCGGCGCCATATGAATATTATTGGGCAGACGGCGAAAAATA
TAAAAAACCGACAGCCGTTCCGGCACCGGTATACGTGACGTTATTGATGG
ATTGGGTGGACAATCAAGTTAATGATGAACATTTATTCCCTCCTTCTGCA
GTGGTGGATTTTTATAACAGAATCAATTTAATATACGGAACGATACAAGA
GGAATGCACGAACGACAGTTGTCCTGTCATGTCCGGCGGTCCTAAGCATC
ATTGAAAGCGGGTATAGATTTAAGGGAAGCAGTTGCATTGCCGTGTGACG
AAGATTTGAATGACTGGTTGGCTGTACATGACATTCAGGCCGAAAAAGAA
ATGGGATTCGGGAACATTGAAATATAACCTACACAAGAAAGCACAGATGC
TGGTTAGCTGTTCACCAATCCATATGTCGTCAACTTCAGATTCCAAAAAA
TCTTTCGGTTTCAAATCCAAACATCAAAAGAAGGACATGACGATGCAGTT
ATGTAGTTGAGAAGCGCATATAAATCAATGCTACAAACATTTTTATCATT
TTGTGACGGCGTTTAATCTCATCGAAAAACGAGAACTAAACCCACTGATA
TACCTTTTCCAAAGAACTTTCAACCCATTGTCAAAAATATATTCAAAAGA
CTATTTCGTGTTTTCGTACACGTCTATATACACCACTTCGATAAAATTAT
AACTCTCGGCGCCATATGAATATTATTGGGCAGACGGCGAAAAATATAAA
AAACCGACAGCCGTTCCGGCACCGGTATACGTGACGTTATTGATGGATTG
GGTGGACAATCAAGTTAATGATGAACATTTATTCCCTCCTTCTGCAGTGG
TGGATTTTTATAACAGAATCAATTTAATATACGGAACGATACAAGAGGAA
TGCACGAACGACAGTTGTCCTGTCATGTCCGGCGGTCCTAAGCATCATTG
AAAGCGGGTATAGATTTAAGGGAAGCAGTTGCATTGCCGTGTGACGAAGA
TTTGAATGACTGGTTGGCTGTACATGACATTCAGGCCGAAAAAGAAATGG
GATTCGGGAACATTGAAATATAACCTACACAAGAAAGCACAGATGCTGGT
TAGCTGTTCACCAATCCATATGTCGTCAACTTCAGATTCCAAAAAATCTT
TCGGTTTCAAATCCAAACATCAAAAGAAGGACATGACGATGCAGTTATGT
AGTTGAGAAGCGCATATAAATCAATGCTACAAACATTTTTATCATTTTGT
GACGGCGTTTAATCTCATCGAAAAACGAGAACTAAACCCACTGATATACC
TTTTCCAAAGAACTTTCAACCCATTGTCAAAAATATATTCAAAAGACTAT
TTCGTGTTTTCGTACACGTCTATATACACCACTTCGATAAAATTATAACT
CTCGGCGCCATATGAATATTATTGGGCAGACGGCGAAAAATATAAAAAAC
CGACAGCCGTTCCGGCACCGGTATACGTGACGTTATTGATGGATTGGGTG
GACAATCAAGTTAATGATGAACATTTATTCCCTCCTTCTGCAGTGGTGGA
TTTTTATAACAGAATCAATTTAATATACGGAACGATACAAGAGGAATGCA
CGAACGACAGTTGTCCTGTCATGTCCGGCGGTCCTAAGCATCATTGAAAG
CGGGTATAGATTTAAGGGAAGCAGTTGCATTGCCGTGTGACGAAGATTTG
AATGACTGGTTGGCTGTACATGACATTCAGGCCGAAAAAGAAATGGGATT
CGGGAACATTGAAATATAACCTACACAAGAAAGCACAGATGCTGGTTAGC
TGTTCACCAATCCATATGTCGTCAACTTCAGATTCCAAAAAATCTTTCGG
TTTCAAATCCAAACATCAAAAGAAGGACATGACGATGCAGTTATGTAGTT
GAGAAGCGCATATAAATCAATGCTACAAACATTTTTATCATTTTGTGACG
GCGTTTAATCTCATCGAAAAACGAGAACTAAACCCACTGATATACCTTTT
CCAAAGAACTTTCAACCCATTGTCAAAAATATATTCAAAAGACTATTTCG
TGTTTTCGTACACGTCTATATACACCACTTCGATAAAATTATAACTCTCG
GCGCCATATGAATATTATTGGGCAGACGGCGAAAAATATAAAAAACCGAC
AGCCGTTCCGGCACCGGTATACGTGACGTTATTGATGGATTGGGTGGACA
ATCAAGTTAATGATGAACATTTATTCCCTCCTTCTGCAGTGGTGGATTTT
TATAACAGAATCAATTTAATATACGGAACGATACAAGAGGAATGCACGAA
CGACAGTTGTCCTGTCATGTCCGGCGGTCCTAAGCATCATTGAAAGCGGG
TATAGATTTAAGGGAAGCAGTTGCATTGCCGTGTGACGAAGATTTGAATG
ACTGGTTGGCTGTACATGACATTCAGGCCGAAAAAGAAATGGGATTCGGG
AACATTGAAATATAACCTACACAAGAAAGCACAGATGCTGGTTAGCTGTT
CACCAATCCATATGTCGTCAACTTCAGATTCCAAAAAATCTTTCGGTTTC
AAATCCAAACATCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038222XLOC_038222Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060892-exon-scaffold_349-1575043694:756426..756689TCONS_00060892-exon-scaffold_349-1575043694:756426..756689Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:755267..755332TCONS_00060892-exon-scaffold_349-1575043694:755267..755332Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:754403..754487TCONS_00060892-exon-scaffold_349-1575043694:754403..754487Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:753701..753794TCONS_00060892-exon-scaffold_349-1575043694:753701..753794Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:753168..753301TCONS_00060892-exon-scaffold_349-1575043694:753168..753301Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:752339..752454TCONS_00060892-exon-scaffold_349-1575043694:752339..752454Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:751501..751587TCONS_00060892-exon-scaffold_349-1575043694:751501..751587Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1575043694:749677..750623TCONS_00060892-exon-scaffold_349-1575043694:749677..750623Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:756426..756689TCONS_00060892-exon-scaffold_349-1510915933:756426..756689Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:755267..755332TCONS_00060892-exon-scaffold_349-1510915933:755267..755332Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:754403..754487TCONS_00060892-exon-scaffold_349-1510915933:754403..754487Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:753701..753794TCONS_00060892-exon-scaffold_349-1510915933:753701..753794Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:753168..753301TCONS_00060892-exon-scaffold_349-1510915933:753168..753301Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:752339..752454TCONS_00060892-exon-scaffold_349-1510915933:752339..752454Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:751501..751587TCONS_00060892-exon-scaffold_349-1510915933:751501..751587Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1510915933:749677..750623TCONS_00060892-exon-scaffold_349-1510915933:749677..750623Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:756426..756689TCONS_00060892-exon-scaffold_349-1491911889:756426..756689Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:755267..755332TCONS_00060892-exon-scaffold_349-1491911889:755267..755332Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:754403..754487TCONS_00060892-exon-scaffold_349-1491911889:754403..754487Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:753701..753794TCONS_00060892-exon-scaffold_349-1491911889:753701..753794Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:753168..753301TCONS_00060892-exon-scaffold_349-1491911889:753168..753301Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:752339..752454TCONS_00060892-exon-scaffold_349-1491911889:752339..752454Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:751501..751587TCONS_00060892-exon-scaffold_349-1491911889:751501..751587Clytia hemisphaericaexon
TCONS_00060892-exon-scaffold_349-1491911889:749677..750623TCONS_00060892-exon-scaffold_349-1491911889:749677..750623Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060892-proteinTCONS_00060892-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:749677..756689 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.5875	2.37621	2.23389	2.69272	13.482	9.53553	15.9497	17.0419	8.76498	11.5514	10.837	6.96035	12.6108	11.9725	9.90426	9.06165	13.2676	12.1049	13.9145	15.8383	9.09152	10.9534	9.25135	11.1229	13.9798	16.2465	12.3331	9.88931	15.033	17.049
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005301MOB_kinase_act_fam
Blast
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BLAST of TCONS_00060892 vs. Swiss-Prot (Human)
Match: MOB3B (MOB kinase activator 3B OS=Homo sapiens GN=MOB3B PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 1.030e-98
Identity = 135/203 (66.50%), Postives = 166/203 (81.77%), Query Frame = 1 
Query:  262 KTFRPKKKWDSGTLKYNLHKKAQASLKAGIDLREAVALPCDEDLNDWLAVHVVDFYNRINLIYGTIQEECTNDSCPVMSGGPKYEYYWADGEKYKKPTAVPAPVYVTLLMDWVDNQVNDEHLFPPSADIPFPKNFQPIVKNIFKRLFRVFVHVYIHHFDKIITLGAEAHINQCYKHFYHFVTAFNLIEKRELNPLKDMTMQLC 870
            KTFRPK+K++ GT ++ LHK+AQASL +G+DL+ AV LP  ED NDW+AVHVVDF+NRINLIYGTI E CT  +CPVMSGGPKYEY W D  KYKKPTA+PAP Y+ LLMDW++ Q+N+E +FP    +PFPKNF  I K I  RLFRVFVHVYIHHFD++I +GAEAH+N CYKHFY+FVT  NLI+++EL PLK+MT ++C
Sbjct:   13 KTFRPKRKFEPGTQRFELHKRAQASLNSGVDLKAAVQLPSGEDQNDWVAVHVVDFFNRINLIYGTICEFCTERTCPVMSGGPKYEYRWQDDLKYKKPTALPAPQYMNLLMDWIEVQINNEEIFPTCVGVPFPKNFLQICKKILCRLFRVFVHVYIHHFDRVIVMGAEAHVNTCYKHFYYFVTEMNLIDRKELEPLKEMTSRMC 215
The following BLAST results are available for this feature:
BLAST of TCONS_00060892 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MOB3B1.030e-9866.50MOB kinase activator 3B OS=Homo sapiens GN=MOB3B P... [more]
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