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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060488 ID=TCONS_00060488|Name=TCONS_00060488|organism=Clytia hemisphaerica|type=transcript|length=1762bp
GGCTACtgaaaaaataatcaatttttaaaaatggcagccaaatcttgttt
tgaaaagaagCCGGTGTTTTCGCAAAGTTGTTAAATATTGTGACTTTTTg
gtgtttcaaagaaaattacGAAAGTTTAGCTTCAAATATCTTCGCAATCT
TAAGGCTTAAGACTTTCTtagccttataaaaggttgaacAAAGGTTCGAA
GCTGCTTACTACCGTTATATTTCTAGTGTTTCGTTTTTCTTTGGttccaa
aattctcaatttttgttAACAATGGCTTGTGCTGCTCTCAAGAGACCTCA
CAACTTTGATCTTCTTGGTAACAGTCCTGATCATAAAGTCAGTGCATCTC
CTAAAAGGAGAAGATGTGGAGCTGTAGTTACATCTTGTTCGTCAACAAGT
ATTTCTCCTTTCCTTGAAGCTACTCCAAAATTATGcaaagATGAGTTGGC
CAAAAATGTACAAGATGAATGGAGAAGGATACAACGCCGTAGGAGATTGG
CTTGtccctcatcacctcaaaacAATACATCCAACCTTCAGAGTCTTTTT
GGATCCCCAACTTCCTTCAACACAGGATATTGGTCACCTCCTAGAGGTTC
AATGTCACCATGTAGTAGTTCCATGTCTCCCCCCAGAACCACCACTGAGC
GTTCAGAACAGACCAGTTTGAATGTCAAACAAGTCGTTTCGCTCTGTGAA
AGATTGTGGAAAGAACGCGAGGATAAACTTCGTGAAGAATATGACAAAGT
TCTCAATGATAGACTGTCAGAACAGTACGACTCCTTTTTGAAGTTCACTC
AAGATCAAATAATGaggaaatatcaaaattcatcATGTAGTTACGTTTCG
TAACGTGCTTTGTCATCTGGACGAATGAATTGTAAATATGTCATTTAAAA
ATTTGTATTTCCCTCATTATTATTAGTTTGAATAAGACATTGTTTCAAAG
AACCTTATTAATTTTGGTATTTAGTACTTTAGAAAGCACTTTCATGTCTC
AGAAAAGATCTGAAAGGAActaaatttgagatttttgctcAGAATGAGGT
GATGAGactgtaaaaaaactttcttgacatttttcaaatttgaagcCATT
ACTTAATGTCAAAATGGTGCTAGgaatttattttgattgttcaTAGCAAT
TTTACTAcagtattttatttttgttccaattATTTCTATTATATTCAGTT
GCTGTGGGAGATTGAGCCTCTCTCCAAGCAAATTGGAGTTCCAGATGGAA
TTATTGACTTTCTGTATCATTTAGTTCCACTAATTTGTATCATAGTTTAT
GTTAggagattttatttttgttccatttttcttcttttacttAAAAGCAT
ATAGGTTAAATTTTGAACCACTTTTGATATGGTGAATTTTacttcaagaa
ttttggaatgTATTCTTTTCTGGGACAATTTCATTATATGTATACTTTCT
ATAAACTGCCTAACTAAAGACTCTTAAGGTTTTTTCGAAAAGATATTGAA
GAAAAGAATTGCATCTTTCTGTTGCTATTACCATAGTCGAAGCTTCCAAA
TTAGCAGTCTTCGAGACGGAATGATTTCTTACTCAATTgtagtatatatt
tttgaatgcttgataaattttagatttttagtgAGTTTAGTATATCCATc
agttttattattatttcaatTACTATTACTGGAAATATGGCGTTCTACTG
AATTTTAATATTGTATTATATTATTTGTTcacaaaataaactttttttga
gtATAAAAAACT Run BLAST on NCBI transcript from alignment at scaffold_343:90522..108035+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060488 ID=TCONS_00060488|Name=TCONS_00060488|organism=Clytia hemisphaerica|type=transcript|length=17514bp|location=Sequence derived from alignment at scaffold_343:90522..108035+ (Clytia hemisphaerica)
GGCTACtgaaaaaataatcaatttttaaaaatggcagccaaatcttgttt
tgaaaagaagCCGGTGTTTTCGCAAAGTTGTTAAATATTGTGACTTTTTg
gtgtttcaaagaaaattacGAAAGTTTAGCTTCAAATATCTTCGCAATCT
TAAGGCTTAAGACTTTCTtagccttataaaaggttgaacAAAGGTTCGAA
GCTGCTTACTACCGTTATATTTCTAGTGTTTCGTTTTTCTTTGGttccaa
aattctcaatttttgttAACAATGGCTTGTGCTGCTCTCAAGAGACCTCA
CAACTTTGATCTTCTTGGTAACAGTCCTGATCATAAAGTCAGTGCATCTC
CTAAAAGGAGAAGATGTGGAGCTGTAGTTACATCTTGTTCGTCAACAAGT
ATTTCTCCTTTCCTTGAAGCTACTCCAAAATTATGcaaaggtaatttttt
tgcattgcttggaaatttgattgaaagaaaatttatatGAATCATACTGT
AATACTATTCTGATTTAAAACAGTTGAATATCAAGATGATTGAGTTTTCT
CTGTTGAAAATAATTGCTTTGATTTTTATTTGGAGCCATCTTCTTTAATA
AGATATGTAATGCGCGAGCAGCAGTAGCAGAGCAGTGCGTGTCCTCTatt
aggaccctgccgacgcaccggacttaacgaacaccggacacgcaaaAATC
CGgtgtaaaagagaattttttttaccaccggacataAGGAAGTcagatgt
ccggtgtcggagaaggatattttttcccaccggacaatcaaatgacaccg
gacttattacgtccggtgtagcgaaaggatactttcttccaccggacaaa
tacaccggacagtccggtgcgtcggcagggtcctcctCTATTCTGACGAC
AGGTTGGGTCAGGCCCAGTTGAtagtttggttcgtgtcctccGGTCAACT
CTaagtatttgagaaaaaatggttatcgattcaaagaaaaaatgtaatta
GGTGATGgatagaaaaagatttttcatagaCTAAGTTAAAATTCACGCTT
GTGACAAGCACCCCCCCCCTACGCAAAAGCGAACGTACACAGATCGACTT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGCGTAACGG
ATTCGTACTCttatatactacctggggttttgtagaggtctgcgattcag
actacatgGTGGGGGAATATGCTCCAACCTATAAAGTCGCCCGGGCGTAC
GCCCGAGCGCCCTATTTTGCACTTATATACTTTTTACGTCATTGTTTGTT
TACGTCACTAACTCCAACCAAATTGGAAACAGCTGATTGGCTACtgaaaa
aataatcaatttttaaaaatggcagccaaatcttgttttgaaaagaagCC
GGTGTTTTCGCAAAGTTGTTAAATATTGTGACTTTTTggtgtttcaaaga
aaattacGAAAGTTTAGCTTCAAATATCTTCGCAATCTTAAGGCTTAAGA
CTTTCTtagccttataaaaggttgaacAAAGGTTCGAAGCTGCTTACTAC
CGTTATATTTCTAGTGTTTCGTTTTTCTTTGGttccaaaattctcaattt
ttgttAACAATGGCTTGTGCTGCTCTCAAGAGACCTCACAACTTTGATCT
TCTTGGTAACAGTCCTGATCATAAAGTCAGTGCATCTCCTAAAAGGAGAA
GATGTGGAGCTGTAGTTACATCTTGTTCGTCAACAAGTATTTCTCCTTTC
CTTGAAGCTACTCCAAAATTATGcaaaggtaatttttttgcattgcttgg
aaatttgattgaaagaaaatttatatGAATCATACTGTAATACTATTCTG
ATTTAAAACAGTTGAATATCAAGATGATTGAGTTTTCTCTGTTGAAAATA
ATTGCTTTGATTTTTATTTGGAGCCATCTTCTTTAATAAGATATGTAATG
CGCGAGCAGCAGTAGCAGAGCAGTGCGTGTCCTCTattaggaccctgccg
acgcaccggacttaacgaacaccggacacgcaaaAATCCGgtgtaaaaga
gaattttttttaccaccggacataAGGAAGTcagatgtccggtgtcggag
aaggatattttttcccaccggacaatcaaatgacaccggacttattacgt
ccggtgtagcgaaaggatactttcttccaccggacaaatacaccggacag
tccggtgcgtcggcagggtcctcctCTATTCTGACGACAGGTTGGGTCAG
GCCCAGTTGAtagtttggttcgtgtcctccGGTCAACTCTaagtatttga
gaaaaaatggttatcgattcaaagaaaaaatgtaattaGGTGATGgatag
aaaaagatttttcatagaCTAAGTTAAAATTCACGCTTGTGACAAGCACC
CCCCCCCTACGCAAAAGCGAACGTACACAGATCGACTTgaccccccctcc
ccccgttCGTTTTCGTTCGCTTTTTGCTGACCCCTCTCCCCCCTCGGcga
cgaacgtactttttgaatggcccctaACCTATACTTTAAAAACCAATATT
TTACCCCAGTTTAccatgaagtcgggtaactttcATCattggagggaaac
ttgcatagccctccAAATGAATAACCTGGCTGggcattaaaatacaaagt
taaatccaaacaaacctgatttacaaaaaaattgcgGGTGGTAAAATGTA
TAAATATCTCTAGCCTGgttatccaagctcaaaattttagaaaaaacaaa
acttatCCCAGCATAccaagttctaaaattatagataATGATATCATGGT
AATGTACGTTAGCATATTATGTGATTACTTAATAGAactagagcttggtc
tccctaagaccagacccgatcaatcgaacttgtcgaaccaatcgaacaat
cgaactaatagaactccatcgaacgattaaagttcgattaaaaaaattaa
tcgaacctaatcgaacactcaaaatttttgaagcaatagcagttcgatta
gttcggtcagtaaaaagttcgattagttcgatgatattaaaatcctcata
tcttccctctcttgcaaaaactttgtcctNgcaaaaactttgtcctggca
cgcgattgccaatttcgacagttcccggacttaacagcttgatgtttatt
gtacccggatatttgtctatccggaaaaaaagtctgttgcgatttcgcgc
gAGGCCGAATGGCAGAATACTACGCCCGCCCCAACAAACCGCTTcttctg
gcgctaaaaggatacaggaaaagtgtgtaatccgttatcggaagtaattt
cccgatttacattccgaatttggctttgaaaagaagctaatatacggtgg
cggagcagcacaaacttgtcaaacaaaattggtttaacgaactgatcgaa
ccgaaacccaatgatcgaacttaatcgaacactcacaatcttttaaaaaa
gcttagagttcgattaatttatttaatcgaactttaatcgttcatggagt
tcgattagttccattgttcgattggttcgacaagttcgattgatcgggtc
tggctaagagaatgaaagtgcaaacccaaaACTTttctagccaacccagg
gcaccaaaacagaaattaattaAAAGGAGCCTTTAAAgatctaaagctat
tttaaaacatctaaaagattacaccaaagtccatcaACACACGCAAACGT
GTCACCATGAcaaaccatgttttcttggaaaataaaCTCGCCCccacttc
ttctttttcatgttttcatgtaacagaaagctgtaTGTTCACGATGCcag
tcaaaaattgtgtgaagtatcaaaaaatcaacaaaaacacatTTTTCTCA
ATATATaactctaaaaatattttcaatatgaATGCAAAACTTTACCAATA
CATAGTAAATATATACAACAAGAAATAGGCtaagtaagttttttttgaaa
aaagtacgtTTTTGGTGGCTGAAAGTGGAAAAATATACAAGTACCATTAA
ACATCAGCCACCACAGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNatgaaaattaaaacaaaaatcctTGAGGGGAAGTGTCAATCTAA
ATTGCAGATAAAAAATGTACATTAAAATTTAAGGGTAAATGGTCCATTTT
GGCGGctgaaaaaaaggattttttatttcgttctttttatGAAAGTGTCT
ATCAGCCACCTAAGGATTGCCTAGCTTCTCTTTGCTCCCCCCTCTCACCA
AAAATAAGAGtatagaaagaagaaaattggcTTTGTTTTGTGTCTTGACT
TGTGGCACTATGATATGATTCACATGGAAAGTGAATACTCCTTCGCCCAT
CGGAGCAAACTCCTTCACCCTGTGGCGAAAATTAAAGGGCTCGAAAATAA
AAGGCGCGCAGAAATTAAGGGCATTAAGGTATCTCTTAATCTTAAGTGAT
GTCATGCCTAATAATGTTTAATACAGAGCTGCAAATAAGCGTCCGTCATC
GGTCAACGGTTTAACCAATCTCTGAAAAGAGGAATAAACTTGGTTGggat
ttaaaaataaatctattACACCCCTGTATTTTGCTTACATAGCCTATTCT
TTTAACACTTGCTTccttcagttagtcacactagcgtctcGCCGAATTgc
ttatcaaagattaatgctgcggaAGCGCTTTATCAATTACTTGGACTCAA
TCAAGAAAAATGTgccgcaaaatttctaaagggatttatgaaaaaataaa
ccggtactttttaataaaattaacaCTAGATAAAACTATGAAGAATTACC
TAAATTTtaagccatagatgaaaaaatttgaaccaagccaaccttaaaaa
ctaatttgaagaacgacttcccaagaaaaagatctacggatGAGAAGACA
ACCACCTAGATCTGCGCACCGCCAGATAGGCTATTACCTGGAAATTTTGC
CAGAGCTCATAtgctgacccatttacatgtgtggAATTATTCTTAATTTA
GTGTGTAATCAAGGCCTTACAATCAAGGTTTTATCTCGGGAATTGcataa
caaattttggttggtcattattttttgtttcaagCTTTCGATATTTTACT
TTAATTGCCTTGGGATCTtcaacttgattcaggtaactctcaccCTTGTT
GTTTCAAATACATCATCATCCTGTAGATGGCTGATGTTGTAATTTCTGAA
accttgatttcctagtgtgactaactgtcctTCGTAGcttttaaggtatg
tgttcacctttcttgacacattctctttaattgatcatatctttagaaca
acaaatttttatatatcaaaagtatcttgggattttttttggaattgact
ttaactctttaaatcctaaattctgtaaaaatatcgataaaaaagtaaat
ttaaatgtgattttttcagttatctgtaaattgaggaaaaacaacttggt
tagaaataaaatcctaagacactttttaagtttgatcttttgggaatgtc
ataaaaaagaatgaagtcgatatctaaatactatgggtgactttaacttc
gttaaaagtagtatggtgtggtaaaatttcatttttttctacaccaattt
gaaatttttaacgagatgattgctgtttatttgagtaatcagtgaaattt
gtcaaaaatattactattcaatagaggtgagaacaaacatcagctgaatt
ctctcttttgtcttttttgttgtttccgaaagagacaattatttgattaa
ataatccatcataagacgaactttgttttgaaatttaaatggttaaaact
ctggatcaaaaaaagattttaagatcgcgattttaccaaaatgaaatcca
gtaaattttcttccactttgactgaaaaaaatttttttgacaaaaaattg
gaaaaaaggtgtacacataccttaatagTGTTTCTAAAGTTTACTTTACT
TTGTTCTGGGTAATTTTATTGACGGTTGTTTCTAAGattacttttttatt
gactGGTTTATTCCGTAgctttcaagagtgtttttaagttaacttttatc
aacttgctttcttcgtaactttcaagagtgtttctaaaatcacttttatc
aacttgctttcttcgtaactttcaagagtgtttctaggttaacttttatc
aactcgctttctccgtaactttcaagactgtctaattttagaaaaatata
cactgaatgGCCCAACAGGGGGCCAGTTTGAgcgacaggatttcatttct
gtcggacatgatgtctgattgactaaaaatatttatttgcaggcCTGTAA
TATCGTTATTAAATTAGAGGTTACACATCCAGCAGCCTAGTTTAGGTATA
AACTTATTTCTTTTTttatgatttttgttggcgaaaacgTTTAGAACATC
CCACCGTTCTGCTCGCTATAATATAGCGAGTTGAACCTGATTGGTCGAAA
AAAGCTGTCAAATATTTGTAATAATTATCGGAGCAGCGAACTCACTCACT
AAACAATTATGCGCAATTATCTCATTTAGCCGCGGCTTTTTTATCTTAGT
AAGAGTAACCACggtaaaacatatcaaaatcaaaacattcaaatcaaATC
TTTTACTCAATAAGTAGACCTTTCTCAAAGCTATTCACAATTGACTGTGT
TATTTAAAGCTTTTGCAATCCTTGTTGCAattcttttcattcaaatttcc
tCGTAATGATCTTAAAaacttaagagccattttttttaaaaatcttcaga
ataaagaaagtgtgatacctcaccctctcagattttgatgaaattttgac
caaatgatccatcacacaagaaaataagaccatgaaaatttcaccttgat
atctcaagtagttttgaagatacaNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNttttcttgtgtgatggatcatttggtcaaaat
ttcatcaaaatccaagaggatgaggtatcacaccctgaagactcttaaaa
aaaatggctcttaaataTCCACTAAAATGCTCCATATAAAAATCATAAGT
TATGTTTCGACCGATGAGTCCACCGCACGGGTATTGATGAAACGGCCCCA
TGTAAGTCGATATGCATCATTTTTATAACCTAGCTTAATTTGGTAGAAAA
GCTTGATCAATTCATGAGAGTAATTGGTATGACCAGTTGCTTTGAAATAA
AGAACTATGATATCATTAATATTTCGCAAAATCACGTTGATTGAGAACAA
AACCACCTTTCAAGCTCTCTTCTTTGATCATTGCAAACCTTTCAGTTTGT
GATTCAGTTTAGTTGGTATAAAAGGTCTGCCAGACGCTTCACCGGAGAGT
CTTTAAATTGTGAGCTccctttattttttaaaaggaTACTGTAGAAAGAG
AACGGAGAGTGTATTCTCCTCTCGCTGAGCTAATAGTTTGTTTGCTCTTT
CCATTGTTGGCCAATTACCTTACGAATGCTTTATGTAAATCTAATAGCGA
GAGATTGATCTCTCGCGTTCTCtttctcttcaaaaacatgtaaaaaaccT
AACAAATCGACACCCTGGACACTCACACTGCTACTCTGGATTCTAAGAGA
ttctacgttctgtaaaatgcaaagaaaaataaaaacataacagtAAAGAT
TGCGGCCAAAGTAGCGGTATAAACTTTCAGATTAAAAGCATTGCTGTAGG
GCTGTATTTTTAGGAAGAAAACAgctctaaaacgcttaaaattgagcttt
tttatcGCGGTTTTTTGTCgaaccgccatctttgtttatgcAAAAGGCGC
CATTTTTAAAGCGACATTTTACGAATAATTAATACGGTTAATAAACAATA
GAGAAGTTTCTGATTCGCCAATTCGCTTTCTTGCAATTTTTGACTAAGTC
TGGGATGTTCTAAAcgttttcgccaacaaaaatcataaaaaaagaaataa
gtttatacctaaactaccAGCAGCCATCAAGAAACGTCCAAATTCTCGCC
ATCTTGAAATTTATGATCTCACATGAATTTTTACTATCCAACCACGCTCT
TTTATTCACCTGCAATTCTGTCGGCGAGTAACTCGTAGAgtaaatggtag
agtagagcagCAAGTAGAAATGCCTAGTTCATTCAGGGGGGACAacagag
gcagggtactaacccatagggtactaacttgattttttactgaaattttg
tttagtaccacccacgtatatttagtaccgggtactacttcattttagtc
tacacaatagacagatccaggcttttaggccttactcttggtctataggc
actgttATAGgtggccactagtgacccccaccgggaattgtttattaata
ggtttaaacataatagacaacattcacaaaagatgtttatcaatagagat
tttNNNNNNNNNaatcttaaattttacagattagaccaaGAGAGGGGTAC
TATTGTTAGTTTTTCAGACTGAAAATTGACAGATAATTCAAGCAAACTAT
CAAACCAgattttgtcctttgatttgcacacttcttgaccattttgagaa
aaaaaattagtcgattaaaaaaatttcaaatcaaaaaaattagaatttga
aaaaagtcgaAACATTGcaacaaactactttttttattgaaaaacagcaa
aattctgtgaaaaagtacccaaatagtatCCTTTACTTGCTTGAAGAGTG
AAAAGTACACACACCCCCACCCCCaaagtagtaccgggtactaacttttt
tgaaatgcaaaaatagacaccaccacctggcTATGGGTCAGTACCCTGCC
TCTGTACTCCCCCCTAGTtcatttgctttgaaattttgctactttgaatg
gtcaggcatttgatggctatNCCTCTGTACTCCCCCCCTAGTtcatttgc
tttgaaattttgctactttgaatggtcaggcatttgatggctatgcaagt
ttccctccactgattcaagttaccctccactgattcaagttacccaactt
catgGTATAAGCAGAGAGTCACAGATGTATTCCTTATAAGAACACACGGC
GAATGCATTAGTCTGCAGTTATAGAAGTGTCTTTGTGATTGCGGCACTTG
CCTTTGTTGATTTGGTCTTCAGGCTATATCTTAACATTCCCGGTTGGATT
CCAGGATTGTGTGATTGCTTGAAGAATGTAGGACTTctaaaattgaggtt
tttggtgggaaaaataaaaaaaggtttcaatttCACTGACCCATTAACAA
TCAATTAGACCTGTCCTTGGTTTTCCCcctctaaaaaattgaaaaaacct
gtttcaattttcttaagaagGTTCAAAAATCCAATGATAGTATTAACCTC
CAACTGTTCTAACTTTTAATACAAATTACAccaatatcaaaacatatcag
agggggtGTGTGCAGCCTAGGGTACTATGGACTGCTTTTTGAGATACTTG
GACCACGTTGTcataaaaatcacaaaagattGCTTGTTTcaagctccaac
cctgaccctaactggtaATAACCACACCTAAACTCAACCCTACTAGGTTG
CCTGCTGGTCCTGCCACAATCCCTGCATATCCCATTGAGAAGAATCCATC
ACTGTCAAGGGGGGTTCgggttattaaaaaaaacacactaaattggatgt
tttatgtaatttttacaatatttttttactttttagcacgaaATTGGTTC
AATGTGTAGAACCTCTTTTTTCATCAACTCAGAACCgtcaccctttttag
tacattgtactaactcaaatttagcttgaaaaaaaacaacactcCTTCAC
CTTTGATTAGTACCCCCTGTTTGCTTTGTGCCTGTCTTAAAGTGTTTGTT
CCATTTATGTGAAGTGTATGGtcgtaaaaagattttttcagttttttgca
gaaaaaatcattaatttttgaagccttgtagGGGTCAGTGGATTCTTCTT
CAGTTTCCAAGGGGGAACCAACCTGCTAGGGCACAATCACGATGATACAC
TATATGATCGCGAATATAGTCACTCGAAGGTAATATTGTGTCTAGTGTTT
AGAAATTTCAATTAGTCAGCATTTTAAAAGCACAATATTCAGATGTTTCT
AAAAGCGTAGTAACTAAAAGGTGAAACGTCAGAGAAACGAgtggaaacgg
gtggaaacgatacagaaacgggtggaaacgacacGAAAACGGGTGGAAGC
GATACGGAAATGGGTGGAAAAGATActgaaacgggtggaaacgacacGAA
AACGGGTGGAAGCGATacggaaacgggtggaaacgatacGGAAACGATat
ggaaacgggtggaaaccaGTGGAAACGATACGGAAATTtatgtaacgcta
gcccagcatTAAGATACATCTCCGTCTATCACAGGCTTCGCATAACCGTA
AGAGTATACGGATATAGGTAATCTATGAaaaagtcgttgcagtgcaaatc
tttctcaaatttaaaaacccactttcccgtggaaataattgacgtttttt
gtttttttgggacccttggggcataagctacccgttgaccacaaaaattc
caaaattcttgaattgaccgttgacaacattagaaCGGGACCCAGTGACG
TCACAAGTTTGGGAAAAACGATAtcgaaatgcgatatctcgagttcaAAA
GGAGTTGAGAGGTCGTTGACCCTTCATTAGATCGAGAATTTTAATGGAAA
ATAAGTTAGGAggggtaagagtgggtatatatagacttttgaaattaaat
atattcaaattgaggcatattaggtccgatgacgtcatcaaaaactgaaa
aatacaatatctagagtttgagaaggatttaagcaatgattgacccctca
ttggaaagtgaaaagtttattacacATTGAGATGACATCATTTAGAGCCC
AAATGACgtaacaaaacataaaatttgtcATATCTTTAGTTTTAAACCAT
TTTAAGTGGTAATTTTTCGTTCTTTGGGATTAATTCACTCTATAGTTTCC
CCTTTACTATCaaaagggcttatgatgcgttcagcttatgcgagtttata
aaaaaattctcaaatttttccaaggggttgATTCGAGTATGAAAGAGGGA
AGTGCAGTTTTAAAACAAGAAATCttattgtttttcgaaaatgcAGTTAT
TATTTGGTCTTCTAAGGCGCTTCATGTCGACCTCAAATTCGTAAATACAG
CaagcaacatttttttatatattttccatTCTTACACACTGATGACGctc
tcaatttgacgttttactgCTCAAGTCAATAAGTTCCCGTTGTcgattaa
aattaaattgaaatagCTTTCAAACTTACTGAAGAAACTCTCACAATTAa
agatttattatttactaagcttttatttactatttattttttacttctGG
TTCTTATTCCATTTGAagcataaaaagatatttacgaTATAATATGTACT
CCCGTGGTTGATGAAAACTTATTCGAATTCtccttaaaaataaagtttga
gagcatcaacaataccatgtttatcatcctaagggctttgctaaaccggc
gtttgcgacgaagGGAACCGACTAATGATACAACAGAAGCTTTGTTCACT
GTTGGTCCTTTACCCGTTTCCAATCGTTTCTCCCCGTTTCCATGTCGTTT
CCACCAGTTTCCCTGTCGTTTCCAGGGCGATTCCCCACGTTGTTCTAAAA
GCGCTATCAGTTTATTAATTACACTTACACAATCTTTTTTCTAGATGAGT
TGGCCAAAAATGTACAAGATGAATGGAGAAGGATACAACGCCGTAGGAGA
TTGGCTTGtccctcatcacctcaaaacAATACATCCAACCTTCAGAGTCT
TTTTGGATCCCCAACTTCCTTCAACACAGGATATTGGTCACCTCCTAGAG
GTTCAATGTCACCATGTAGTAGTTCCATGTCTCCCCCCAGAACCACCACT
GAGCGTTCAGAACAGACCAGTTTGAATGTCAAACAAGTCGTTTCGCTCTG
TGAAAGATTGTGGAAAGAACGCGAGGATAAACTTCGTGAAGAATATGACA
AAGTTCTCAATGATAGACTGTCAGGTAAATATTTTTACACATGGGCAgct
ttatttttaaaagaaaaagtcacAGCTAATTAAGACGTAGTAGTTGTACA
GTTGACTTTCTCTGGTTCAATCTTTAAGTGGCcaagaattttatttaaat
tatctatttcataccttaaaacaagtttttttgcttatttaataacgcag
gaatttaatttggcaggtgaccaaaaaagttttttcagagggaatttaat
ttggcggatagctggataaattaaatttgacaggaatttaatttggcggt
tgcaggatatttttggcaaaaagcgttattaaataagcaaaaaaacttgt
tttaagGTATGAAATAGCACGAATTCGGGGAATGCGtgaaatgaatttaa
tttggcaggaacttaatttggcgccaaattttctttccgccaaaatttct
tcctttatggTATAGAGAGATTGGAATTGTACTgtatttaaatttcaaat
aataGAACTTTGAATTATAAAGCGTTGACTTCCACTGATTCTTGGCCTGT
TACTTTTCTCCCCATTGTTATTCAGCTTTATTTGTTGTTTTcctgtaaaa
ttttatttatacaaGATTATTCCAATTTACAGAACAGTACGACTCCTTTT
TGAAGTTCACTCAAGATCAAATAATGaggaaatatcaaaattcatcATGT
AGTTGTAAGTATACCTTTAAATTTGTTCTCAGAATAAAAGGTTCtttatt
cttcaaaatttttgacttttctgtCTCGAAGGCTTATTTTTCATCAAGGC
TAGGCTAGTTTGGCGAAAGAGACCACATTTTTCTGGGGTAAATACATCTG
AATGCATTtatctttgtttaaaaaagatGCCGTGAGGgtttttgactttg
ttttttccctatttctgtacattaaatttctttttctatttcagACGTTT
CGTAACGTGCTTTGTCATCTGGACGAATGAATTGTAAATATGTCATTTAA
AAATTTGTATTTCCCTCATTATTATTAGTTTGAATAAGACATTGTTTCAA
AGAACCTTATTAATTTTGGTATTTAGTACTTTAGAAAGCACTTTCATGTC
TCAGAAAAGATCTGAAAGGAActaaatttgagatttttgctcAGAATGAG
GTGATGAGactgtaaaaaaactttcttgacatttttcaaatttgaagcCA
TTACTTAATGTCAAAATGGTGCTAGgaatttattttgattgttcaTAGCA
ATTTTACTAcagtattttatttttgttccaattATTTCTATTATATTCAG
TTGCTGTGGGAGATTGAGCCTCTCTCCAAGCAAATTGGAGTTCCAGATGG
AATTATTGACTTTCTGTATCATTTAGTTCCACTAATTTGTATCATAGTTT
ATGTTAggagattttatttttgttccatttttcttcttttacttAAAAGC
ATATAGGTTAAATTTTGAACCACTTTTGATATGGTGAATTTTacttcaag
aattttggaatgTATTCTTTTCTGGGACAATTTCATTATATGTATACTTT
CTATAAACTGCCTAACTAAAGACTCTTAAGGTTTTTTCGAAAAGATATTG
AAGAAAAGAATTGCATCTTTCTGTTGCTATTACCATAGTCGAAGCTTCCA
AATTAGCAGTCTTCGAGACGGAATGATTTCTTACTCAATTgtagtatata
tttttgaatgcttgataaattttagatttttagtgAGTTTAGTATATCCA
TcagttttattattatttcaatTACTATTACTGGAAATATGGCGTTCTAC
TGAATTTTAATATTGTATTATATTATTTGTTcacaaaataaacttttttt
gagtATAAAAAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060488-exon-scaffold_343-1491911889:90522..90961 | TCONS_00060488-exon-scaffold_343-1491911889:90522..90961 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1510915933:90522..90961 | TCONS_00060488-exon-scaffold_343-1510915933:90522..90961 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1575043694:90522..90961 | TCONS_00060488-exon-scaffold_343-1575043694:90522..90961 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1491911889:105866..106195 | TCONS_00060488-exon-scaffold_343-1491911889:105866..106195 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1510915933:105866..106195 | TCONS_00060488-exon-scaffold_343-1510915933:105866..106195 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1575043694:105866..106195 | TCONS_00060488-exon-scaffold_343-1575043694:105866..106195 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1491911889:106804..106875 | TCONS_00060488-exon-scaffold_343-1491911889:106804..106875 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1510915933:106804..106875 | TCONS_00060488-exon-scaffold_343-1510915933:106804..106875 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1575043694:106804..106875 | TCONS_00060488-exon-scaffold_343-1575043694:106804..106875 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1491911889:107116..108035 | TCONS_00060488-exon-scaffold_343-1491911889:107116..108035 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1510915933:107116..108035 | TCONS_00060488-exon-scaffold_343-1510915933:107116..108035 | Clytia hemisphaerica | exon |
| TCONS_00060488-exon-scaffold_343-1575043694:107116..108035 | TCONS_00060488-exon-scaffold_343-1575043694:107116..108035 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_343 | supercontig | scaffold_343:90522..108035 + |
Blast
BLAST of TCONS_00060488 vs. Swiss-Prot (Human)
Match: AKIR1 (Akirin-1 OS=Homo sapiens GN=AKIRIN1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.654e-18 Identity = 36/65 (55.38%), Postives = 51/65 (78.46%), Query Frame = 2
Query: 656 EQTSLNVKQVVSLCERLWKEREDKLREEYDKVLNDRLSEQYDSFLKFTQDQIMRKYQNSSCSYVS 850
+Q + ++QV +CERL K+ EDK+REEY+++LN +L+EQY+SF+KFT DQIMR+Y SYVS
Sbjct: 128 DQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIMRRYGTRPTSYVS 192
The following BLAST results are available for this feature:
|
