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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060453 ID=TCONS_00060453|Name=TCONS_00060453|organism=Clytia hemisphaerica|type=transcript|length=1499bp
TGCGtgtataaaaagtttttttttttaactgaaaatcattttggatattt
tttctgtaaacacttTGAAGAAATGACCTAGCACAGCTTCCTTGatgtat
tttcttttcaaaataccACCAAAACAAAGGGTTTTTATTCTAGGTGACAG
TGCTTGAAGAATCATTATTATCCTGTTCATGTCAGTGAAAAAGTCACAAA
CAATGTAGTTTCTAGTTCAATAACTACATCAAAATATCACCACCTTAATA
AAAGCTATGAACCATTAGCCATCTTCTTTACAAATGAaccaatgttttta
tttcaatttcttttccttttctgCAATGTCAGCACTTTCCAtgaattatt
gaaaaacaaCACGAAAATTCAGACTGGGTGCATATTGACAAATCAGATGA
AATGCTTTGACACTGGAGTGATTTAATagggtgaacttttttttttatga
caCTCAGTTTTTTAATCAAGCATTTTTATTATCCATTTTTGAAATCCAAC
TTTaaaatgtttccaattcttttttgATACTGCTGGTAAAACAGGTAATT
TTTagtcaatattttgaaatttcagattttgaaaGTAATCAATACCCTAC
AATtctgttcaaaatttgatgaaatttccttAGACTAGATCAAGTCTTTT
GGACCTGTCTGTAAATTATGACTCCACACACTCTTTGACTTGAGGCATTA
CTCACTTAATATTGTAATAAATTGTAATCATTAAATCAATTTcctatatt
tacattttttgtaaaacaaaaattttaattgtggCTTGAGGGAAAACTCA
AGAATACTGCCCAATATTGAATCTATCTGAGAAATGGTGATCCAGGTCCA
GGTAGTCTTCCAGTCGAGTTTCAACAGCCTGTCCGTTCAATCTTAGCTTT
GTAACAACAAAAATGTTTCAGTGATATTTCTATagttttatgtttaaatt
cttAAAGAATATATTTTGGCACAGAAGAAAAGTGTATAAACGTTTATATT
TTGTGAAGAAGCTTACTatcattttgttctttttggacaaaaagaagaag
gaaaaatGTGTCGACGACAATGACAAGGATTATATACAAGAAATTGTGAA
AAATCGTGTTGAAGTGAAGGTACTCAAGACAGAATGCTGGTGCTCGGAAA
GATGAAATCTTTGTAAACAGACGATAGAGACCGTTAAAAGTACTCTAAGC
AATGAAGAGGAAAGGAAACAaggatcaaatttaattttccagGAGCATGA
TCGTGAAACATTTATATTGAAAGCAATAAAATCTTTATTATGTGGCGATT
ATGGGTTCAAACCTTATGCTACTTAACAAATAGATGGAGATAGAAAGTGT
GAAACCACAAAGAGGTGGTAAGCAATGTGTTTTTAAAATGCTTTGGGCTC
TGATGAAGAATTCTTTAGTTTTGCTGCAtttcttcaaactttaaggggtc
tggacatacccaatttttcgattttacaccaacttaaatggcaatttct Run BLAST on NCBI transcript from alignment at scaffold_341:155589..157087 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060453 ID=TCONS_00060453|Name=TCONS_00060453|organism=Clytia hemisphaerica|type=transcript|length=1499bp|location=Sequence derived from alignment at scaffold_341:155589..157087 (Clytia hemisphaerica)
agaaattgccatttaagttggtgtaaaatcgaaaaattgggtatgtccag
accccttaaagtttgaagaaaTGCAGCAAAACTAAAGAATTCTTCATCAG
AGCCCAAAGCATTTTAAAAACACATTGCTTACCACCTCTTTGTGGTTTCA
CACTTTCTATCTCCATCTATTTGTTAAGTAGCATAAGGTTTGAACCCATA
ATCGCCACATAATAAAGATTTTATTGCTTTCAATATAAATGTTTCACGAT
CATGCTCctggaaaattaaatttgatcctTGTTTCCTTTCCTCTTCATTG
CTTAGAGTACTTTTAACGGTCTCTATCGTCTGTTTACAAAGATTTCATCT
TTCCGAGCACCAGCATTCTGTCTTGAGTACCTTCACTTCAACACGATTTT
TCACAATTTCTTGTATATAATCCTTGTCATTGTCGTCGACACatttttcc
ttcttctttttgtccaaaaagaacaaaatgatAGTAAGCTTCTTCACAAA
ATATAAACGTTTATACACTTTTCTTCTGTGCCAAAATATATTCTTTaaga
atttaaacataaaactATAGAAATATCACTGAAACATTTTTGTTGTTACA
AAGCTAAGATTGAACGGACAGGCTGTTGAAACTCGACTGGAAGACTACCT
GGACCTGGATCACCATTTCTCAGATAGATTCAATATTGGGCAGTATTCTT
GAGTTTTCCCTCAAGccacaattaaaatttttgttttacaaaaaatgtaa
atataggAAATTGATTTAATGATTACAATTTATTACAATATTAAGTGAGT
AATGCCTCAAGTCAAAGAGTGTGTGGAGTCATAATTTACAGACAGGTCCA
AAAGACTTGATCTAGTCTaaggaaatttcatcaaattttgaacagaATTG
TAGGGTATTGATTACtttcaaaatctgaaatttcaaaatattgactAAAA
ATTACCTGTTTTACCAGCAGTATcaaaaaagaattggaaacattttAAAG
TTGGATTTCAAAAATGGATAATAAAAATGCTTGATTAAAAAACTGAGtgt
cataaaaaaaaaagttcaccctATTAAATCACTCCAGTGTCAAAGCATTT
CATCTGATTTGTCAATATGCACCCAGTCTGAATTTTCGTGttgtttttca
ataattcaTGGAAAGTGCTGACATTGcagaaaaggaaaagaaattgaaat
aaaaacattggtTCATTTGTAAAGAAGATGGCTAATGGTTCATAGCTTTT
ATTAAGGTGGTGATATTTTGATGTAGTTATTGAACTAGAAACTACATTGT
TTGTGACTTTTTCACTGACATGAACAGGATAATAATGATTCTTCAAGCAC
TGTCACCTAGAATAAAAACCCTTTGTTTTGGTggtattttgaaaagaaaa
tacatCAAGGAAGCTGTGCTAGGTCATTTCTTCAaagtgtttacagaaaa
aatatccaaaatgattttcagttaaaaaaaaaaactttttatacaCGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060453-exon-scaffold_341-1491911889:155589..157087 | TCONS_00060453-exon-scaffold_341-1491911889:155589..157087 | Clytia hemisphaerica | exon |
| TCONS_00060453-exon-scaffold_341-1510915933:155589..157087 | TCONS_00060453-exon-scaffold_341-1510915933:155589..157087 | Clytia hemisphaerica | exon |
| TCONS_00060453-exon-scaffold_341-1575043694:155589..157087 | TCONS_00060453-exon-scaffold_341-1575043694:155589..157087 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_341 | supercontig | scaffold_341:155589..157087 . |
Blast
The following BLAST results are available for this feature:
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