TCONS_00060335 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060335
Unique NameTCONS_00060335
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length134

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060335 ID=TCONS_00060335|Name=TCONS_00060335|organism=Clytia hemisphaerica|type=transcript|length=134bp
TGGAAAATATGATATGTCATTGTTAAAGTTTGTCGTCAATAATGTCAGTA
GTCAAACCAAGATCTCTTTGCAGTATACGTCTGAAGCCCCAGGTTATAAT
CTGAACACACTGGCATCTAACGATGAGATGGGCA
Run BLAST on NCBI

transcript from alignment at scaffold_340:22201..22334

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060335 ID=TCONS_00060335|Name=TCONS_00060335|organism=Clytia hemisphaerica|type=transcript|length=134bp|location=Sequence derived from alignment at scaffold_340:22201..22334 (Clytia hemisphaerica)
TGCCCATCTCATCGTTAGATGCCAGTGTGTTCAGATTATAACCTGGGGCT
TCAGACGTATACTGCAAAGAGATCTTGGTTTGACTACTGACATTATTGAC
GACAAACTTTAACAATGACATATCATATTTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037958XLOC_037958Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060335-exon-scaffold_340-1491911889:22201..22334TCONS_00060335-exon-scaffold_340-1491911889:22201..22334Clytia hemisphaericaexon
TCONS_00060335-exon-scaffold_340-1510915933:22201..22334TCONS_00060335-exon-scaffold_340-1510915933:22201..22334Clytia hemisphaericaexon
TCONS_00060335-exon-scaffold_340-1575043694:22201..22334TCONS_00060335-exon-scaffold_340-1575043694:22201..22334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_340supercontigscaffold_340:22201..22334 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060335 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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