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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060236 ID=TCONS_00060236|Name=TCONS_00060236|organism=Clytia hemisphaerica|type=transcript|length=901bp
CAAAAATCAAAGGTGTCTCCACAGGCTTTAAAACTTTCGACACATCTAAC
ACTCTCTGCACATGCTTGTGTGCTGTATGCTCCAGGAAAAATATTGAGCT
GGCTCCCTTCTTCCTCTGTGATGCACCGTGACGGATAAGGGGCCTCCAAG
CGTtttgttttgactgttttttGAATACGTATATCAGTGTCTTGAAGATG
CGAAAGTCGGACGCCGCCTCTTCGTTCAGCAAACGGTTTTTCTTCTCGCT
CGtgaataaaaatttccaaattttttatttcgattctTGGTTTGAAAGAG
TAACTAATATAATCTTTGGTAATTTCGGTGTTTTTGTTGATTGGGCCATT
GAATTGAACACAATTAGTGAAATTTGCAATGGGCCTCCATAAGAGTAACT
CGGTCATTGCATCACAGTCACCTTTACATCTTAATTCAAACAGATGACCG
AATACTACAAAttcaaatgtaaatttatgcaaaaggACCTCTTTTTTAGC
TTCCCCATTTTCTTGACAAGGATCTCCGTCAATATTGTTTAGAGCCGTAT
ATTTTGCGACTGGGCGTTTACAATATAAAAGTTTGGAACGATGTTCGTTT
GTGCAAAGTGTGACAGTCGGGAAGCCAACTTCATTATCAATAACTTTGTT
TTCATCCATGAAGGTTTCCTTGTTAAAATAACTTTCAACTTGTTTTCGGA
TGAGAAAAATTGCTACACCCAAACTTAAAAGGAGATTGATAAGCCAGAAT
ATTTGTTCCAATTTGGTACCGTGAAAAACAAGCGATAGACCGTGTATAGC
GAACGATTCGGAATATTCCCGTTTCTTCTTTTGTAGGATTTTGGATCGCG
TTATTGACTTTTTGAGGGTGGGTAGCATCACCATTTCTAaggacaaaaaa
g Run BLAST on NCBI transcript from alignment at scaffold_339:98464..99364+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060236 ID=TCONS_00060236|Name=TCONS_00060236|organism=Clytia hemisphaerica|type=transcript|length=901bp|location=Sequence derived from alignment at scaffold_339:98464..99364+ (Clytia hemisphaerica)
CAAAAATCAAAGGTGTCTCCACAGGCTTTAAAACTTTCGACACATCTAAC
ACTCTCTGCACATGCTTGTGTGCTGTATGCTCCAGGAAAAATATTGAGCT
GGCTCCCTTCTTCCTCTGTGATGCACCGTGACGGATAAGGGGCCTCCAAG
CGTtttgttttgactgttttttGAATACGTATATCAGTGTCTTGAAGATG
CGAAAGTCGGACGCCGCCTCTTCGTTCAGCAAACGGTTTTTCTTCTCGCT
CGtgaataaaaatttccaaattttttatttcgattctTGGTTTGAAAGAG
TAACTAATATAATCTTTGGTAATTTCGGTGTTTTTGTTGATTGGGCCATT
GAATTGAACACAATTAGTGAAATTTGCAATGGGCCTCCATAAGAGTAACT
CGGTCATTGCATCACAGTCACCTTTACATCTTAATTCAAACAGATGACCG
AATACTACAAAttcaaatgtaaatttatgcaaaaggACCTCTTTTTTAGC
TTCCCCATTTTCTTGACAAGGATCTCCGTCAATATTGTTTAGAGCCGTAT
ATTTTGCGACTGGGCGTTTACAATATAAAAGTTTGGAACGATGTTCGTTT
GTGCAAAGTGTGACAGTCGGGAAGCCAACTTCATTATCAATAACTTTGTT
TTCATCCATGAAGGTTTCCTTGTTAAAATAACTTTCAACTTGTTTTCGGA
TGAGAAAAATTGCTACACCCAAACTTAAAAGGAGATTGATAAGCCAGAAT
ATTTGTTCCAATTTGGTACCGTGAAAAACAAGCGATAGACCGTGTATAGC
GAACGATTCGGAATATTCCCGTTTCTTCTTTTGTAGGATTTTGGATCGCG
TTATTGACTTTTTGAGGGTGGGTAGCATCACCATTTCTAaggacaaaaaa
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060236-exon-scaffold_339-1491911889:98464..99364 | TCONS_00060236-exon-scaffold_339-1491911889:98464..99364 | Clytia hemisphaerica | exon |
| TCONS_00060236-exon-scaffold_339-1510915933:98464..99364 | TCONS_00060236-exon-scaffold_339-1510915933:98464..99364 | Clytia hemisphaerica | exon |
| TCONS_00060236-exon-scaffold_339-1575043694:98464..99364 | TCONS_00060236-exon-scaffold_339-1575043694:98464..99364 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:98464..99364 + |
Blast
The following BLAST results are available for this feature:
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