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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005941 ID=TCONS_00005941|Name=TCONS_00005941|organism=Clytia hemisphaerica|type=transcript|length=420bp
TTAGTACTTAGGCTGTATATTATTTGGAACATATAACATTATctttaaaa
atgaataaaaagataataagaatCTCCTTTGGTACATTCAAGgtcacttt
aaaaaaatgtcaCTATGAACAATGGGATCCATTGTTgctaaaaagaagaa
gaaagaaactAGTTCTGGGGCTCAGGATAGTGCTGGTCAATCAAGGGGAG
CTCAACCACCTGGAAGTGTTAGCCAAAACAATAATAACCACCCTCCAAAG
CAAGAAGTTTCTGAATGCAAAGAGGAACCAGTTCAACAAGGAATTGATGA
ATCTAAAGAACAACccattaaaataattaaaacagTCAAAGCACCTGAGG
CAAAAGCAGAGGAAGTCAAGTTATCTTTTGAAGAAGTTGTAGCTTTGAAG
CCAACTTCCCCTGATGAGAT Run BLAST on NCBI transcript from alignment at sc0000061:686987..688583- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005941 ID=TCONS_00005941|Name=TCONS_00005941|organism=Clytia hemisphaerica|type=transcript|length=1597bp|location=Sequence derived from alignment at sc0000061:686987..688583- (Clytia hemisphaerica)
TTAGTACTTAGGCTGTATATTATTTGGAACATATAACATTATCTTTAAAA
ATGAATAAAAAGATAATAAGAATCTCCTTTGGTACATTCAAGGTCACTTT
AAAAAAATGTCACTATGAACAATGGGATCCATTGTTGCTAAAAAGAAGAA
GAAAGAAACTAGTAAGATCATGCGTCTTGATTATTTTATACATCAAAGTT
TATTATTTTTCCAATTCAGTTGAATTTCAAACACCCAAATTTGGAAAAAA
TAATTCACTTCTAGAACCTTAATAATAAAAGTACTGCAAATTTATGTACT
GTATTGTTTTTTCTTGGTCAAACCAACGAACAGAAAAATTGAGAAAACAT
TTTAGAGGATCATATGATGTGTCATATTTTTTTGTACAAGAAACCTTCCT
TACCAGTTTACTAAGACCAGTAAAAGCACAAAGATAATAAAAGGTTTAAC
AATAATTATTATTACTTGATATTTTTAGGTTCTGGGGCTCAGGATAGTGC
TGGTCAATCAAGGGGAGCTCAACCACCTGGAAGTGTTAGCCAAAACAATA
ATAACCACCCTCCAAAGCAAGAAGTTTCTGAATGCAAAGAGGAACCAGTT
CAACAAGGAATTGATGAATCTAAAGAACAACCCATTAAAATAATTAAAAC
AGTCAAAGCACCTGAGTAAGTTGATTTCCAAAAAAAATTTATCAAACTTT
AATAAAGCACAAGGAGTATGTATTTTATTGGAAACTTTTTAAGACTTTTG
CCCTCAAGTAGAATTTGTATGTATTTAGTCACTTTCAACAAAGAAACAAT
TAAACAATACTAGGAAATATGGATAGTCTTATTTGTTGATACCCCACAAT
AAATAATATCATGGCTTCAAAAATAAGGAAACAATTTGTACGATTTTTGT
TGTTTTGATAATTGCACTTAAAATTAACATCATGATAGATATATAAACTG
TTTTATTTTTTATTTTTCGAAGTTATAAATTTCATTTTCAATTTTCAATT
TATTTAATTTTGAATGATGAAAAAGGATCAAGTTCTGCTTTCTTTGAATT
TAACGCTTTTTTTATTCATATCTGTTTGTATCTGTCTAAATCTGCACAAA
AAATATTAAGGTTTGTTTCCAAGAAACGGGGCTTGTATGAGTGTAATATC
TAAAGGTTTTATAGAAATGGAGTTTTTCATGCAAAGATGTGAATTTTTAT
GAATTTCTACAGGATGGTATAGGTTCTTGAAAGTCTTGAAAACTAGACAA
CCTGTTTGCATTTTTACTTTGCTATGACTCAAATTATTTCCCTTTTGTAA
AGAAAAAACTACAAAATTAATTTTCGAAATGCATTGTCAAATTTTAAATC
GTTGGTTACTTATATTCTCAGGAACACCGCAAACTCTCTCATAAGAGTAT
ATTTTTAAAAACCTTGAAAAAGATCCAGGATAAAAATCTTAAAAATATGT
AAAAATCCTTGGGGACATTGGAAGTGGGTATAAAAAGCTCTATAAAAACC
ATGTTTCTTTGTTTTTCTTTTACAGGGCAAAAGCAGAGGAAGTCAAGTTA
TCTTTTGAAGAAGTTGTAGCTTTGAAGCCAACTTCCCCTGATGAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005941-exon-sc0000061-1575043694:688423..688583 | TCONS_00005941-exon-sc0000061-1575043694:688423..688583 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1575043694:687919..688105 | TCONS_00005941-exon-sc0000061-1575043694:687919..688105 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1575043694:686987..687058 | TCONS_00005941-exon-sc0000061-1575043694:686987..687058 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1510915933:688423..688583 | TCONS_00005941-exon-sc0000061-1510915933:688423..688583 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1510915933:687919..688105 | TCONS_00005941-exon-sc0000061-1510915933:687919..688105 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1510915933:686987..687058 | TCONS_00005941-exon-sc0000061-1510915933:686987..687058 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1491911889:688423..688583 | TCONS_00005941-exon-sc0000061-1491911889:688423..688583 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1491911889:687919..688105 | TCONS_00005941-exon-sc0000061-1491911889:687919..688105 | Clytia hemisphaerica | exon |
| TCONS_00005941-exon-sc0000061-1491911889:686987..687058 | TCONS_00005941-exon-sc0000061-1491911889:686987..687058 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:686987..688583 - |
Blast
The following BLAST results are available for this feature:
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