TCONS_00059594 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00059594
Unique Name	TCONS_00059594
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2221

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_329:392247..404021-
coding sequence from alignment at scaffold_329:392247..404021-

transcript sequence

>TCONS_00059594 ID=TCONS_00059594|Name=TCONS_00059594|organism=Clytia hemisphaerica|type=transcript|length=2221bp
ATAAAAACACACAGTTATTCTTTAATTGGTTTGCTCTAGCCCATTTCTCA
GTTCGATACCGATTTCAAAGGGCTTCACATAACAGAACTATTATACTATA
AAAGGAGCACTGATTTACTCATACTCAAACAGTTAAACAACATCATAACA
CGGATAGATAAAGTTCAATCAACATGATTTCTTTTCATCTCAAGTTTTTA
CTCTACGTAACAACCTTCTTGGATCTACTGTTATTTTACAAGTGCCAGCA
AACATGTGATCAATATGCAGAAGCTGCTGGTAACACCCAAGTCCCGAACC
CAATTCAATGTACTGccaCTTCAGTGTATTATTTCACACCACTGGAGGAG
TCTTTTGAAGATGCAAGAAAAACATGTCAAGACCTTCCACCGTTTAATGG
AGTGCAATTTGATCTTGTTGTTATTGAGTCTCAAGAAGAATTGGATGTAA
TCGTTACCTTGCCACTAAgactcTCTGTTTTTTATCGTCTCGGATTGATG
GCAAATTCAATATCAAATCCAACATGGATAAATGGGGCGCCGTATACTTT
GGGTGTTGAGCCACCAGAAGATGGTTTATGTTTGGAGTTTTCTCAAACTA
CTGAAATCCCAGCGCAGCTAGTGTTTTCCACATGTGAAATACCTAGGTTT
ACTATATGTGAACCATCATTGCCATATATTCCACCATCAGAAGCTTGTAA
TGAAATAAAGAGTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAA
TTTCATGGGAAGATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTT
GCAACCATTCAATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGC
TTCCTTAAAcaCTTTTTGGCTTGGTCTTATTAACAATTTGAGCAAGAAAA
AATTCCAATGGATTGATAATGACAATTCAGCTTATCGAAGTTGGTGTGAT
GGAAGACAACCACCTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTTTCCC
ATCCGAACAAACAACAGGCTGTTTTGATCTGGTCGACTGTGATGAATCAC
ATAACTTCGTTTGTGAAATCCAAACTGGTTGCAATGAATATTGTTTACAA
ACACTTACTGAAAGCATCTCAAAAAGCcttcaaaaatcaaagaatGATTG
CGCATCTTGCAGAATAGAATGAAACAACAATCTGCCATGAAAAGTGTCAT
TTTCTATTTATGATATTggtactttaatcggattaacttttgcaagatta
aatttcgcaaaacTCGCAaaaacgcgtgagattcctgactttgaaaaaat
aaatccaccacgaaatttttaaaatcgcaTTTTCGGCAAAGAAACCAGTC
CAAAGTCTACATGGCAAAAAATGGTTTAATCTGTTTCCAGGCTTActcac
gaaattaaatccaaGCGAAATTTCTCTAACTCTGacacgcgaaattaaat
tcagaaaatttcgcggtttttctcGCTCATGAAAATTAAtcttgcgaaaa
ttaatccgattaaagtatttcAATCCGAAAAAAGATTTGCCGACTTATGA
AGATTATTTATCAAGTAATTTCAAAAGGGAAGGAATGGGTATTTCTTTCC
AGATTGTTCCcctttttgtaacccttagcaggactaaaagcgataaaaaa
agaagcaaTAAAGCAATGGTggtaaaatagcaaaaaataaaaacttgaaa
gTCTGAAAAAATAACTAAACGAAAAGCGAGAGTTGCATTATCTCGGAGgg
aggtacttaggcaaaattgggtatgggAACGTGCCTCTTGACATGGTCAC
TTTTTTGGCTGTAAAATATGTAACAGGGTCCCAAACTTACTAATTTTCGA
GATGTGTATCagacagggtcgacttttggttattttttgacatattttaa
tTAGAAGATtagaagttttttcaatttttcgtctacttttagtaATTTTT
GACCCTTTTGTGGATGAACAACACAATGTTTCCTTATGATAGGGTCCCTA
ACTTACCAAAAATTTCATATCCGGTAGGGTTTACTTCTCAAACCCCAGAC
ATTACCCTTCATTTACCTTGGTAGAAAGGGTTTGTAGTTTTATTTATAAT
ACGATACTATCCGTCGCACGTCACGTCGCAGCCGCCGAGAAGTAGATAAG
TTTAACGCATCATAaaccctttggatggtgggagGGTAAATAGATCTGTT
TTGTAAGCCCAAACAACGAAA

Run BLAST on NCBI

protein sequence of TCONS_00059594-protein

>TCONS_00059594-protein ID=TCONS_00059594-protein|Name=TCONS_00059594-protein|organism=Clytia hemisphaerica|type=polypeptide|length=332bp
MISFHLKFLLYVTTFLDLLLFYKCQQTCDQYAEAAGNTQVPNPIQCTATS
VYYFTPLEESFEDARKTCQDLPPFNGVQFDLVVIESQEELDVIVTLPLRL
SVFYRLGLMANSISNPTWINGAPYTLGVEPPEDGLCLEFSQTTEIPAQLV
FSTCEIPRFTICEPSLPYIPPSEACNEIKSQYFIPEENADVQISWEDAQS
ACMEENAKLATIQSLKENLCLFEKFASLNTFWLGLINNLSKKKFQWIDND
NSAYRSWCDGRQPPLGSEGCVVVRFPSEQTTGCFDLVDCDESHNFVCEIQ
TGCNEYCLQTLTESISKSLQKSKNDCASCRIE

Run BLAST on NCBI

transcript from alignment at scaffold_329:392247..404021-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00059594 ID=TCONS_00059594|Name=TCONS_00059594|organism=Clytia hemisphaerica|type=transcript|length=11775bp|location=Sequence derived from alignment at scaffold_329:392247..404021- (Clytia hemisphaerica)
ATAAAAACACACAGTTATTCTTTAATTGGTTTGCTCTAGCCCATTTCTCA
GTTCGATACCGATTTCAAAGGGCTTCACATAACAGAACTATTATACTATA
AAAGGAGCACTGATTTACTCATACTCAAACAGTTAAACAACATCATAACA
CGGATAGATAAAGTTCAATCAACATGATTTCTTTTCATCTCAAGTTTTTA
CTCTACGTAACAACCTTCTTGGATCTACTGTTATTTTACAAGTGCCAGCA
AACATGTGATCAATATGCAGAAGCTGCTGGTAACACCCAAGTCCCGAACC
CAATTCAATGTACTGGTAAGGTTTATCTATTATTAATTATTTTCTGTATT
TTATCTCCACGATTCTTTTAGTGCACCTCCCTAAATTATAAGTAAAGGGG
TAAAAATGCCATTTTAAGGTGTTTACTGTAAGTCTTCATTTCAACAACAG
CTAATGCAACCTAAAAAAAATTTACGTTAAGGGACATCAACTCATTCGGC
CATTGGGGAGAAGTGCCTTAGGAACCCCGAGTGAGAGTTTTTGATTACTT
TTAGCAGGGACAAAAAAATGGATTATAATTTTCCACTGGGGAATAGTAAT
GCCTAATTACAATATTTCTTCTCAGGCTCAGACCAGCCTGGCATTTGTAA
TTGCTTGCAGTATTCTTTTAAATTCTATTGTTCCGCGCAATTGTTCGGTT
TGTCAAACGCCTAATGATGACAGCGTGTTGGCATTTCGTTGGCATTTGAA
ATGCCATTTGGAGCAAAGGAATCCCCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAATCACCTTTTCAGTAATGACTCTAAAAAGACGA
TTCCTTAAATGCCATGACAGAAAATACAATGGAAAAGCTATTAAAATCGA
CTCACTCATGAGCAAATACCAAATTACAAATGCCAGTTGGTCTAAAGGGC
CCCCCCCAGCGGTTTGCGTAAATGCGTGAATGGGCTTTTTTGGTTGCGTG
AATGCGTGAAAATCGAAAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCTATTGCGTGAATGCGTGAATCTGCCCTGTTT
TTTTGCGTGAACGCGTGAATTTTTCCTTTTCACAGTTTGTAGAAAACCCC
AAGGTGCGCACCTATCCCAATTTCAAGGGATAGGGCCAGAGCCACTGGGG
GCAGGAGGCGGCCATGACTTCACCACGTTTTTGCAAATAAAAAGAAACTT
ATTTCAAAGAAATCTTTACCTATGATGTAGACTTTCGATAACCTGATTTC
TTGGCAAAATTAGTCTGAAATGGAGTCGTATTTAAGCACATCAGAGGGTT
AAAATAGAAATTTTCTCCTGTCGGCGCAAAACATGGTTGCGCCTCCTTAG
TCATTATTTTTTCGGCCCCTACACGTAGGAAATTAATTCGCGAGCCCTTA
TTAAAACCTTTCTTTTTAAATTTTTTTGATCGCCTCGCTCACAAAAAATG
TTCATTCTTTTACCTCATTTTACAAGCTATCAAGCGATCGTACCTTGCCT
CTAACGAATTTAGACTACATTCTTTTTCAATGGTGTTAAATTGAGCATTT
TTAGCCAAACGCGAGTGACAGAAATGCAAAAATTTCCTCTCTGCGTAAAC
AATGGTTGCGCCTCCTTACCCCTGAGCTAAGCGTCATGGTGTCACACTCG
ATGTTTGTTTGACCTATTTTTGATAATGTTTAAGTGATTTTTTGTACAAA
AATTCGCCTGCGGCGCATATCTTTTCACTTACTATCGCGATACGTTAACT
GCGGAAGCTTCACCTTCTTCAAACGATCGTGAGGAGAAGGTGAAGCTGCA
AATATTTTGCGCGATGGCATGTGATTAAAGTTGAAAATTACGTAACGCTT
TCTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATCGAACGTTTTACTC
CATAATGGCGGAAATTACGTAAATTACGTAACTTAGCGAAATGTGCAAGA
CCTCTATTTTTGACATTTTCCCCAATTTTTTCCGAAAATTTCCCCGATTT
CCCAAAAAATTGGGTTTGCGTGAATTTCGAGAAAAACTTGCGTGAATGCG
TGAATTGCGAAAAATTTTTNATTGGGTTTGCGTGAATTCCGAGAAAAACT
TGCGTGAATGCGTGAATTGCGAAAAATTTTTGCGTGAATGCGTGAAATTT
GGGTCCGCTGGGGGGGCCTCTCTAAACGCAGCCTCAGATGAGAAAGACCT
CTTACGATTTACAATATTTATCACACTTTCATTCAACCTCGTATATACAA
AAATAGATTAGTTATTTGATCTATTCTCTTTTTATGATTGATGATGAGAT
TATCTCCGAGGGTCTTCTTATTTTTATCACCTTTAAGAGGTAATTATTTG
AAAAGATTTAAGGAATTCATGACGCAATGTTTTATACGTAAGCACCCAAA
ATATCGAATATTTGTTAAACTAAATGTGAGATTAGTTACAAACACCCGTT
TTTTATGTTTTTTTTTATGATTCAATATATTATATCATGCACGAACTGAG
TAATGGGAGTTTCTAAAAATCGACCAGAAATGGAGACCACAACCAGCGAC
CACGACCGGCGACCAGATAAATTTGGATTATCGAGTTTATCTACTCTCTC
CTCCGTAGAGAATGTTTAAATCAAGTCCTCAGAATACTAAAAAGTGACCT
TTGAAGCAACCAGTCATTTTCTTGACAGAGTGTCACTATTTAACAAAAAT
ATTAACATGGTCATTAAGTATGATGTTTAAGCTTTGTTACACCAAATATT
TTAATTATGCTGAATGAAATGCCTTTAGTGTGAATAGATAGAACTTGCCA
GTAGGAAAAAATTGGGAAGGCCAGTTTTATTTTAGCAGGTTTTAGAGATA
CGAATCTAATCATCGATCATTGATTCTTTTATGCTGACAAATGACTATTT
CGGCAGAAATAACAATCTAATGATTAAATACAAAGCTTCTCAAACCATTT
TATAAAAAATTTTGTGCCACTTATTATTTTGATGCTGATAATACAAAAGG
ATAAAAGTTGACACCATGATCAAGCTCCAAGAGCGTCGAAATGGTTGTTT
TACGTATTTGGCACGTGGCTTTAAATGCTTAAATAGATGAGACAGGGCTG
AGCTTATTTTTCAATATGATATATATTCAAATGATAAGGAGAGATGCTCT
ACGTGTGAGAAAGGGAAAAAACTCGATAACCCAAATTTATTTGGTCGCTA
GTCGTGGTCGCCGGTCGAAATGCATTGTATATTACCATTACATCAAAGAA
ACAAATCTCTCTATTTTAAAGTTCTTAGAGCAACAAAAAAATGAGGAAAT
TTAATTTGTTATTTTTGTTTTCAGCCACTTCAGTGTATTATTTCACACCA
CTGGAGGAGTCTTTTGAAGATGCAAGAAAAACATGTCAAGACCTTCCACC
GTTTAATGGAGTGCAATTTGATCTTGTTGTTATTGAGTCTCAAGAAGAAT
TGGATGTAATCGTTACCTTGCCACTAAGACTGTAATAAAATATATATTCT
TACTTTAACCCTTTCTGCGCGAGAGAAATACAGTTTTTGAAAAAATAAAT
TCAAAATATTTAGCAAAAGGTCTCGCGTATGCTTTTTCTAATGGTAGCTG
AGCGAGCTCTTTGGAAGGTTTAGTTCTTTAGATATCCTAGTATGTTCTTT
AGTATGGAAAACAATCTTGTTCCAAGAGTACTTTTCAGAGTTTTTTTCCA
TATTACATACGCTTTTCTTTATAAAATTATACTTTATAAGAATATTCAAA
ACGAAATCGGTGAAAAAATATTCAGAATATACTAAAATAGCGCCATATGG
AATTTCACAACAGAACCTAAGAATGCCATTTTTAACTACAAGTTGCCAAC
TGTGCCCCAGAGAGACTCTCTCAACAATGCCATGTTTATACTTAACGTAC
CTATATTACATCACCTCCTTCTCACAGACCTGGTAGGATTTTTTCAGGCA
GAAATAACAGACTGAAACTCGATGGGTTTGATATTCCCGTATTATTTATG
GCTGGGGATTTAAATTTCATTGTTTTCAAGCCACAAAAAACAGTGTGGAT
GGAAATAATCAGCATAGTACATTTTGAAGTGAGGATAGCTATATTAGATT
ATTTTCAGCGGGGACAAAAATTGTTGTCTAATTTTCCACTGGGCACGATA
TTATGGTCAATTTTTCCAGTGGAAAATGCATTCCCATAGTCTGTGAGAAA
GGGTTGTTTTCTTTGGATCGGTTTACATCTGAAGGGGAGAATCGATTAAG
TATCCCTTTTCAATAAGAATTTACAACATCAACACAACACAAGCTTCAAG
TTACTTATGCGAATTTTTTTCTAAACGTAATCGATTGTTCCCTCGTTAAG
GCCNAATCAACTCCGAACCCATCAGCCAAAAAGAAAATCGTTTGTTTGTT
AGTATTGTTATTAGTGAGGTTAAGTATACCGGGATAATCACGACGACGGA
CGAAAAATGTAATAGGCTAGTGGAAATACGAAATTTGATTGATTGAAACT
CACTAGCCTGTTAAATTTTCGTTCGTCGTCGTGATTTTACCGATTAACTT
AACCTCACTATTGTTTCAAATTCTAGGTTTTGGTATCTCTTAACTCTAAA
CCCTATTCAACCTAGGCTTTTAGGGGCGGTTCAAAACTAGGGGGAGCTTT
TCCTGTACCACTCCTTAACTTTTTCTAGTGGGTCTTTTTGAATGAAATGT
GGCACACAAAATCCTTTTCACATAAGGAAACTTTTGACAAAAGATTTTTT
TGATGACGTCACTCATCATGCTGCCCAAACTGAGTAAAAACCGAAAATTT
CCTTTGTTCTTATAAATAGCTATTGTATTCTAACCAAGGTTTTAGAAAAA
AGTAGCCTGAGCTTAAAATGCTTATTTTATCCTAAAGATTAAAAAAATTA
CGATTTTAACGATATATTTGACTTAAAAAATAAATTTGTTTCCCGATGTT
TCAGCTAGAAATTTTAATCTGTTCTGATTAGGGCTTCTTAAATCTATCGG
CTAGAAATGAGGATGTGCCCTCGAAAAAAACATTCTGTGAAAAAAAATTC
GAGTTAGCTTACTAGAAAAAGTTTTTGCGAAAAGTAACATTTGAGTTACT
TCTAACTCGAAAATCCTTTATTGAAAATGAAAAATCGAGTTAGAGTCGAG
TGACCTCATAATTTGCACTTTTATGACGTCATAATTTAGCTAAGTCGAAA
ATTCTTAACTTGAAAATTGCTAACTCGAAGTTTTTTAATTCGAAGATTCC
GGGCCTCCGTTTTGAATGCCAAAATGTTTGAAAGGCAATTTTTCTTCATT
TTTTCAACGTGACGCAATCTTTATTACATTTCTTAAAGATAAAAAGATTT
CTGTGAAAAAAATTTTGCGTGGAAGTACACTAGTTGGTCTTTGCGAAAGT
GAAAAAATTAAAAATTTGGTGTTTTACTCCCATTTGAAAATTGAAAAAGT
GTTCGCAATTACCCGTCGGTTGTAATTAGCCAGCATGACTCTTTATCTCT
TTGTCAATTTTTACTAAAAAAAGGAAATTTATTCATGCTAGTCTGTTGCA
GCTAAGGAGAATTGTATCAACATGATATTTAAAGTACTGAGCAACAAATT
GTGTATATTTTTCTGAAAATAGTAAAATTTTCATATGAAATTTATTTTAG
CTCTGTTTTTTATCGTCTCGGATTGATGGCAAATTCAATATCAAATCCAA
CATGGATAAATGGGGCGCCGTATACTTTGGGTGTTGAGCCACCAGAAGAT
GGTTTATGTTTGGAGTTTTCTCAAACTACTGAAATCCCAGCGCAGCTAGT
GTTTTCCACATGTGAAATACCTAGGTTTACTATATGTGAACCATCATTGT
AAGTTATTTATTTACACTTTTTTTATAAGAACCAGTAGAATTTTGGCTGT
TCTTAATTTTTAGGAACTTTTGAGCCTCAAATTGTTCTTATTCCGTTCTT
ATTTATAGGATGTAATTGAGGTATTTTAGGCGTTATATCCTATATTTATA
CTACTTTGACCCCTATATTGCGTGAAATCGAGTAATTTAAGACTTAGCAT
TGTTCTTAAATTATTCTTATATTTTGGTGATTATGGGGGCCCCCCCAGCG
GTTTGCGTGATTGCGTGAATGGGCATTTTCGGTTGCGTGAATGCGTGAAA
ATTGAAAAAAAAATGCGTGAATGCGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATTTTTTG
CGTGAATACGTGAATTTTCCCTTTTTTCCACCGATTATGTGCAGTTTTCC
CGATTTTCCAATGTTTCCCCGATTTTTCCCAGAAAATTTTCCGATTTCTG
AAAAATCGGGTTATTGCGTGAAACTCGAGGAAAACTTGCGTGAATGCGTG
AATTTCGAAAAAAATTTGCGTGATTGCGTGAATTGAGGGTCCGCTGGGGG
GGCCTCATTATGAGCCTCGTTGTTCTCATAAAAGTGTTATTTTAAACAAA
AAGTGTAAGGTGTATTTTCATTAAATTCATATTGGTCATTTTCAGAAAAG
ATAACCATTATATTTGAGGTGGAAAACCATCTATAAATTAATACGTTAAA
ACGTGTGTGTTTACAGCGTTTTTTTTACAAAGTTTTCGAAAATCTAACAA
AGCTCTACAAAGCCTCCTCTTCATGGTGTTGAACCATCGTCATTTTGCAC
CTTATGCAGAGTTCCTACCGCTAGACTAACTTTGAGACAGCAAGATACTA
TTTTCTATACAGGCCTGAATATAATTTTTGCTGTTGAAGAATTCTTATTC
AGATGCTCTTTATAACTTTCTGCTTACAATAGCTCCCTATCACTTTCAAA
ACTCGCACGCCGCACGCTGTGTGTCCCAATCCAGCGAATCACTATATATA
TAAAAAACTCTAAAGGAAGAAAGATAGCTGCCGAAAAAATGATACGATTT
TCATTTTATGAAAGAAAGGAGAAAAAAGATAACATTGCATTGCAATTTGT
AACCACAATTAAACCTTTAGAAGCTGAACGACGTACCGCGTATGTCATAT
ATATAGGCCAAATGACGTACCACGTACGTTTTGAGAGTGGCACCAATTGT
CGAAAAAAGTGACAAAAGTGAAAAAAGTAGAATTTTTAGGCAAAGTTTTG
ACTTGAGCTATAGGAAAAACTGTTTATTTTTACTTCTTTTTTAAAATTCT
AGTTGAAAGAAGAATTATTCTGGTTTCCAAAATTGGTTTACTTTTTACTT
AAGCTTTAGCGAATCAGATTTTATGACATTTTCCGTGAAACCTCCATTTT
CATGAAAAAAAAACAACAGCGGCAGCAGNTTTTTACTTAAGCTTTAGCGA
ATCAGATTTTATGACATTTTCCGTGAAACCTCCATTTTCATGAAGAAAAA
AAAACAGCGGCAGCATTGCGCGCTGTTTTTAAAAACAGCGGTGTCTAAAG
GTTAAGTAAATGGCTTAGCAGAATTTATTGGTCCAGCGCGCAGCAGAGAA
TGGACCTTTAAAAAGCAACTGGTCGAAAAGATTTTGTCTTTGTCCAGGCT
AAACAAGTCCAAGCTAAACCAACCGCCGATCTAGAATTTTTGCCCCGCCT
ACCCGCGCGATGTTTAACCTATGTTTTGGATTGAATTGGTAGTAGAGTCA
AATTTCCCGGTTAGATTAAAGGGTTGTTTCAGGTAGGGTCAGGTAGGGTT
AGGGCTAGGGTTGGGGATGGGAATTAACCCCTGGTTAGGGTTTTAGCCCC
CGGATAGAGTTTGGAGTAAATACCATGTTTACAAGCAACTTTGAACTCCT
TAATGCAGTTGTGACTCGATGGCCGAGTGGTTAAGGCGCTGGCGTTCTAA
TCATAGATGCTTTGAATATAGTGGGTTCGAATCCCCTAAGCTGAAAATGT
TTCGAATGTTTCGGGAAATGCATCAAAAACTTTCAAAAATCAAAAATTAG
CTATGCAAAGAAAGTGTCAAAGAATAGAAGCTCAGAGTGGAGGATGGGAA
GGAAATTTTTTTGTGTCACTTAAGGAACCCGGTACGAACGACATTCGGTT
ATTGCCACGTCAGCTGGACCTTCACGCCGCTCCGGCTTCTTGTTTTAGAT
CTAATTAGCCATCGTGGCTAGCCATCGTGGATGGACATACTTTTAAAGAC
TTCAAAGACTTTGAAAGACTTTAAAGTTATATACAGCTTCTGAATAAGAG
TTCTTCAACAGCAAAAACTATATTTGGGCCTGTATAGAAAATAGTATCTT
GGCGTCTCAAAGTTAGTCTAGTGGTAAGAAATCTGCATAAGGTGCAAAAA
CACGATGGTTTAACGCCGTGATGAGGAGGCTTTGTAGAGCAAATTTTAAG
CAAAAAAATTGTCACTATTTATCGTGATATTTTTAGCGAAAAATTCTCGA
TTCAATAGGGTACCCTAATGGCACTCACATCTACCCGTCAGCTGTTTTCC
AACTCCCCCCTTAGCGATGACATATTCTAATTTCCCCGTGCTAAAAAGTC
GGTAAAGGTTTGGGGTAAAATAGGGTGAACCTTTGTCTACGCTCAAATAA
GAGAAAATGTGTTTTGGCCGAAATACCAGGAAATACCTGGATTTATTTAT
TTTCTTTCTTTCTTTATAGGCCATATATTCCACCATCAGAAGCTTGTAAT
GAAATAAAGAGTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAAT
TTCATGGGAAGATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTTG
CAACCATTCAATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGCT
TCCTTAAAGTAAGATATTAAAGATAATTGTTTCTTTATCGCGGCTACCAA
TTGATTTCTGTCAGCACTACATTTCTCTAAAATTTAACCTTTGGCGACGC
GATGTAAAATATTCATTTCACACGTCTCAATCACATCACCATTGAAAGAA
TTAACGGATGAGTTTCCTTTGAAAAAGATCCTTTCAGCACAGACTCCGAA
GTGTGTAACAGTAATTAATCAGCCTTTAACTTCCTAATTTGGTTCTTGAT
TCTAGAAAAGAACTCCATTTTTTGTCAGAACCAGTGGGATTTTTTCAACC
AGTAATGCAACCAGTAATGACTGAAACTTTCGGATAATACTCACTCTAAG
GGTCGATTTACAAACTTTGGCTCGGACATAAGTACCCGTCATCTCGCAAA
CCTAGTACCCTGGGGTCACCAACAGGCTTCTCGAATTTCTGTTTACCCAG
TTTCTACACTACATACACTACTGAATTCATGTATACAGATGTACAGATGG
TAAGAAACGGGATTATGGCCTTACTTAGAAAGAGGATAAATCTAATTCTT
TTTGTTTTTTAAGCACTTTTTGGCTTGGTCTTATTAACAATTTGAGCAAG
AAAAAATTCCAATGGATTGATAATGACAATTCAGCTTATCGAAGTTGGTG
TGATGGAAGACAACCACCTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTT
TCCCATCCGAACAAACAACAGGCTGTTTTGATCTGGTCGACTGTGATGAA
TCACATAACTTCGTTTGTGAAATCCAAACTGGTTGCAATGAATATTGTTT
ACAAACACTTACTGAAAGCATCTCAAAAAGCCTTCAAAAATCAAAGAATG
ATTGCGCATCTTGCAGAATAGAATGAAACAACAATCTGCCATGAAAAGTG
TCATTTTCTATTTATGATATTGGTACTTTAATCGGATTAACTTTTGCAAG
ATTAAATTTCGCAAAACTCGCAAAAACGCGTGAGATTCCTGACTTTGAAA
AAATAAATCCACCACGAAATTTTTAAAATCGCATTTTCGGCAAAGAAACC
AGTCCAAAGTCTACATGGCAAAAAATGGTTTAATCTGTTTCCAGGCTTAC
TCACGAAATTAAATCCAAGCGAAATTTCTCTAACTCTGACACGCGAAATT
AAATTCAGAAAATTTCGCGGTTTTTCTCGCTCATGAAAATTAATCTTGCG
AAAATTAATCCGATTAAAGTATTTCAATCCGAAAAAAGATTTGCCGACTT
ATGAAGATTATTTATCAAGTAATTTCAAAAGGGAAGGAATGGGTATTTCT
TTCCAGATTGTTCCCCTTTTTGTAACCCTTAGCAGGACTAAAAGCGATAA
AAAAAGAAGCAATAAAGCAATGGTGGTAAAATAGCAAAAAATAAAAACTT
GAAAGTCTGAAAAAATAACTAAACGAAAAGCGAGAGTTGCATTATCTCGG
AGGGAGGTACTTAGGCAAAATTGGGTATGGGAACGTGCCTCTTGACATGG
TCACTTTTTTGGCTGTAAAATATGTAACAGGGTCCCAAACTTACTAATTT
TCGAGATGTGTATCAGACAGGGTCGACTTTTGGTTATTTTTTGACATATT
TTAATTAGAAGATTAGAAGTTTTTTCAATTTTTCGTCTACTTTTAGTAAT
TTTTGACCCTTTTGTGGATGAACAACACAATGTTTCCTTATGATAGGGTC
CCTAACTTACCAAAAATTTCATATCCGGTAGGGTTTACTTCTCAAACCCC
AGACATTACCCTTCATTTACCTTGGTAGAAAGGGTTTGTAGTTTTATTTA
TAATACGATACTATCCGTCGCACGTCACGTCGCAGCCGCCGAGAAGTAGA
TAAGTTTAACGCATCATAAACCCTTTGGATGGTGGGAGGGTAAATAGATC
TGTTTTGTAAGCCCAAACAACGAAA

Coding sequence (CDS) from alignment at scaffold_329:392247..404021-

>TCONS_00059594 ID=TCONS_00059594|Name=TCONS_00059594|organism=Clytia hemisphaerica|type=CDS|length=4995bp|location=Sequence derived from alignment at scaffold_329:392247..404021- (Clytia hemisphaerica)
CACTTTTTGGCTTGGTCTTATTAACAATTTGAGCAAGAAAAAATTCCAAT
GGATTGATAATGACAATTCAGCTTATCGAAGTTGGTGTGATGGAAGACAA
CCACCTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTTTCCCATCCGAACA
AACAACAGGCTGTTTTGATCTGGTCGACTGTGATGAATCACATAACTTCG
TTTGTGAAATCCAAACTGGTTGCAATGAATATTGTTTACAAACACTTACT
GAAAGCATCTCAAAAAGCCTTCAAAAATCAAAGAATGATTGCGCATCTTG
CAGAATAGAATGAGCCATATATTCCACCATCAGAAGCTTGTAATGAAATA
AAGAGTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAATTTCATG
GGAAGATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTTGCAACCA
TTCAATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGCTTCCTTA
AACTCTGTTTTTTATCGTCTCGGATTGATGGCAAATTCAATATCAAATCC
AACATGGATAAATGGGGCGCCGTATACTTTGGGTGTTGAGCCACCAGAAG
ATGGTTTATGTTTGGAGTTTTCTCAAACTACTGAAATCCCAGCGCAGCTA
GTGTTTTCCACATGTGAAATACCTAGGTTTACTATATGTGAACCATCATT
CCACTTCAGTGTATTATTTCACACCACTGGAGGAGTCTTTTGAAGATGCA
AGAAAAACATGTCAAGACCTTCCACCGTTTAATGGAGTGCAATTTGATCT
TGTTGTTATTGAGTCTCAAGAAGAATTGGATGTAATCGTTACCTTGCCAC
TAAGACTATGATTTCTTTTCATCTCAAGTTTTTACTCTACGTAACAACCT
TCTTGGATCTACTGTTATTTTACAAGTGCCAGCAAACATGTGATCAATAT
GCAGAAGCTGCTGGTAACACCCAAGTCCCGAACCCAATTCAATGTACTGC
ACTTTTTGGCTTGGTCTTATTAACAATTTGAGCAAGAAAAAATTCCAATG
GATTGATAATGACAATTCAGCTTATCGAAGTTGGTGTGATGGAAGACAAC
CACCTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTTTCCCATCCGAACAA
ACAACAGGCTGTTTTGATCTGGTCGACTGTGATGAATCACATAACTTCGT
TTGTGAAATCCAAACTGGTTGCAATGAATATTGTTTACAAACACTTACTG
AAAGCATCTCAAAAAGCCTTCAAAAATCAAAGAATGATTGCGCATCTTGC
AGAATAGAATGAGCCATATATTCCACCATCAGAAGCTTGTAATGAAATAA
AGAGTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAATTTCATGG
GAAGATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTTGCAACCAT
TCAATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGCTTCCTTAA
ACTCTGTTTTTTATCGTCTCGGATTGATGGCAAATTCAATATCAAATCCA
ACATGGATAAATGGGGCGCCGTATACTTTGGGTGTTGAGCCACCAGAAGA
TGGTTTATGTTTGGAGTTTTCTCAAACTACTGAAATCCCAGCGCAGCTAG
TGTTTTCCACATGTGAAATACCTAGGTTTACTATATGTGAACCATCATTC
CACTTCAGTGTATTATTTCACACCACTGGAGGAGTCTTTTGAAGATGCAA
GAAAAACATGTCAAGACCTTCCACCGTTTAATGGAGTGCAATTTGATCTT
GTTGTTATTGAGTCTCAAGAAGAATTGGATGTAATCGTTACCTTGCCACT
AAGACTATGATTTCTTTTCATCTCAAGTTTTTACTCTACGTAACAACCTT
CTTGGATCTACTGTTATTTTACAAGTGCCAGCAAACATGTGATCAATATG
CAGAAGCTGCTGGTAACACCCAAGTCCCGAACCCAATTCAATGTACTGCA
CTTTTTGGCTTGGTCTTATTAACAATTTGAGCAAGAAAAAATTCCAATGG
ATTGATAATGACAATTCAGCTTATCGAAGTTGGTGTGATGGAAGACAACC
ACCTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTTTCCCATCCGAACAAA
CAACAGGCTGTTTTGATCTGGTCGACTGTGATGAATCACATAACTTCGTT
TGTGAAATCCAAACTGGTTGCAATGAATATTGTTTACAAACACTTACTGA
AAGCATCTCAAAAAGCCTTCAAAAATCAAAGAATGATTGCGCATCTTGCA
GAATAGAATGAGCCATATATTCCACCATCAGAAGCTTGTAATGAAATAAA
GAGTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAATTTCATGGG
AAGATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTTGCAACCATT
CAATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGCTTCCTTAAA
CTCTGTTTTTTATCGTCTCGGATTGATGGCAAATTCAATATCAAATCCAA
CATGGATAAATGGGGCGCCGTATACTTTGGGTGTTGAGCCACCAGAAGAT
GGTTTATGTTTGGAGTTTTCTCAAACTACTGAAATCCCAGCGCAGCTAGT
GTTTTCCACATGTGAAATACCTAGGTTTACTATATGTGAACCATCATTCC
ACTTCAGTGTATTATTTCACACCACTGGAGGAGTCTTTTGAAGATGCAAG
AAAAACATGTCAAGACCTTCCACCGTTTAATGGAGTGCAATTTGATCTTG
TTGTTATTGAGTCTCAAGAAGAATTGGATGTAATCGTTACCTTGCCACTA
AGACTATGATTTCTTTTCATCTCAAGTTTTTACTCTACGTAACAACCTTC
TTGGATCTACTGTTATTTTACAAGTGCCAGCAAACATGTGATCAATATGC
AGAAGCTGCTGGTAACACCCAAGTCCCGAACCCAATTCAATGTACTGCAC
TTTTTGGCTTGGTCTTATTAACAATTTGAGCAAGAAAAAATTCCAATGGA
TTGATAATGACAATTCAGCTTATCGAAGTTGGTGTGATGGAAGACAACCA
CCTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTTTCCCATCCGAACAAAC
AACAGGCTGTTTTGATCTGGTCGACTGTGATGAATCACATAACTTCGTTT
GTGAAATCCAAACTGGTTGCAATGAATATTGTTTACAAACACTTACTGAA
AGCATCTCAAAAAGCCTTCAAAAATCAAAGAATGATTGCGCATCTTGCAG
AATAGAATGAGCCATATATTCCACCATCAGAAGCTTGTAATGAAATAAAG
AGTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAATTTCATGGGA
AGATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTTGCAACCATTC
AATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGCTTCCTTAAAC
TCTGTTTTTTATCGTCTCGGATTGATGGCAAATTCAATATCAAATCCAAC
ATGGATAAATGGGGCGCCGTATACTTTGGGTGTTGAGCCACCAGAAGATG
GTTTATGTTTGGAGTTTTCTCAAACTACTGAAATCCCAGCGCAGCTAGTG
TTTTCCACATGTGAAATACCTAGGTTTACTATATGTGAACCATCATTCCA
CTTCAGTGTATTATTTCACACCACTGGAGGAGTCTTTTGAAGATGCAAGA
AAAACATGTCAAGACCTTCCACCGTTTAATGGAGTGCAATTTGATCTTGT
TGTTATTGAGTCTCAAGAAGAATTGGATGTAATCGTTACCTTGCCACTAA
GACTATGATTTCTTTTCATCTCAAGTTTTTACTCTACGTAACAACCTTCT
TGGATCTACTGTTATTTTACAAGTGCCAGCAAACATGTGATCAATATGCA
GAAGCTGCTGGTAACACCCAAGTCCCGAACCCAATTCAATGTACTGCACT
TTTTGGCTTGGTCTTATTAACAATTTGAGCAAGAAAAAATTCCAATGGAT
TGATAATGACAATTCAGCTTATCGAAGTTGGTGTGATGGAAGACAACCAC
CTCTTGGAAGTGAAGGATGTGTCGTGGTTCGTTTCCCATCCGAACAAACA
ACAGGCTGTTTTGATCTGGTCGACTGTGATGAATCACATAACTTCGTTTG
TGAAATCCAAACTGGTTGCAATGAATATTGTTTACAAACACTTACTGAAA
GCATCTCAAAAAGCCTTCAAAAATCAAAGAATGATTGCGCATCTTGCAGA
ATAGAATGAGCCATATATTCCACCATCAGAAGCTTGTAATGAAATAAAGA
GTCAATATTTCATTCCCGAAGAAAACGCAGATGTTCAAATTTCATGGGAA
GATGCCCAATCAGCTTGCATGGAAGAAAATGCCAAACTTGCAACCATTCA
ATCTTTGAAAGAAAACCTGTGTTTATTTGAGAAGTTTGCTTCCTTAAACT
CTGTTTTTTATCGTCTCGGATTGATGGCAAATTCAATATCAAATCCAACA
TGGATAAATGGGGCGCCGTATACTTTGGGTGTTGAGCCACCAGAAGATGG
TTTATGTTTGGAGTTTTCTCAAACTACTGAAATCCCAGCGCAGCTAGTGT
TTTCCACATGTGAAATACCTAGGTTTACTATATGTGAACCATCATTCCAC
TTCAGTGTATTATTTCACACCACTGGAGGAGTCTTTTGAAGATGCAAGAA
AAACATGTCAAGACCTTCCACCGTTTAATGGAGTGCAATTTGATCTTGTT
GTTATTGAGTCTCAAGAAGAATTGGATGTAATCGTTACCTTGCCACTAAG
ACTATGATTTCTTTTCATCTCAAGTTTTTACTCTACGTAACAACCTTCTT
GGATCTACTGTTATTTTACAAGTGCCAGCAAACATGTGATCAATATGCAG
AAGCTGCTGGTAACACCCAAGTCCCGAACCCAATTCAATGTACTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037484	XLOC_037484	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00059594-protein	TCONS_00059594-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_329	supercontig	scaffold_329:392247..404021 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0152133	0	0	2.41019	0	4.36955	2.60539	0	0	0	0	0.0243992	0.0464355	0	0	0	0	0	0	0	0.264484	0	0.202067	0	0	0	0	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001304	C-type_lectin-like
IPR016186	C-type_lectin-like/link
IPR016187	CTDL_fold

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00059594 vs. Swiss-Prot (Human)

BLAST of TCONS_00059594 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00059594 (transcript) - C. hemisphaerica