TCONS_00059465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059465
Unique NameTCONS_00059465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length116

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059465 ID=TCONS_00059465|Name=TCONS_00059465|organism=Clytia hemisphaerica|type=transcript|length=116bp
attttcttgTTAGAACGTTTGAACCTTTATTTCTGACCAGTTTTGTACAA
TTCATAGTGTTCGATTGAATCTCCCTTTTCTGCGTCCCTTAGTTACTCTG
TTTGGAAATCCTGGTT
Run BLAST on NCBI

transcript from alignment at scaffold_327:218607..218722

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059465 ID=TCONS_00059465|Name=TCONS_00059465|organism=Clytia hemisphaerica|type=transcript|length=116bp|location=Sequence derived from alignment at scaffold_327:218607..218722 (Clytia hemisphaerica)
AACCAGGATTTCCAAACAGAGTAACTAAGGGACGCAGAAAAGGGAGATTC
AATCGAACACTATGAATTGTACAAAACTGGTCAGAAATAAAGGTTCAAAC
GTTCTAAcaagaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037428XLOC_037428Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059465-exon-scaffold_327-1491911889:218607..218722TCONS_00059465-exon-scaffold_327-1491911889:218607..218722Clytia hemisphaericaexon
TCONS_00059465-exon-scaffold_327-1510915933:218607..218722TCONS_00059465-exon-scaffold_327-1510915933:218607..218722Clytia hemisphaericaexon
TCONS_00059465-exon-scaffold_327-1575043694:218607..218722TCONS_00059465-exon-scaffold_327-1575043694:218607..218722Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:218607..218722 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top