TCONS_00059220 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059220
Unique NameTCONS_00059220
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2348

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059220 ID=TCONS_00059220|Name=TCONS_00059220|organism=Clytia hemisphaerica|type=transcript|length=2348bp
TTtagatcaaaaacaaaaaactaaaattagaTAACAATAAATATAAAATC
TTTGGATCAAAATGGCGTTAGCTTCACTTTATGATGGAGTTGACCTTGgc
aaagacaaagaaaaaagtgCCAATTTAAACCCAACCAAAATTGCTGGTTG
GTCAGACAATCTTCAATTCATGAAAACACAACTACAGTTAAAGAAGGCAT
CCACTTCTAAAGGAATCaaaGGTGGAAAATCAGTTTTATCCACAGGGCCT
GGTAATATAACTTTAtcTTCAATAATGGCACCGGCAGACAAACAAGTTGT
TTTGATCGATGAGTACAATCCATTACGACCGAATGATTATAACGACTTCA
AGGTACGCATGCGGGAAAAAGAGGAACGTGAAAGACGGGATAAAGAACGG
CGACGGGAACGGGAAGAACGTGAACGGGAACGCGAACGACGTGATAATAA
AGACGGCAATGACAATCGACGTGATGAACGGTTAACACTCatcataaaaa
ttgaattgcACTTTCTCTCGCTTGTATCCATTCTTCTTATCTTACTCTTG
TCACTTACTCCTAACCTCTTGTAGTCTCTTCCATTCTTCACTTAATCTCT
TGAAGTCTCTAGTAATCAtactttttcatttcatctgctTTTTTTAAGTT
TCTGATAATCCTTGAGTATATACTTGTTGATATAtatcaacaaaatgttt
ttcGTACACTTTTGAATTGCATTTTCTTGCTCTTCTTCTCTAAATTTCCT
CCAAATTTCCTCAACTTTTTCTATTAGGAGACGAAGTCCGCATCGTGATG
ATCAAGACAAAGATCGTGATCGTGACCGGAAACGAAGACGCGATGACGAT
CGTAGTAGAGATTACGGAGGGCGTGCAGCAATCGCACCTCCGCCCTCATT
ACTAGAAACGACGCCTGTGAATGCGGAAATCATCCAAAAGAAGGAAAACA
GTGCCGGAACAGGTGGCTTTTCTACAGGAAATCTTATCGCGTCTCAAATC
ATGGCGAAATACGGTTGGAAAGAAGGTCAAGGTTTAGGTCGTGAAGAACA
AGGTCTATCCACCTGTTTACAAGTCGAGAAAACTGGTAAAAGGGCGGGCA
AAATCATCAACAAAGACGTTGAAAAGGCCAAAGAGAAAGATTCGTTCCCT
CCGCCTTCTTTCCCACCACCCTCCTTTCCTCCACCCATGGGCGGTGCCAT
GGGTGGTGTACCGAATTCACCTTCACAGCCACAACCACCGGACGTTTCTG
GTAATGACTCACAGATGGCGGATCTAATGAAGAACCCATCGAAAGTCGTC
CTTTTGAAGAACATGGTTGGTCCTGGTGAAGTAGATGACGAATTACAGCC
GGAGATTGAGGAAGAATGTACCACAAAATACGGTGATATCATCAAAGTCA
TCATTTTCGAGATCCCCAATGCACAAGAAGAAGAGGCTGTTCGTATTTTT
GTCGAATTCAAAAGAATGGAATCTGCCATTAAAGCTTTGATGGATTTGAA
CAATCGGTTTTTCGGCGGACGATCCGTCTCTGCATCCTTCTACAATGTCG
ATAAATTCCGAAGGCTCGATCTAGCAAGTTGAATGAACAAAATAAGTGTA
CATCTAGGTATCATTCACAACCAGGAAATACAGACAACGCTCTGAAAAAT
GGTGAACTGTTGAAGAACGAgtaaaaagtcaaattaaaaTAAGCAACATC
AGAAATTATGAACTCGTGATCAACTAACTATCAATATCAAATTTGGGAGA
TTTTGACACTTTCTTCTGACGTTACATTAAATCTTTCTATGAAAGCAGAA
GTCGGAAATACGCTATGTCGATTATGGATGATGTAGAGTTCATTGCAAAT
GCCGTAGATTCATCTAAAATATTACGATACAATGATCGACAATTATGAAC
ATTAGATTGAGAACTAGAGAAGTTATTGCTCTACCAATGGTACTGTCGTT
TCTGTAAAGATTCTACTTCCAAAGCTAAAATTGCACTGGTTTTTTATGTT
TCTAATTATTTTTCCAGGCTTACTGGCTGAAAATAGAAAGGGTTTGCTTC
CAGAGCTATGCGAAATAGCATGAGACTGACCAATATTCTGATCTGAAGCT
ACTTTTCCCTATCATGCTATTATTAAAGAGTCAAAACAGATGTGTATCTC
CGTTAAGTGTCCCGATCAGTAGAATCTCAGTTCAAGAAGTGAAATCTTAG
CCGAAATGGTATGTTCTCAAGAAACCTTGTAAATTTTGTAATTGATTTTT
GCACAATAAAGAAATTGTTATAAATGGACTATGATGATTTGAAGTCTTTG
TATCTCATCAACCATCTTTATCAAAGAATACTCTTGCTTTATTATTAC
Run BLAST on NCBI

transcript from alignment at scaffold_32:19616..27322+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059220 ID=TCONS_00059220|Name=TCONS_00059220|organism=Clytia hemisphaerica|type=transcript|length=7707bp|location=Sequence derived from alignment at scaffold_32:19616..27322+ (Clytia hemisphaerica)
TTtagatcaaaaacaaaaaactaaaattagaTAACAATAAATATAAAATC TTTGGATCAAAATGGCGTTAGCTTCACTTTATGATGGAGTTGACCTTGgc aaagacaaagaaaaaagtgCCAATTTAAACCCAACCAAAATTGGTAagca taaaatattttttcaatgtaGTTTTTCTTTCGGTCCTTTTTTTGTTGTAA TATTGACTGCTGGGGGttgatcaaataagagcttgtaaaaactccagctt gtcccggtCATGTCACTCTTTGacaatttcacagaattttcaaaaatctt acacTAAACTTGTTTGGATCTGTTTGGACTGTACTACCCTTTTATCTCGA ACAAAATATTTGATCTTTTAAAAGTTCGAGATAGAGAGGGTACATTACTT TTTNAAAAAGTGCCAATTTAAACCCAACCAAAATTGGtaagcttaaaata ttttttcaatgtaGTTTTTCTTTCGGTCCTTTTTTTGTTGTAATATTGAC TGCTGGGGGGGttgatcaaataagagcttgtaaaaactccagcttgtccc ggtCATGTCACTCTTTGacaatttcacagaattttcaaaaatcttgcaCT AAACTTGTTTGGATCTGTTTGGACTGTACTACCCTTTTATCTGGAACAAA ATATTTGATCTTTTAAAAGTTGGAGATAGAGAGggtttactttctttttc ttttttttcacttttcacttCTTTGCATTTTAGCTGGTTGGTCAGACAAT CTTCAATTCATGAAAACACAACTACAGTTAAAGAAGGCATCCACTTCTAA AGGAATCGTAAGAATCCTTTTATTTTGGtcccggggggagggggcactcg atttctaaacggcggtatgtgccgccaaaaaatgCAGCTTTTCAACATTG AAAAGGcacccttacaatgcattttACCAAACTtctcacccttacagtgt agtttgatttcatatctaATTTTGCTGAAGCCATTTGAAAATGAGCCTGA GCTGTCGACATAAtttgcaaaacaaatcaaaatgagtgCGAGTCGAAACT ATAAATATACATCAGTTTTTTACTATCAGACTTGCAATTCAGTAGTTCct aaacacacccttacagtatAACAGCTCAAAaaagacccttgtagtgcatT TGAGGGTctcaaaaaacctacccttacgggcggcacatgccgtaagtcgg accatatgagtgcacACCCCCATGGGTTTTTGGTTCAAACATTGTTATAT GTTTCTTGATCATTtagaccacgttcacacgcCACGGTTCTGTTTCGCTC CGAATCGAAAAGaaccattctattggttaaatctATTgcttacgtcactt ctaaccagtACAATAGCTTTATTTCTTTTCGGAGCGAACTGAACATCGTC ATAAACTTACTGGTTTTTTCAATGTCTCGTCCTGTTCATATTGATAGATg aattatttctaaattttgcaaacgtttttttttctctttttagaaaGGTG GAAAATCAGTTTTATCCACAGGGCCTGGTAATATAACTTTAGTAAGTATC CTTCGTTGTCGCATTTTGGCGAAGGACCAGTATTGGTACTGGTAAAAGTT AAACCATTGTGATATTGTGATAAAGTAGATTTTTTGCNTTGGTACTGGTA AAAGTTAAACCTTTGTGATATTGTGATAAAGTATATTTTTTGTTACTCAA ACCTCCATATCTCAAATGTTTTGTGGTCCTTCAAGCTATATTACTCTGAA CTTATTCCTCTTAACCATATGGTCATGTAAAAGAAAACCTGACACAGTAA ACAATTCATTACTAGACAAGAAACTACTACTAAGTGCATTTTTTGCCTCC CATTAACCTAAAGATCCCCTACAAGCCAGACTGTTTACAGTGAGTTACGT TGAGATACAGCCACCAAACTCTAAAATAAGGAGTGGAATGTACATCAGCA AATCTAATAACCAATTTCATCCCTCAAGTTACCATTTTGAGACATACGCT ATCTTATCCGCAGCTTAAGTTTTCGAGTTATAAAAGAGGGGTCATTTTTA TTacgttttttttatcttttcagtcTTCAATAATGGCACCGGCAGACAAA CAAGTTGTTTTGATCGATGAGTACAATCCATTACGACCGAATGATTATAA CGACTTCAAGGTTAATAAATTTAATGTCCGTCAAAGTGTTTCTTCTATCA TTTAGTATGATCCAGGTCCATAACAATCACTGTACCATactgaaaatgtt ttcttttacaaactcgaaaaatgaaaagaaaaagatttaaatTCTTGAAT TAGACCAGTGTCCTAGATTCAtaaaaggccttaaaacaggttttcgtaGA GCActccttagatcagggcaaaattttgatattatgctcctataGGGTGT ggagttaatcgatagaacttatcaagagTCCCCCtttacaaaatgttttt ttcgagGTCCGAAAATTAAATATCTGATGCttccaacggattcagcgtga aaagtagataaagaaaaatggggttatttgttaagtttcgaccacttGGT GCcaagaaatggcatttttaaggcgaaaaatcgatgtttttggcgttttc cgatgatgtcagcattttcagaaaaaatatctCCCATAGCTAGATAGCCC tgaatttaaaaatgttatggtttgttaactttcgatgttccgatctcgag atatttgctctaaatattgaaaaaaagaaaagaagagaaaagttttttag catatttacccaccttaacaatgaaatatctcgagatctagacactAGAC CTAGAAACTTAAGgctcaatctcaaaattagtaccttacaaaatttaaaa ttttactgtGGTGTTCACAGTTCTGTTTTGTCATACAGAGGAATACTCAA TGTTTTCCtatgacaaaaaggccaatcttAAAAACAGAAAGAttgaaaga ttttcaattttccaaggcACTTATTTAGAGATTGAAGTTTTAGTCATGTG AACGACGATGTATGATTATCTAAACTAGATAATTGTTGGTACAGATTGAT TTCGAAGACaatcattttttaatattttgctaggttttattctaattttt atttatgCAATTCACTGTAGCTTGGATAACGACGCTCATTGAGAAATGAA ATAACTAAAGGCTTAAGCTTAAAGAATTTATTTAAGAAATTATTTTAAGC CTATGAGTTCCTTATAAATAGGTGAAGATCTCTCAGAATATCCCAGAGTT AGACCTCCCAAAAATAAGTAATAGGTATTTTAGGTTTTACCTGACGAACc tatttcttgaaaaatatagaaatttgGAAATTGACCGTATAAAAACGTCA GACTTTCGAAAATGTCTTGTAAAACCTATGTCTCTGTGTTTAAGATAAAT CTTATGTTTTTATAGTTACAGCTGAATTGgttctaatacacctttttacg GTTAGCTGCTTtgtataaaaagtcaccaaaatttcgagtaagcaaaccat ctcattggctaaaagcaaaaaaaacataaacaaaaaaatgtccagagtaa gagcacagaaagcacatttttctctaggctacgtcatatcctccttcgtt tcgagcgtaaaactcctactcttcgggatatgcgcactgctcttgttttg aatattgaatctCTCCGGATatatcgcatgcgcactgaggttttaatgaa acaatagagagtttcgaaacgtAGGCCAATCAGCTgtattttaaacattc ttttatttgaaatctctattgataaacatcttttgttaaAGTTTGCTATT ATGTTTAAGCTTATTAATAAGCAAAATCTACTAGTCTAACTAGTGGCCGC caatagcagtgcctatagaccaagagtaaggcctaaaagcctggagctgt ctattgtgtagactaattTTTCTCATACTCTGCAATCTCTCACAATCTTA ACAATTGCATCTCGAGAGTTTACATTTCATTCTAGGTACGCATGCGGGAA AAAGAGGAACGTGAAAGACGGGATAAAGAACGGCGACGGGAACGGGAAGA ACGTGAACGGGAACGCGAACGACGTGATAATAAAGACGGCAATGACAATC GACGTGATGAACGGTTAACACTCatcataaaaattgaattgcACTTTCTC TCGCTTGTATCCATTCTTCTTATCTTACTCTTGTCACTTACTCCTAACCT CTTGTAGTCTCTTCCATTCTTCACTTAATCTCTTGAAGTCTCTAGTAATC AtactttttcatttcatctgctTTTTTTAAGTTTCTGATAATCCTTGAGT ATATACTTGTTGATATAtatcaacaaaatgtttttcGTACACTTTTGAAT TGCATTTTCTTGCTCTTCTTCTCTAAATTTCCTCCAAATTTCCTCAACTT TTTCTATTAGGAGACGAAGTCCGCATCGTGATGATCAAGACAAAGATCGT GATCGTGACCGGAAACGAAGACGCGATGACGATCGTAGTAGAGGTTTGAT TCTTATTTGTCAATGTTGtttgaattgtttttctttgaattttaaatCAA CGCATTTATATGTGTGAAAAACTCTTGTCAGTCTTATATTATCGCAATAT TATTCTGTTCATTAGATTACGGAGGGCGTGCAGCAATCGCACCTCCGCCC TCATTACTAGAAACGACGCCTGTGAATGCGGAAATCATCCAAAAGAAGGA AAACAGTGCCGGAACAGGTGGCTTTTCTACAGGGTATGTATGAACATGAT TGGTTATTATATTTGAATTCCCGAATTCTCCCGTTTACCTGCGGTTTTTA CTTTATAGACAATATGTGTTTCTATCGGAGTCTTAGTTTGTAAGTCTTGT ATTTGTAAGTCTTTTGGCTTGACGCAGATAGACATAAAACTAACTTTGTC GCAACCATGATTAACCCATTCCCAGAGCAACTTGACTACTCTTTATATCA CTGACGGTTCTTCCTGCAACCTTATCTTTACAGAAATCTTATCGCGTCTC AAATCATGGCGAAATACGGTTGGAAAGAAGGTCAAGGTTTAGGTCGTGAA GAACAAGGTCTATCCACCTGTTTACAAGTCGAGAAAACTGGTAAAAGGGC GGGCAAAATCATCAACAAAGACGTTGAAAAGGCCAAAGAGAAAGATTCGT TCCCTCCGCCTTCTTTCCCACCACCCTCCTTTCCTCCACCCATGGGCGGT GCCATGGGTGGTGTACCGAATTCACCTTCACAGCCACAACCACCGGACGT TTCTGGTAATGACTCACAGATGGCGGATCTAATGAAGAACCCATCGAAAG TCGTCCTTTTGAAGGTTAGTCATTGTTTTATCCTACCTATTACACGATAC ATAATAATTAGAACAAATGAGAAAAAGCCCTCTTGATTAAATAAAGCCTG GTGTCAAAGTAAAGAAAACAAGTAATTCGTGttagtttgaaatattttaa aaaagatctaaaactgtttcataaaaaatatttgtcgACAATAATAAatc tttattatttattttaaaagatctaaaactatttcaTAAAAGATATTCGT CCACAATAATAAatcttaagcaaaaaaaatgtatccAAAAGGGATTTATC GTCACTTTTTGTCGACGAATGTTTCACCGATAAGCTAATAAACCATTTCA AACCATTTCAAAATAGGCAAGGTGTCTTGTCTGGTTTACAGGCGaacgcc ggattgaaaataaaaatttataggAATAATGGAAACTTTGTCACGCGAAA GAAATACAGCGCCAGAGTTAGTACACTGTCCCCAATTGCGTTTTCACGTT TTCTTGCTTTGAAAAAGGCTGAAGATTTCTAACTTTAAGCTCGATAACTT tattcactttcgatttcattgCTTTTCCACAGAACATGGTTGGTCCTGGT GAAGTAGATGACGAATTACAGCCGGAGATTGAGGAAGAATGTACCACAAA ATACGGTGATATCATCAAAGTCATCATTTTCGAGGTACTAAAATATCTTT GCCGACCACCGTATTTGATGACGTGattaatttttgagaacaattttaat attttttgaatctgAAGATACCCAAAActtgttaactttttttttctttc ttaaaaaccTGATTTTAACTCAACTTAGCAGTCCCTGATCATTCCTATTA GAAACTGTCCAAGATTTTATTGATTAAATCTTTAAAGCCTAATTTTAACC TTCATTTTTTCACTATGTTCGCCTTTGAGCCAACTCATTCGGTATAAAAA GGCTAAATTTTAGTTATATTTTTGTCTTGAAGATCCCCAATGCACAAGAA GAAGAGGCTGTTCGTATTTTTGTCGAATTCAAAAGAATGGAATCTGCCAT TAAAGGTATTGTTAAAAGATTTAATCTTTTTAATCAATTTAGCCCTAAAA ACATGTTACCCAACGAGTCAGATTTGCCGTCTAAGGAAGTTGGTTCgttg taattaattttttccttgGACGGCCTCTTGCACACACATTTATTCCACAT ACTTTTATTtgctggaagaaaattttagtcCTTTAGGTCAGCCTTGTTTT GTTATGTTTCATCAATTTGCTCCCTTGTTTCAAGTCCCTGTTATTTGTAA TGGGTAATCATGACTGCGCACAAATAAACgcttcttttttatcaatagaT TAGGAATTCTTCATTAGTGTGTGATCAGTCTTATCAGCTCTGCAGAAATG AAAGTCATCCCATCCTTTCAAAGTTCGTCTCAAAATTATGTTGACACTCA ACTTTTTCATGGAAAGATATTTACGAGGAGAATATTCTAAGGGataaaat taagataaaaaaataattttgttttctttgttttctatttcAGCTTTGAT GGATTTGAACAATCGGTTTTTCGGCGGACGATCCGTCTCTGCATCCTTCT ACAATGTCGATAAATTCCGAAGGCTCGATCTAGCAAGTTGAATGAACAAA ATAAGTGTACATCTAGGTATCATTCACAACCAGGAAATACAGACAACGCT CTGAAAAATGGTGAACTGTTGAAGAACGAgtaaaaagtcaaattaaaaTA AGCAACATCAGAAATTATGAACTCGTGATCAACTAACTATCAATATCAAA TTTGGGAGATTTTGACACTTTCTTCTGACGTTACATTAAATCTTTCTATG AAAGCAGAAGTCGGAAATACGCTATGTCGATTATGGATGATGTAGAGTTC ATTGCAAATGCCGTAGATTCATCTAAAATATTACGATACAATGATCGACA ATTATGAACATTAGATTGAGAACTAGAGAAGTTATTGCTCTACCAATGGT ACTGTCGTTTCTGTAAAGATTCTACTTCCAAAGCTAAAATTGCACTGGTT TTTTATGTTTCTAATTATTTTTCCAGGCTTACTGGCTGAAAATAGAAAGG GTTTGCTTCCAGAGCTATGCGAAATAGCATGAGACTGACCAATATTCTGA TCTGAAGCTACTTTTCCCTATCATGCTATTATTAAAGAGTCAAAACAGAT GTGTATCTCCGTTAAGTGTCCCGATCAGTAGAATCTCAGTTCAAGAAGTG AAATCTTAGCCGAAATGGTATGTTCTCAAGAAACCTTGTAAATTTTGTAA TTGATTTTTGCACAATAAAGAAATTGTTATAAATGGACTATGATGATTTG AAGTCTTTGTATCTCATCAACCATCTTTATCAAAGAATACTCTTGCTTTA TTATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037296XLOC_037296Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059220-exon-scaffold_32-1491911889:19616..19758TCONS_00059220-exon-scaffold_32-1491911889:19616..19758Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:19616..19758TCONS_00059220-exon-scaffold_32-1510915933:19616..19758Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:19616..19758TCONS_00059220-exon-scaffold_32-1575043694:19616..19758Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:20349..20422TCONS_00059220-exon-scaffold_32-1491911889:20349..20422Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:20349..20422TCONS_00059220-exon-scaffold_32-1510915933:20349..20422Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:20349..20422TCONS_00059220-exon-scaffold_32-1575043694:20349..20422Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:21109..21156TCONS_00059220-exon-scaffold_32-1491911889:21109..21156Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:21109..21156TCONS_00059220-exon-scaffold_32-1510915933:21109..21156Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:21109..21156TCONS_00059220-exon-scaffold_32-1575043694:21109..21156Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:21689..21775TCONS_00059220-exon-scaffold_32-1491911889:21689..21775Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:21689..21775TCONS_00059220-exon-scaffold_32-1510915933:21689..21775Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:21689..21775TCONS_00059220-exon-scaffold_32-1575043694:21689..21775Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:23601..24108TCONS_00059220-exon-scaffold_32-1491911889:23601..24108Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:23601..24108TCONS_00059220-exon-scaffold_32-1510915933:23601..24108Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:23601..24108TCONS_00059220-exon-scaffold_32-1575043694:23601..24108Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:24231..24348TCONS_00059220-exon-scaffold_32-1491911889:24231..24348Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:24231..24348TCONS_00059220-exon-scaffold_32-1510915933:24231..24348Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:24231..24348TCONS_00059220-exon-scaffold_32-1575043694:24231..24348Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:24599..24929TCONS_00059220-exon-scaffold_32-1491911889:24599..24929Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:24599..24929TCONS_00059220-exon-scaffold_32-1510915933:24599..24929Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:24599..24929TCONS_00059220-exon-scaffold_32-1575043694:24599..24929Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:25498..25599TCONS_00059220-exon-scaffold_32-1491911889:25498..25599Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:25498..25599TCONS_00059220-exon-scaffold_32-1510915933:25498..25599Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:25498..25599TCONS_00059220-exon-scaffold_32-1575043694:25498..25599Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:25898..25970TCONS_00059220-exon-scaffold_32-1491911889:25898..25970Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:25898..25970TCONS_00059220-exon-scaffold_32-1510915933:25898..25970Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:25898..25970TCONS_00059220-exon-scaffold_32-1575043694:25898..25970Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1491911889:26459..27322TCONS_00059220-exon-scaffold_32-1491911889:26459..27322Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1510915933:26459..27322TCONS_00059220-exon-scaffold_32-1510915933:26459..27322Clytia hemisphaericaexon
TCONS_00059220-exon-scaffold_32-1575043694:26459..27322TCONS_00059220-exon-scaffold_32-1575043694:26459..27322Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_32supercontigscaffold_32:19616..27322 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.337505 0.193191 0.479282 0.308821 3.87655 0 1.59994 2.94206 4.21817 6.21933 5.06825 5.45344 2.31129 3.01696 2.66109 1.70232 3.73176 3.1562 6.33017 2.59594 5.28344 6.03002 0 0.375075 2.0305 2.14063 0.348994 0.451413 0.240061 0.202691
Blast
BLAST of TCONS_00059220 vs. Swiss-Prot (Human)
Match: SPF45 (Splicing factor 45 OS=Homo sapiens GN=RBM17 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.108e-43
Identity = 118/264 (44.70%), Postives = 151/264 (57.20%), Query Frame = 2
Query:  869 GRAAIAPPPSLLETT--------------------------PVNAEIIQKKENSAGTGGF--STGNLIASQIMAKYGWKXXXXXXXXXXXXSTCLQVEKTGKRAGKIINKDVEKAKEKDXXXXXXXXXXXXXXXMGGAMGGVPNSPSQPQPPDVSGNDSQMADLMKNPSKVVLLKNMVGPGEVDDELQPEIEEECTTKYGDIIKVIIFEIPNAQEEEAVRIFVEFKRMESAIKALMDLNNRFFGGRSVSASFYNVDKFRRLDLA 1576
            G AAIAPP SL+E                            PV  E  + +  +  +  F  + G  +A +IM KYG++EGQGLG+ EQGLST L VEKT KR GKII  D   A EKD+                        S S P           + +++K P+KVVLL+NMVG GEVD++L+ E +EEC  KYG + K +IFEIP A ++EAVRIF+EF+R+ESAIKA++DLN R+FGGR V A FYN+DKFR LDLA
Sbjct:  171 GGAAIAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGD---ATEKDASK---------------------KSDSNP-----------LTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECE-KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLA 398          
The following BLAST results are available for this feature:
BLAST of TCONS_00059220 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPF451.108e-4344.70Splicing factor 45 OS=Homo sapiens GN=RBM17 PE=1 S... [more]
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