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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059654 ID=TCONS_00059654|Name=TCONS_00059654|organism=Clytia hemisphaerica|type=transcript|length=1320bp
NgccaatttcaaaaaacttttgaaatacaataaaaatctTCCACTTAatg
atatctttccaacgagaaGTTACGTTTTAGTAAAGCATTTTTTTCAAGAG
TAATCATCTTGAAATGCACGAACAActgcttatttttttgaaacagaGTT
TAACTTCTATGGTTTGCTTAGGACGAGGAAGATATTTGATATGCTGAGGG
TCCCAAAGTAAAGAATCCAGCATTTACTAAAAAGAGgcaaaaagagacaa
aaaattcataaagaaCGATAAATTTCACCGTCCACATCTCCGTCCAGGAT
AGAGGGTCCACCTCTACATGTTATTGTGCAGGATTCTTTACAGGAGCACA
CTGGCTTATTTACTTTGTCATCTTTACTTAGTTTAGTGATGCAACTGTAT
TAACCTTATTAGTAGAAACCCTACGGAAATAAGAATAAATGACGTCACAG
GAACTAAAAACACAAAACTATTACCGATGCAATAATATTCATATAACTAT
AAGGAATCTTGACTTAACTGTAACTCCAAacgggtacacgtttttttttt
ttaaaaacttgttttaccaagcagcctcaatgtttcttaagaaatcgacc
ttttgagccttaaatgtttcttacatgtttctaaactttttgacataatc
agctttgtggaaggctggattggaaggttcttaaaagaaaccgagttaaa
aaatgttattttcttattctcagcctcagcatgtttcttagatgtttctt
agtttttaggcattctgagcctcatgtttcttaaaagtgtgtttcttaaa
aaaaaaaaaaaacgtgtatggtaaGATGTTCCcattctctcaaagggtca
tgattttccaaaatttaatgGAAACTAATCAAAATTGACCAACATTTGCT
GGAAATCGCcaaaaattttggcaaaaatctctaaaagggtgccaaaaatg
tcaatttctttttctctgaaagggtccgttttcgaattttggctccgaca
tacccgtcacctcgcaaacttAGTACAGGGCCTTCAAAGCtgtcttttaa
aaaatcacccAACGATGTCTGCTAAAAGGACTACAAATTTAACATAGTAt
tgtaactttttaaaaatactgTTGTCTACAAATGATTGATTTTCTTCCAG
GATTTTTTAGGACTTAAAATCTTTTCAACCTGTAATTTGGATGTACATTT
ATAATCTTATTTAGCGATTCTTTAGCGATATAAAGGTTTCACTTATCAGA
AAGGGCACCCAATAATTCCACTCTGTATAACACTATAATATAGTTTCGca
tacttttttgaagcaaatat Run BLAST on NCBI transcript from alignment at scaffold_329:843933..845252 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059654 ID=TCONS_00059654|Name=TCONS_00059654|organism=Clytia hemisphaerica|type=transcript|length=1320bp|location=Sequence derived from alignment at scaffold_329:843933..845252 (Clytia hemisphaerica)
atatttgcttcaaaaaagtatgCGAAACTATATTATAGTGTTATACAGAG
TGGAATTATTGGGTGCCCTTTCTGATAAGTGAAACCTTTATATCGCTAAA
GAATCGCTAAATAAGATTATAAATGTACATCCAAATTACAGGTTGAAAAG
ATTTTAAGTCCTAAAAAATCCTGGAAGAAAATCAATCATTTGTAGACAAc
agtatttttaaaaagttacaaTACTATGTTAAATTTGTAGTCCTTTTAGC
AGACATCGTTgggtgattttttaaaagacaGCTTTGAAGGCCCTGTACTa
agtttgcgaggtgacgggtatgtcggagccaaaattcgaaaacggaccct
ttcagagaaaaagaaattgacatttttggcacccttttagagatttttgc
caaaatttttgGCGATTTCCAGCAAATGTTGGTCAATTTTGATTAGTTTC
cattaaattttggaaaatcatgaccctttgagagaatgGGAACATCttac
catacacgtttttttttttttttaagaaacacacttttaagaaacatgag
gctcagaatgcctaaaaactaagaaacatctaagaaacatgctgaggctg
agaataagaaaataacattttttaactcggtttcttttaagaaccttcca
atccagccttccacaaagctgattatgtcaaaaagtttagaaacatgtaa
gaaacatttaaggctcaaaaggtcgatttcttaagaaacattgaggctgc
ttggtaaaacaagtttttaaaaaaaaaaaacgtgtacccgtTTGGAGTTA
CAGTTAAGTCAAGATTCCTTATAGTTATATGAATATTATTGCATCGGTAA
TAGTTTTGTGTTTTTAGTTCCTGTGACGTCATTTATTCTTATTTCCGTAG
GGTTTCTACTAATAAGGTTAATACAGTTGCATCACTAAACTAAGTAAAGA
TGACAAAGTAAATAAGCCAGTGTGCTCCTGTAAAGAATCCTGCACAATAA
CATGTAGAGGTGGACCCTCTATCCTGGACGGAGATGTGGACGGTGAAATT
TATCGttctttatgaattttttgtctctttttgcCTCTTTTTAGTAAATG
CTGGATTCTTTACTTTGGGACCCTCAGCATATCAAATATCTTCCTCGTCC
TAAGCAAACCATAGAAGTTAAACtctgtttcaaaaaaataagcagTTGTT
CGTGCATTTCAAGATGATTACTCTTGAAAAAAATGCTTTACTAAAACGTA
ACttctcgttggaaagatatcatTAAGTGGAagatttttattgtatttca
aaagttttttgaaattggcN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059654-exon-scaffold_329-1491911889:843933..845252 | TCONS_00059654-exon-scaffold_329-1491911889:843933..845252 | Clytia hemisphaerica | exon |
| TCONS_00059654-exon-scaffold_329-1510915933:843933..845252 | TCONS_00059654-exon-scaffold_329-1510915933:843933..845252 | Clytia hemisphaerica | exon |
| TCONS_00059654-exon-scaffold_329-1575043694:843933..845252 | TCONS_00059654-exon-scaffold_329-1575043694:843933..845252 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:843933..845252 . |
Blast
The following BLAST results are available for this feature:
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