Blg00617.0 (mRNA) - B. lanceolatum

Overview
NameBlg00617.0
Unique NameBlg00617.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000301:114721..116490+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00617.0 ID=Blg00617.0|Name=Blg00617.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1770bp|location=Sequence derived from alignment at Sc0000301:114721..116490+ (Branchiostoma lanceolatum)
ATGGACAAATACATTGAAGCTGGGGAGAAACTAGGTCTAGCGGGGGAAGA CCTATTGAAATTTGTCCAGCAGCAGCAGGCCGTGGAGAGAGAGGATAGGG CAAAGGAGAGAGAACTTGAGAAGCTGAAGGTAGAGGCTGAAGAGAGGGAG AAGGAACGGCAGAGCGAGGTGGAGAAGCTGAAGTTAGAAGCGGAGGAGAA AGAAAAGGAACGGCAGAGGGAGGTGGAGAAGCGGAAGTTGGAAGCGGAGG AGAAAGAAAAGGAACGGCAGAGGGAGGTGGAGAAGCTGAGGTTTGAAGCA GAGGAGAAGGAAAAGGAGCGGCAGGAGAGAGAGGCAGAGAGGCGACACCA GCGGGAGATGATACAGCTGGGCCTGGTGAGAGAGGACCGGACGGAGACGA AGCATGTCCGGGCGAAGGCGCCGAAGCTACCACCATTCGTCGATGGCAAG GATGAGGTGGACGCATACCTACAGAGGTTAGAGAGATTTGCCACCGCCAA CGCCTGGGAGCCGGATACTTGGGCGTCCAGCCTTTGCGCCCTTTTAACGG GCCGAGCGCTAGAGGTGTTTTCAAGGCTAGACGACACGGAGGCTCAGGAC TACAAATCCGTAAAAGAGGCACTGATGAAGAGATACAACCTTACGGAAGA GGGCTTCCGTGCTAAATTCAGACAGAGCAAGCCAGAGGCGTCGGAAAGTC CGGGGCAGTTTCTGGTAAGGATAAACAGCTACCTGGAGAGGTGGGTGGAG CTGTCCGACGCAACTAAGCACTACGAGGATCTCCGGGACATGTTCGTCCG AGAACAGTTCATGGAAACCTGCTCCCCGGACTTAGCAGTACATCTGAGGG AGAGGGCTCCTAAAGACCTGAAGGAGATGGCCCAGATGGCCGAGAATTTT CTTATGGCCCACAAGCGCGAGCTGTCCGACAGGGGAGAGAGCGCGGTGCG AGAAAATCCGCAATACCTCCCGACGGGGAGGCGGTGTTTCGTGTGCGACA GCCTGGAGCATCTCGTCAAGGATTGCCCGCAAAACAGGTCCGAAGCGAGC ACATCTCCAAAGTCCTTCTACGTCGGCAGGAATACCCCATCATCAGCTTT CGAAGTCAAGGGCCGGGTGGAAGGTCGCCAGGTGCCACTACTACTGGACA CAGGAAGCACGCAGACGTTGATACACGCGGATCTGGTCGATCCGGGAAAG GTCAAGCCGAGTAGACGAGGGAAGATAACGTGCATTCACGGTGACGAGAA GGGCTACCCTGACGCAGAAGTGGAAATCGACATCGGGTCTAAGGTATATC GGGTAATCGCCAAGGTAGCACCGAACCTGCCACGTCCGGCTGTCATCGGC AGGGACATTCCGAACTTGGCAGGAATGATACAGCGGTACGCGTCAGGGAA GATGGAGTCATCTGTAAGGAGGGAAGTAGGAACCGCAGGCAACTCCAACG ATAACGGACCAGAGTTGGGTCGTTATGGTAACAAAGGCAATTATGGGCGC GGTAGACGCGAGAGAAGGGGCCCGGCTGCAGATTTCGCAGAGAGGCCCAA ACTTCGGCTGGCACCCCGTACCAAACCTGTCGTGAGCAATCCTCACCAAG CATCGGCTAACTCCCAGAGAAGTATCTTTGGGGACGCAAAACCCGTAGAC ACAGTGGCGAGGGAGCGCGAAATTGAAGAGAAGCTGTCACGACAGAAGGT CGGGGGGAAAGAGACAGCCTCACCTCGCGAGCGACTAACGCGCCGTGGCA GACGCGCCGTCGTAGGCTAG

Coding sequence (CDS) from alignment at Sc0000301:114721..116490+

>Blg00617.0 ID=Blg00617.0|Name=Blg00617.0|organism=Branchiostoma lanceolatum|type=CDS|length=1770bp|location=Sequence derived from alignment at Sc0000301:114721..116490+ (Branchiostoma lanceolatum)
ATGGACAAATACATTGAAGCTGGGGAGAAACTAGGTCTAGCGGGGGAAGA
CCTATTGAAATTTGTCCAGCAGCAGCAGGCCGTGGAGAGAGAGGATAGGG
CAAAGGAGAGAGAACTTGAGAAGCTGAAGGTAGAGGCTGAAGAGAGGGAG
AAGGAACGGCAGAGCGAGGTGGAGAAGCTGAAGTTAGAAGCGGAGGAGAA
AGAAAAGGAACGGCAGAGGGAGGTGGAGAAGCGGAAGTTGGAAGCGGAGG
AGAAAGAAAAGGAACGGCAGAGGGAGGTGGAGAAGCTGAGGTTTGAAGCA
GAGGAGAAGGAAAAGGAGCGGCAGGAGAGAGAGGCAGAGAGGCGACACCA
GCGGGAGATGATACAGCTGGGCCTGGTGAGAGAGGACCGGACGGAGACGA
AGCATGTCCGGGCGAAGGCGCCGAAGCTACCACCATTCGTCGATGGCAAG
GATGAGGTGGACGCATACCTACAGAGGTTAGAGAGATTTGCCACCGCCAA
CGCCTGGGAGCCGGATACTTGGGCGTCCAGCCTTTGCGCCCTTTTAACGG
GCCGAGCGCTAGAGGTGTTTTCAAGGCTAGACGACACGGAGGCTCAGGAC
TACAAATCCGTAAAAGAGGCACTGATGAAGAGATACAACCTTACGGAAGA
GGGCTTCCGTGCTAAATTCAGACAGAGCAAGCCAGAGGCGTCGGAAAGTC
CGGGGCAGTTTCTGGTAAGGATAAACAGCTACCTGGAGAGGTGGGTGGAG
CTGTCCGACGCAACTAAGCACTACGAGGATCTCCGGGACATGTTCGTCCG
AGAACAGTTCATGGAAACCTGCTCCCCGGACTTAGCAGTACATCTGAGGG
AGAGGGCTCCTAAAGACCTGAAGGAGATGGCCCAGATGGCCGAGAATTTT
CTTATGGCCCACAAGCGCGAGCTGTCCGACAGGGGAGAGAGCGCGGTGCG
AGAAAATCCGCAATACCTCCCGACGGGGAGGCGGTGTTTCGTGTGCGACA
GCCTGGAGCATCTCGTCAAGGATTGCCCGCAAAACAGGTCCGAAGCGAGC
ACATCTCCAAAGTCCTTCTACGTCGGCAGGAATACCCCATCATCAGCTTT
CGAAGTCAAGGGCCGGGTGGAAGGTCGCCAGGTGCCACTACTACTGGACA
CAGGAAGCACGCAGACGTTGATACACGCGGATCTGGTCGATCCGGGAAAG
GTCAAGCCGAGTAGACGAGGGAAGATAACGTGCATTCACGGTGACGAGAA
GGGCTACCCTGACGCAGAAGTGGAAATCGACATCGGGTCTAAGGTATATC
GGGTAATCGCCAAGGTAGCACCGAACCTGCCACGTCCGGCTGTCATCGGC
AGGGACATTCCGAACTTGGCAGGAATGATACAGCGGTACGCGTCAGGGAA
GATGGAGTCATCTGTAAGGAGGGAAGTAGGAACCGCAGGCAACTCCAACG
ATAACGGACCAGAGTTGGGTCGTTATGGTAACAAAGGCAATTATGGGCGC
GGTAGACGCGAGAGAAGGGGCCCGGCTGCAGATTTCGCAGAGAGGCCCAA
ACTTCGGCTGGCACCCCGTACCAAACCTGTCGTGAGCAATCCTCACCAAG
CATCGGCTAACTCCCAGAGAAGTATCTTTGGGGACGCAAAACCCGTAGAC
ACAGTGGCGAGGGAGCGCGAAATTGAAGAGAAGCTGTCACGACAGAAGGT
CGGGGGGAAAGAGACAGCCTCACCTCGCGAGCGACTAACGCGCCGTGGCA
GACGCGCCGTCGTAGGCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00617.0-exon-Sc0000301-1570713199:114721..116490Blg00617.0-exon-Sc0000301-1570713199:114721..116490Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00617.0Blg00617.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000301genomeSc0000301:114721..116490 +
Properties
Property NameValue
GeneIDBlg00617