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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058471 ID=TCONS_00058471|Name=TCONS_00058471|organism=Clytia hemisphaerica|type=transcript|length=988bp
TTGTGTAATGttttggcttcaaattatttgtAAAGAGTAACTCATTCTAT
CACACAATATCCATGGGGGTTGAATTGGTATACGTCAGACGTCGCCCACA
TTTTTgacgaccctgccggtgcacccgacagtcgggtgctgttgtcgggt
gttcgaagttagaaattttaacacccgacagtcgggtgcactTTGTCGGG
TGCTACATCTTGGGCGCTCTTAACAACACCCGACATGTAACGGGCGGGTG
GCGATTTCCCGAGGGCGGAAAAACGGGTTCTTTTTGCTACCGCCCGACGC
CCCGCCTGTAGTTGGGTGCGCGGCATTTTTGACGAAATACTCTAATTACT
CTCTCAAGGCCAGTCTCCACTTCtccgcgcgctgcgatcgcatatttttt
ggcttcaatccttttggcttggaaaaaagattacgtcataaaaatgtaac
gcgcactcgaaaaagtgcgatcgagaAACGCAtgcaagtggagaccgacc
tTTCTCGTCAAACCAATTCTTTGGTGGGTCAAACAATGTGAGTTCCGGTT
CTCGGGCTTTGATGTTCCTGGGAGAAGTTAACGGATTAAcgcttttcttt
tctttttatttatggGTGATAAACGACGGTAAAACGACGAAACGATCAAG
ACAAATAGAGATGTTTCATCAATGATTCATTATCAACGCAAACTTCACTA
AGTGTACCACCACCATTCTTGTACAAGTAACCATTGCGTACATACAAAAT
GTTTGGATGGCTGGGGACAACGTGCGTGTTGCTCAAAAGAAGAAACTGGA
ACAACCTCTTTTTATTGATTAACAAtaatttagaccatgttcaaaCCAGT
TCAGACGTTACAGTTTCATGTCATATCGTTCCGGTATAGTTtccgttacg
gatcgagagtgttcatattggtttcgaaacgtttcggagcaagaaaacgg
agcagttccgttccgatgaaaatagtggaacAAAACCG Run BLAST on NCBI transcript from alignment at scaffold_311:943869..945093+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058471 ID=TCONS_00058471|Name=TCONS_00058471|organism=Clytia hemisphaerica|type=transcript|length=1225bp|location=Sequence derived from alignment at scaffold_311:943869..945093+ (Clytia hemisphaerica)
TTGTGTAATGttttggcttcaaattatttgtAAAGAGTAACTCATTCTAT
CACACAATATCCATGGGGGTTGAATTGGTATACGTCAGACGTCGCCCACA
TTTTTgacgaccctgccggtgcacccgacagtcgggtgctgttgtcgggt
gttcgaagttagaaattttaacacccgacagtcgggtgcactTTGTCGGG
TGCTACATCTTGGGCGCTCTTAACAACACCCGACATGTAACGGGCGGGTG
GCGATTTCCCGAGGGCGGAAAAACGGGTTCTTTTTGCTACCGCCCGACGC
CCCGCCTGTAGTTGGGTGCGCGGCATTTTTGACGAAATACTCTAATTACT
CTCTCAAGGCCAGTCTCCACTTCtccgcgcgctgcgatcgcatatttttt
ggcttcaatccttttggcttggaaaaaagattacgtcataaaaatgtaac
gcgcactcgaaaaagtgcgatcgagaAACGCAtgcaagtggagaccgacc
tTTCTCGTCAAACCAATTCTTTGGTGGGTCAAACAATGTGAGTTCCGGTT
CTCGGGCTTTGATGTTCCTGGGAGAAGTTAACGGATTAAcgcttttcttt
tctttttatttatggGTGATAAACGACGGTAAAACGACGAAACGATCAAG
ACAAATAGAGATGTTTCATCAATGATTCATTATCAACGCAAACTTCACTA
AGGTAGGCTTTCAAAGTGCCCAGTAGAAAACTATTCTCCTCTGGGGTATT
AAAGTTATCTAGGTAGGTTTTCCCACCTTTACCTACCTGAAAATCGtgtt
tctttaaatttttgagtaaCGTTCAATTTGTCTGAGCTGAGTGAGTAACT
TTGTCAACTGGACGCTATATATTACCTGGGTTTTCGTTTTGTAACGACAC
ACTATATGCCGAATTTTTTGTTCAATCTAATCTATTTAGTGTACCACCAC
CATTCTTGTACAAGTAACCATTGCGTACATACAAAATGTTTGGATGGCTG
GGGACAACGTGCGTGTTGCTCAAAAGAAGAAACTGGAACAACCTCTTTTT
ATTGATTAACAAtaatttagaccatgttcaaaCCAGTTCAGACGTTACAG
TTTCATGTCATATCGTTCCGGTATAGTTtccgttacggatcgagagtgtt
catattggtttcgaaacgtttcggagcaagaaaacggagcagttccgttc
cgatgaaaatagtggaacAAAACCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058471-exon-scaffold_311-1491911889:943869..944570 | TCONS_00058471-exon-scaffold_311-1491911889:943869..944570 | Clytia hemisphaerica | exon |
| TCONS_00058471-exon-scaffold_311-1510915933:943869..944570 | TCONS_00058471-exon-scaffold_311-1510915933:943869..944570 | Clytia hemisphaerica | exon |
| TCONS_00058471-exon-scaffold_311-1575043694:943869..944570 | TCONS_00058471-exon-scaffold_311-1575043694:943869..944570 | Clytia hemisphaerica | exon |
| TCONS_00058471-exon-scaffold_311-1491911889:944808..945093 | TCONS_00058471-exon-scaffold_311-1491911889:944808..945093 | Clytia hemisphaerica | exon |
| TCONS_00058471-exon-scaffold_311-1510915933:944808..945093 | TCONS_00058471-exon-scaffold_311-1510915933:944808..945093 | Clytia hemisphaerica | exon |
| TCONS_00058471-exon-scaffold_311-1575043694:944808..945093 | TCONS_00058471-exon-scaffold_311-1575043694:944808..945093 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:943869..945093 + |
Blast
The following BLAST results are available for this feature:
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