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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058463 ID=TCONS_00058463|Name=TCONS_00058463|organism=Clytia hemisphaerica|type=transcript|length=1755bp
GGATATTATGTTGATTATTCTGTATTTTTCAgcattatataaaaaataaa
taaaaaacaaaaaaatatggtCAAATACATACTTCATTATTTCCCAGTGG
TTGGACGAGCTGAGCATGCGCGAGTGATGTTCGAATTGGCAGGAGCTGaa
tatgaatacaaaacatATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAA
AAATCATCCCAACCTGTTCCCACTTTCACAAGTTCCAACATTAGAAGTCG
ATGGTCAAGTTATTACACAGTCATATGCCATCAATAGATACTTAGCACAT
GAGTTTGGATTTTATGGTGATTCGAATACTGAGAGAGTGCAAATTGATCA
AGTGGTAGAAACACTTGTTGAAATGTTCGCAGAAATGGCTCAGTTGATTT
ACATGGAACCAGATTTAGAGAAAAAGAAAAGTGCATTGAGTGAATTCgct
gaaaaattccaaaaacatTTGAATTTCATCGAAAGATTTTTGAAGAACAA
TCCATCAGGTTATTTGGTTGGAAATAAGATCACTTTAGCAGATATTTGTC
TATTCGTTTTCGGCGACATTGTCACTTTCCATTATCCAACCTTTTTTGAT
AACCAAccagaaatcaaaaaattcatcAGCCGTTTTCATGAAATTGAACA
AGTCAAAAATTATGTGGAAAAGAAACGAACCCATAAAATGCATGTTTATT
GAGAAAGAAAGTGTCAATCGTAACCATAGAAACGGACTTAACCCAAGAAG
GGATTCTGGGCAATTTAGAGAGAACTCTTATGTTGTTTCTCAAGTGCTGG
TAactagatacatagatacactttttatttaaaatacaTTCACAAAAAGG
CTTACGTACTTTTATTTGCAACatcattttttaacattttgtaatttttt
tggtcaaatATTTCTTATAGGTTTTTATTtagtagaaaaaagaaaataca
ttaattttaaatttttcttatgtGTTCCCATGATGAATATAATTTGGGAC
TGTTGTTGTGTAATTTCCTAAGATTTTGGGTGTTTTAATGTCCATAGACT
AAAAAGTTATAAACTTGTTCtcaaagctttatgttcttataagaaatgtA
TATGCAAGATACCGCAGTCTTTGTGCCTTACAACACTGATAGTAGAACAT
CGAATTAAAAAGTAGGCTACGTCAACCTGATCTTAAAAACTTCGTAGAAC
gttttagaaaattaaaaaagtaaagaatCATTTGATTATGAGAGACCTTA
ATTGAAAACTTACATATCTTTCAAGAATAATAATGAAAACTTATAGATAC
AGTAGTATTAGgcctttttataaattattttgagtgcaacgatagcctcg
ttttgaaaccattaccaagctTATTAAATCCCTTCGTCCCTTGATTCTTC
AAATGTTACTTTTAAAGATAGAGAAAACTTCTTGAGGAACTCAAAATGAA
CCTGGCAATactttgaaaacgaggtaagcgatGAGTCGTCGAGTCGTCGA
TTAACCAATTTTAGCATCACGTCAAATCAAATTGATTTATAAACGCATTA
TACACATAAATACCCAGCTGTTACTGTTTCAATATGAACCTTCATGATGT
ATGGACATTGGTGAAAGTTAGATGGACATTAACCCTATtcgaactagggg
gggggggggctctttctgttcggaggtcaaactattggtaatagctcctg
aaataatagagcttttgccttgaaattttctgtaaattcctaacttttat
tttgc Run BLAST on NCBI transcript from alignment at scaffold_311:705531..711491+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058463 ID=TCONS_00058463|Name=TCONS_00058463|organism=Clytia hemisphaerica|type=transcript|length=5961bp|location=Sequence derived from alignment at scaffold_311:705531..711491+ (Clytia hemisphaerica)
GGATATTATGTTGATTATTCTGTATTTTTCAgcattatataaaaaataaa
taaaaaacaaaaaaatatggtCAAATACATACTTCATTATTTCCCAGTGG
TTGGACGAGCTGAGCATGCGCGAGTGATGTTCGAATTGGCAGGAGCTGaa
tatgaatacaaaacatATGTGTTCGGTGGTGAATGGAATGAAGCCAAGAA
AAATCATCGTTAGTGATTTCATCTTTTTGCCTCACAAGATTTTTCATGAG
AATGATGTTTGTTcgtttcatcatgaatattctgaACTTTTTGAGTAGAA
TCATCCTAAATTacacattttattttataagaacatccaaaatttttgaa
gcctttttaACTTTAAGTTCTTAAATGAGTTTTAAGACTAAAAATGTATT
ATTTCCACAATTTTTCGAGTATTTTCGTCCATTTTGctaagaaattgagt
gttttagggtctacaaagccttaaaatgttcttaacttgttctttagcaa
tatgttcttatatagtttgttcttataaaaaacggtGTATTCTAATGATA
TTCTTAGTTAGGATCCAAACTCAACCAATAAAAACATGTAATACGCATct
gaagcataaaatggcatttttgtgaatgTATTGCGAGTCCTACTGTGAAT
TCGATTTGGAAGCATTgcagattttgaaagttttgcagaaattttcgcga
gcataaactttcgcaaatcgCCTCTTTAAATATATTcgaagacatttact
ttcgcgcaaaaggccaaaattcgtgGAAATCgagaaagtttctgctcgcg
aaagtttgtactgAAGTACAGGcgaaataataatgataatgtCAATCAGG
CCCTTCAAAATAAACCAATTATTATTCCGTAGGCGACAGCAAAAATCACT
TGATATTTCTTTTAAACTTACAGCCAACCTGTTCCCACTTTCACAAGTTC
CAACATTAGAAGTCGATGGTCAAGTTATTACACAGTCATATGCCATCAAT
AGATACTTAGCACATGAGTTTGGATTTTATGGTGATTCGAATACTGAGAG
AGTGCAAATTGATCAAGTGGTAGAAACACTTGTTGAAATGTTCGCAGAAA
TGGCTCAGTTGATTTACATGGAACCAGATTTAGAGAAAAAGGTGTGAATG
TTACTTTATTCTGACCCGTTCAGttgcaatgggcttttccagaaataaat
tttacccccactgtcgaggatattaatttttcgaagtattgaaccccctg
gatatcctactttattagtaaagacatCCACTCTtgaaaatatgctcaac
cccctggatatcctctcttataaggATGCTTACCCCTTGATATCGtcttt
tttacttgaaaagaaaCTCTACCTCacggatatccgctcccttgtagata
tttaaccccctgaatatccgatatcctcaacggGGGCacggatttttttc
tggataaGTCCAATCTTGGCACGAGCACTTTCAAATTCCTTGTCGGGTTT
ATAATATTAAAGCTTGGAGAGGGGGGTTGGTACTTCGACAAAACAGGTGA
TGGGTATGTACGATTAAGGTAACCTTTTTCATATCTCcaaaagtccctca
aagggatAAAAATTAATAGGTTATCgttttacttcgaataaacgcccctc
caaATAAACCCCttggaggggcgtttatttgatcCAGGTAGCAGTGAGGA
AGtataatatgaaaaaaatctaattttcgcATATTTACGCATATTATTCT
CttcctttccaaaaaaaagcaAGCTTGAGTCATAATTTACACTTCTAAAA
TGGATAATGCATTTAAGAGAGGGACCTGCCTACGAGAGAGTTGCagaaca
ttttattttatttattttataaaacattacctgtttctattgaaaaatgA
TGGTTCTTCTAATTGGTAGTAAgtggaaaaaagcaaaaatcagaggataa
aatttgatgaaagatAACGAAAGACTTGTTAACAAATAcccaaaacatat
ttttatctGAAATTTATCATGTTAACAGTTTGATTGAAAAACGACAAATG
AAGTGCTTCATGTTGAGGCGacgattttctgaattttagaaGGATTTTCT
TGTGAATTGGGAAGTCTgtttctttgtttacatttttctatcTTCCTGTT
TCTGTTTTGAAGAAATCAAACCTTCCTAAAACAGCAGATCTTCCGAATGA
GGAAGAATTCTCTATCTTCCCGTTTGAGTGCCGAAATATTTTCGAAACCT
AATCGGGAAAATCTTCCCGTTCGCTATCCTGAATAAATTACTCTTAACAG
ATAGTTACATACCATCGTGCAAAGTAAACACGAgtgttggattttttttt
ctcattgatCCAACcttacgagaaaaaaaatctacagAAACTTGGTAAAT
GAGTCCCTGACTCGAGTCGCATCCATGAAAATCTTATTGAATTTGTATAT
GGATTGCATTTCTTGAAAGTGAGATAAAGTAAATATCTATTGGCTGTGTC
AACCAATATATCCCGTACTTAATTTATGACCAAAAACTGTCAATCTTTTC
TTTGTAGTAGTATATTTTGAATTAGCTTCCATCTCAACTACTTGTTTTTC
CCCATGCAGTTTAAAtattaggcgaaattttcgacttaaaAGTATCGTCT
TGTTTACTTTTAGAAAAGTGCATTGAGTGAATTCgctgaaaaattccaaa
aacatTTGAATTTCATCGAAAGATTTTTGAAGAACAATCCATCAGGTTAT
TTGGTTGGAAATAAGGTATGtcttacattttttgaaaataaaagaatttt
tgtATTTCTTGGCTTACATGATTTTAATCGATCGGTCAGTTGGTTAGACG
GGGCTAAACGATTCGTCTTTAAAGAAACCCCTTTCTCACATCCCCGAAAG
AACTTTTTCCcaaagtggggataaaaatatctaGCGAAATCACAATGGGT
AtatcattctatctttctaAGCTAAAAAATCCTTGTCCCACAGGAAATTT
TGACCTAATTTTCCAGTCGGACGGGGGTCCCACCGGTtctgtgacacaag
ggtgtTTCACCCAAGAGAGAAAATTGAGGACGTTCATCTAACGGTATTAT
TGAAGCGTTTGATGAACATTATTCTAGCTTTGTAGTAAAGTACTTATACC
ACTCTTCCTCTATGGATTTCCCCACTTACGTTTGATCCCTCTCTTAAACC
CTATTAACCCcaaccttttttatttttgtagccccagggggggtagaatc
tacctcgattatttttgatctaatAGAGCTATGACCATGAAAATTGGTAC
AGATATTCTCCATCATGACACAAActttcagaaagaaaaaaaatttgact
tccacctgtcggaaaaaagcaaaactatatggtttacaaaaatgtctctC
ACAGTCGAAGCAATAAAGATATtgagattctgtttgaagattctgaaaga
taaaaggttcttctttaacataattgccggttttgtaTTTCCCATTAAAA
CTTTATGCTGAAAATCTATGCTGAgaatgagtaaaattttcaaaatttga
tgacgtcataaataatgacgtcatcattttcatgATGTCATAAATGTCaa
agattttttaagttttttgaaatcaaattgttaatacctatcacgtgtca
aaatttgaatatgattggATCAATACTTCAGAAATTAtcgcaattttaaa
attttgagttttaagcgattttagcttggtttcacaataaagtcatgaGA
GCTGACCTAGAAGACATATGACCCTAAAAATTTACACAattactcttaat
aagattttattaaaagtcaaaaagtttcaagtcgtttcaaaatttttact
ccgaaatatacacaaaagaacacaagtgtggtagattctacccccctggg
gctaatagggttaatagaccttttcataaattacgtcactgacatcactt
gcctcgttttaaaattatttgcaTGGTGATTTACTCTAAGCGGATTTTAT
TGAATTAAACTACtatctattcataaaaaaattatttaatgtctcaaggt
aTATATgtccgtgacgtaatttatgaaaaggtcagAGAAGtaccaagtac
cattttgaacGGGTTTTGCATTAAGTACAGAGTCTTTGGTATAAGCCGAC
CGGGGAGTgcatagtttctaccccctaTATTTAggggggtcttgggtttt
gacgaaccaaaagcaagggggaTGTTAAAAGTTGGACTTTCCTAATGAGG
GGTTGCCAGTTAAGTAGGGgtcttcttacctaagggggagggggtcttct
tagataaggggaaattttctttgaattatgactcttgtacaatcgtttca
tttaaactgattttctaagggaagtgtcaaattttaaatgaatttcctaa
ggggggttagcacttaagggggggggggtcctcttacctaagggggaggg
ggtcttcttagataaggggaaattttctttgaattatgactcttgtacaa
tcgtttcatttaaactgattttctaagggaagtgtcaaattttaaatgaa
tttcctaaggggggttagcacttaagggggggggggtcctcttacctaag
gggggatcttgacccctctagaaactatgtcggagtgaacccatgaccct
gtaCACCTTAACTGAATGCTCAACCTTTACACTACTGGTCGTTGACGTGG
TACTACATACCTACTTTTACTTTTATTCATTTAGATCACTTTAGCAGATA
TTTGTCTATTCGTTTTCGGCGACATTGTCACTTTCCATTATCCAACCTTT
TTTGATAACCAAccagaaatcaaaaaattcatcAGCCGTTTTCATGAAAT
TGAACAAGTCAAAAATTATGTGGAAAAGAAACGAACCCATAAAATGCATG
TTTATTGAGAAAGAAAGTGTCAATCGTAACCATAGAAACGGACTTAACCC
AAGAAGGGATTCTGGGCAATTTAGAGAGAACTCTTATGTTGTTTCTCAAG
TGCTGGTAactagatacatagatacactttttatttaaaatacaTTCACA
AAAAGGCTTACGTACTTTTATTTGCAACatcattttttaacattttgtaa
tttttttggtcaaatATTTCTTATAGGTTTTTATTtagtagaaaaaagaa
aatacattaattttaaatttttcttatgtGTTCCCATGATGAATATAATT
TGGGACTGTTGTTGTGTAATTTCCTAAGATTTTGGGTGTTTTAATGTCCA
TAGACTAAAAAGTTATAAACTTGTTCtcaaagctttatgttcttataaga
aatgtATATGCAAGATACCGCAGTCTTTGTGCCTTACAACACTGATAGTA
GAACATCGAATTAAAAAGTAGGCTACGTCAACCTGATCTTAAAAACTTCG
TAGAACgttttagaaaattaaaaaagtaaagaatCATTTGATTATGAGAG
ACCTTAATTGAAAACTTACATATCTTTCAAGAATAATAATGAAAACTTAT
AGATACAGTAGTATTAGgcctttttataaattattttgagtgcaacgata
gcctcgttttgaaaccattaccaagctTATTAAATCCCTTCGTCCCTTGA
TTCTTCAAATGTTACTTTTAAAGATAGAGAAAACTTCTTGAGGAACTCAA
AATGAACCTGGCAATactttgaaaacgaggtaagcgatGAGTCGTCGAGT
CGTCGATTAACCAATTTTAGCATCACGTCAAATCAAATTGATTTATAAAC
GCATTATACACATAAATACCCAGCTGTTACTGTTTCAATATGAACCTTCA
TGATGTATGGACATTGGTGAAAGTTAGATGGACATTAACCCTATtcgaac
tagggggggggggggctctttctgttcggaggtcaaactattggtaatag
ctcctgaaataatagagcttttgccttgaaattttctgtaaattcctaac
ttttattttgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058463-exon-scaffold_311-1491911889:705531..705738 | TCONS_00058463-exon-scaffold_311-1491911889:705531..705738 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1510915933:705531..705738 | TCONS_00058463-exon-scaffold_311-1510915933:705531..705738 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1575043694:705531..705738 | TCONS_00058463-exon-scaffold_311-1575043694:705531..705738 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1491911889:706454..706671 | TCONS_00058463-exon-scaffold_311-1491911889:706454..706671 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1510915933:706454..706671 | TCONS_00058463-exon-scaffold_311-1510915933:706454..706671 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1575043694:706454..706671 | TCONS_00058463-exon-scaffold_311-1575043694:706454..706671 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1491911889:708194..708295 | TCONS_00058463-exon-scaffold_311-1491911889:708194..708295 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1510915933:708194..708295 | TCONS_00058463-exon-scaffold_311-1510915933:708194..708295 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1575043694:708194..708295 | TCONS_00058463-exon-scaffold_311-1575043694:708194..708295 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1491911889:710265..711491 | TCONS_00058463-exon-scaffold_311-1491911889:710265..711491 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1510915933:710265..711491 | TCONS_00058463-exon-scaffold_311-1510915933:710265..711491 | Clytia hemisphaerica | exon |
| TCONS_00058463-exon-scaffold_311-1575043694:710265..711491 | TCONS_00058463-exon-scaffold_311-1575043694:710265..711491 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:705531..711491 + |
Blast
BLAST of TCONS_00058463 vs. Swiss-Prot (Human)
Match: GSTA1 (Glutathione S-transferase A1 OS=Homo sapiens GN=GSTA1 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 7.706e-19 Identity = 63/203 (31.03%), Postives = 101/203 (49.75%), Query Frame = 1
Query: 82 LHYFPVVGRAEHARVMFELAGAEYEYKTYVFGGEWNEAKKNHPNLFPLSQVPTLEVDGQVITQSYAINRYLAHEFGFYGDSNTERVQIDQVVETLVEMFAEMAQLIYMEPDLEKKKSALSEFAEKFQ-KHLNFIERFLKNNPSGYLVGNKITLADICLFVFGDIVTFHYPTFFDNQPEIKKFISRFHEIEQVKNYVEKKRTHK 687
LHYF GR E R + AG E+E K ++ E + +N L QVP +E+DG + Q+ AI Y+A ++ YG ER ID +E + ++ EM L+ + P E+K + L+ EK + ++ E+ LK++ YLVGNK++ ADI L V + + P +K +R + VK +++ K
Sbjct: 7 LHYFNARGRMESTRWLLAAAGVEFEEK-FIKSAEDLDKLRNDGYLM-FQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADL-GEMILLLPVCPP-EEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQPGSPRK 205
The following BLAST results are available for this feature:
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