TCONS_00058525 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058525
Unique NameTCONS_00058525
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2679

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058525 ID=TCONS_00058525|Name=TCONS_00058525|organism=Clytia hemisphaerica|type=transcript|length=2679bp
CAGCAAtaaaagtctttgaaaaaaCATTCCGCAGTTTTGGCTGGCTAGAC
ATTTTCTACCGTTTTACACGCTTTCATGATGGTAGTTGTTACCAGATCTA
ACGGGCTTTACCAAGAGGAAATTCAAATCGGAGACAACTATCAAGCTGAA
GTAGATGAAGGGCTCACTGTATATTCCAAAGGCGAGAAAACTTTAGATGC
TGGCGATAAACTTTTGTGGACGCCATCCGTTATTTCAGCGGAGAAATTGA
CTTCATATTTGGACTTGGTTTATAAATTATCAGAATTTGGATCACAGCGC
TCAGACCGGGACGACGAACAGgcaTTGTTTACTCTCTTGCAAACTCGCGA
TGTAAGTGCAGCCTTAAAGAAACGACAAGAACAGGATAGGCAACCACCTG
ATGTCAGCCTGTGGTCGGAAGAAGAATGCCAGAATTTCGAACAAGGACTT
CGTGTATTCGGTAAAGATTTTCGACTGATACAAAAGAATAAAGTACAGAC
CAGAACGGTCGGTGAAATAGTTCAATTTTATTATCTTTGGAAGAAGACAG
AACGACATGATGCTTTTGTCACGCAAACAAAACTTGGACGGAGGAAATAC
ACTTTACCAGGAATAGCGGATATGATGGGTCGTTTCATGGAAGAGAGTGA
TCCTTTATTTACCAACCAACCGATCAGTCCGACCGGCGACGAAAATCACT
CAACAACGCATTCAAATCACTATAGTAACCACACAACAATACAAGATGGT
GCACAGTCATACAATAATACAAACAATTTAAATAACGTACAAATTAAAAC
AGAACAGCATTTAACGGACTATCAACATCAAAAAGAGAATCAGTACGGTC
GATCGAGCTACACACCTAATTATGCACAGTCCGTACCACAATCAAGAGCG
GCTGACGAATCTTGGCGGACCACGCAGTCTCCAATTTCGATGACCAATTG
ATGGGTGAACGTTGTAAAGTTTTGTACGTATGTATGTGTGTATCTGTTGT
GTATATAATGAAATCAAGGGTTGAATCTCATAATGCGCTGAAACAAAGAT
TAATTGTGCTGATATGAAATGCTTACGTTAACCCTCTCTACGATTCGTTA
TATACACGCATGCACATCAATCAAGTGATGGGAAAGTGACGATTTACATC
AATGGGGAGACGAGTAAGATCTTTTGCGAATACCGTTAAACAGTATGTCA
AACAGCTGGCGTTTCTTGTTTAGAGCTATGATGATAGAGTGGCTGCACAT
AGAGTGAAGTGCTTGTCGTTAGATGGATCACAGATGGTTTGATGGTGGCA
TTGGATGTTTTGCAGTCCTAATGCATTGAGCTCTTGTAGAAATGACCATT
TTGTCAAATGATAGATTTGCGCATTATTATGATAGGAGAAGCTGCTTTTT
CTACGGTCAAGgtctatttttctcaaaattattCATTTTCCTTATACCTT
AATTCACTTGGTCAGGTTTAGGAAACCAAGAAGCCTTTCGACATTTGAAC
TTTAAACTTTTTCAACGATTGCCGTTACAGTGGTATCCCAGACAAGATGA
ATCtctcaaaaagaaatattacttTTGAAGTTTTCATTCAGAACAAAGTT
CTTCTGTGTCTCAGCGAGGTACAAATAGAGGCTTTTCTTTGtctaaaatt
caacaaaatatgAAGAATCCCTGCCTGGTTGTTTAAAGTCCGTTTCATTC
TGagacaaaaatatgttcagttACCGTTTTTCTATAGAGTATTATTTTTA
TGTAATTCAAATGTTGTGGTGATATCAATACCAGGAGTTATGTACTGTAT
GGATATCAGTAAAGGCCGGTCTTCACTTGCGCGCGtctcgatcgcacttt
ttcgagcaaagcttccacgctattgctcaaaagaaaaatgaagcaactcc
attggcgcgatctgacgtaacggttgaaaaaagttgaaatgtgtgaTCAT
CTTTTTTTTCGAgagcgcgctacatttttatgacgtaatcttttttccaa
gcagcGCGCGCAAGTAGACACCGGCCTTAACTGTGTGTGGCATGCATTCA
TGGCATaaaaaaaaacgcgaaaaaaaattgtgaCTGCCTGTCACtcaatc
aaattcaattttcagctcattataaaaagtgtttttgatatgcgtaagtc
aagaacTACGTTTTGTGACGATGGCActcaaaaaatctaaatatttttgc
tttcgaAAAAGAGGACAAATTCTGGACTCATTGAGTATTTCCGATTTATC
GTTAAAATAACCTTCTTTCCCAGCTTTATCGTTGCCAGTTTTCTGTTACT
TACTGGTGACGTCAGATGATGTGTCTGTATCAGTAATACACGGAGCGAGG
ATGCTGATAAAAAGAACGGAAACGTAATCTTGACTTTATGGATATCATGA
ATTTCAGATttgttgtttatattttttgttgttaTGTGATGCGACTCGTT
ACAACAGCAATCATatgaaatttgatgttttattttaaaagaaagatttt
attacTTGTCAACTATTATTAATATCTACTACCTATACCCAtttaattta
tggaaaaaagaagcatttttttatatacattcACATGTTTCatttcgtca
attttaatttaaccCTTTGACTTTCCAGGGGAAACTTAGTTCGTTCACGA
ATTGTCAAGAGAGTAAACGGAAACCCACC
Run BLAST on NCBI

transcript from alignment at scaffold_311:368060..375239-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058525 ID=TCONS_00058525|Name=TCONS_00058525|organism=Clytia hemisphaerica|type=transcript|length=7180bp|location=Sequence derived from alignment at scaffold_311:368060..375239- (Clytia hemisphaerica)
CAGCAATAAAAGTCTTTGAAAAAACATTCCGCAGTTTTGGCTGGCTAGAC
ATTTTCTACCGTTTTACACGCTTTCATGATGGTAGTTGTTACCAGATCTA
ACGGGCTTTACCAAGAGGTGTGTTGGCTTAAACATTACTTTTGCTTAACC
ATACCATCTTTTGAAATTTCTGTTTGCTATACAAGAACAGTTTTAGGAAT
ACCATTTCTTATTACTTTTTTTTACAGGAAATTCAAATCGGAGACAACTA
TCAAGCTGAAGTAGATGAAGGGCTCACTGTATATTCCAAAGGCGAGAAAA
GTAAGCCCCGTCACCATTTTTTTTTTACTCGACATGACCCTACATTATTC
ATAATACTAACTTGAGAAAGATCCTTAATCCGCCTTGATTCGCAATATTT
TTAATATGATTTTCGTGGCCCAGAACCGCTACACCAAAAGAAATTTGGCC
CTTAAAAATAAATTGTGGAGTTTGGCGGAAGCAAGGCAAACAATTTAGCG
TCTGAACTGGGGTGAGGGCTTTCAAGGGGCCGGTATTGACCGATATTCCG
GTTTTTTCATTCTTGGGTACCCCGCACTGACTGAAACCAGTGAATATTAC
CAAGCATTCAAAACTATCCAATAATATCAAGAGTAATATCATAAATCTTT
TTTACTTTCTTGACATAGCTTTAGATGCTGGCGATAAACTTTTGTGGACG
CCATCCGTTATTTCAGCGGAGAAATGTAAGTGGTTTTCTCTTGGTTTGAA
AAAAGAACAACTGTGCGCTTAATTTTCAAATCTAAATTTCGGTCTTATAA
TACCTATGTTGTTATAATTGTTTGACCGAAATATAGATGACCAAATAAAG
GGATTTTTCATATTTTTGTTGGACAATTTGTACTGGTTTAATTCTTTGAA
AAATATCAAAACCCACTAATCAAATTCTCTGTTTATAGTGACTTCATATT
TGGACTTGGTTTATAAATTATCAGAATTTGGATCACAGCGCTCAGACCGG
GACGACGAACAGGTTAGCTTTGATCGTTTTACATTCCATTATTGTAATAT
GCTCTCCCCCTCCGTTCAAAGCAAGTGAGATTTTTTATACTTTTACAGTT
TTCGTTTCGTCCGCACTGCTTAAACTTCGCGTTGGTAATAATATGTTATT
GTTTCTCGTCTAATCGTGTAAAAAAGATATTTTCATCACAAGGGCTTTTA
TTGCTTCGCTTAGTGGATCTGCTCGCTAGAATAATTTTCACGTCTCCCAA
ACACTCCCAGCGGCAGAGTGGTTGGGAAGCATTGAGATGGACTCTCATAA
ACTTCGCTATTATACACGGGGACTTCCCTGACGATACAAACTTCAAATTT
TAAGTGAAGTTGCTAGTACGCTGTTCATGTTATAGATAATTTTTTTCTTC
AGGCATTGTTTACTCTCTTGCAAACTCGCGATGTAAGTGCAGCCTTAAAG
AAACGACAAGAACAGGATAGGCAACCACCTGATGTCAGCCTGTGGTCGGA
AGAAGAATGCCAGAATTTCGAACAAGGTAATGTACTGCTGATTGTTGCGA
ACTCAACAAAATCAGTTGAGAAGGAAATAGATAAACTGTTAAATTGATTG
ATCCTCCTGAATATTTTCAATGTAAAGTTCAAACACAAGCGTTTTCATTT
TATTTGAATAAAATTTAAAACATATATTATTGCCGCCCGTAGCGAGCTTG
TGAAGCGTAGGGTGGCCTACATAGCTTCACGCAAGGATATGGGACAGGAA
TCTCGATTTTTGTTTGTTTTGTAATCGGTCTTCCGGTTAATTAGTGTTCC
GTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATGGTACTTCGACAGTAAGTACAAATATTTTTTTCTTTGTGTA
CTTTTATAAGACTTGGTTTTATTAATCTTTTATGTTTAACCTGTGTTCTT
GTTGATACTTAGGCAGTCATCGAAAAAATGCTCTTTTCGCGTGGCAACTG
GTGTTAAAAATGCATGCGGGCGGACGCGCGGTCAAAAAAATTCTCAGGTT
TTTTTACGTCAGTAATTCAGGCCTCAAGGGCGGGTGGTGTGTCGCGAGCA
AAACAATTTTTCGATGGCCGTCGGAGAAATTGAGAAAAAAGCTATACTTT
GAAAGAACAAATTGGTTTTCCCGGAGTTTTTTCCGCATCTCCGCACCGGA
AAATAAGCAGAAAATATGATGCAGGCGGGTGATGCGAATAGAACAATTTT
TCGACGACCGCTACCAGGCACTATTTGGGAAATTATTATCAAAGATTGAA
AGAAACTTTTGTGAACTAGTTTTGAGGAAATTTCAGTACACTCACCATAT
ATCATCTAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAGATTCGTATTTTATTCTTTGTAAAAAGTAA
TTCACATTTTTAGAAAAAAAGTATGTTTCATTTATGTTAGCTTATTCATT
GATATCTGAAAGAAAATGCTGCTAAGAAGAATCATTCTAACTATTCCAAA
TCATTTCCAAACTTTTGTTATAATTATAAAACATTAAAAAGCCTTAATTA
GCATTAATTAGTTTTTACATGCATTTGTTGTACTAGCGGGTGGCAGTTAG
TGAAAGCTATGGCTAGTATAATATACATAGATAAACTTATTGATGAACTA
TATTCCAACCATAAATTTCTGTGACGCTCTACATTACATAAAAATAAAAG
TTGATCAACTTAAGAGCCAATTACCGCTGCGCCTAAATTTTGGGTTTAGA
AATAAGCACCGCTCGTTAAAAAGCACCGAACTTTCAAATGGTATGTATTT
GACTCAATGAAGTTTCGGACAGTTTTTAATTGGGCTATTATTCGGACACA
TTTTCATTTAAAACTTCCCCTTTTCTTTATTTATAGGACTTCGTGTATTC
GGTAAAGATTTTCGACTGATACAAAAGAATAAAGTACAGACCAGAACGGT
CGGTGAAATAGTTCAATTTTATTATCTTTGGAAGAAGACAGAACGACATG
ATGCTTTTGTCACGCAAACAAAACTTGGACGGAGGAAATACACTTTACCA
GGAATAGCGTAAGTGATCTATTACAGTAGACTTTCTGATTTGTTCATCAA
GGGAGCAAGAATTTTAGTAAATCGACAAGAAAAACATTTTTGCCTCATTT
TTAAATTACTCATCCTAGAAGATAATTTCTAATTCTATTTGGTTGAGCTG
CAGTAGACCATTTTTGCGACTATCGGCGCTTCCAATGAGGCACCGTCAGC
ACATTTAGCTGACTACCCAATTCCCCTCACATGACATGGGTTGACCCGGG
CCAAGGTTCGTTTACTTGCCGATTGAACTGCTGCAAGTGGGAATCGAACC
ATAGCCGCCTGTACAGCTTCTAAGGTTAATGACCAGCGCACGCCACAGTA
ACTGATCACTCTAAATTGAAGTTTAAAATTATTCATACAAACATCTTCAA
AGAGCTTTTAAAATAGCTTAAATATACTCTTCTGAAACCACAATTGAAAT
TTCTCTCGTACGTTTTAGGGATATGATGGGTCGTTTCATGGAAGAGAGTG
ATCCTTTATTTACCAACCAACCGATCAGTCCGACCGGCGACGAAAATCAC
TCAACAACGCATTCAAATCACTATAGTAACCACACAACAATACAAGATGG
TGCACAGTCATACAATAATACAAACAATTTAAATAACGTACAAATTAAAA
CAGAACAGCATTTAACGGACTATCAACATCAAAAAGAGAATCAGTACGGT
CGATCGAGCTACACACCTAATTATGCACAGTCCGTACCACAATCAAGAGC
GGCTGACGAATCTTGGCGGACCACGCAGTCTCCAATTTCGATGACCAATT
GATGGGTGAACGTTGTAAAGTTTTGTACGTATGTATGTGTGTATCTGTTG
TGTATATAATGAAATCAAGGGTTGAATCTCATAATGCGCTGAAACAAAGA
TTAATTGTGCTGATATGAAATGCTTACGTTAACCCTCTCTACGATTCGTT
ATATACACGCATGCACATCAATCAAGTGATGGGAAAGTGACGATTTACAT
CAATGGGGAGACGAGTAAGATCTTTTGCGAATACCGTTAAACAGTATGTC
AAACAGCTGGCGTTTCTTGTTTAGAGCTATGATGATAGAGTGGCTGCACA
TAGAGTGAAGTGCTTGTCGTTAGATGGATCACAGATGGTTTGATGGTGGC
ATTGGATGTTTTGCAGTCCTAATGCATTGAGCTCTTGTAGAAATGACCAT
TTTGTCAAATGATAGATTTGCGCATTATTATGATAGGAGAAGCTGCTTTT
TCTACGGTCAAGGTCTATTTTTCTCAAAATTATTCATTTTCCTTATACCT
TAATTCACTTGGTCAGGTTTAGGAAACCAAGAAGCCTTTCGACATTTGAA
CTTTAAACTTTTTCAACGATTGCCGTTACAGTGGTATCCCAGACAAGATG
AATCTCTCAAAAAGAAATATTACTTTTGAAGTTTTCATTCAGAACAAAGT
TCTTCTGTGTCTCAGCGAGGTACAAATAGAGGCTTTTCTTTGTCTAAAAT
TCAACAAAATATGAAGAATCCCTGCCTGGTTGTTTAAAGTCCGTTTCATT
CTGAGACAAAAATATGTTCAGTTACCGTTTTTCTATAGAGTATTATTTTT
ATGTAATTCAAATGTTGTGGTGATATCAATACCAGGAGTTATGTACTGTA
TGGATATCAGTAAAGGCCGGTCTTCACTTGCGCGCGTCTCGATCGCACTT
TTTCGAGCAAAGCTTCCACGCTATTGCTCAAAAGAAAAATGAAGCAACTC
CATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTTGAAATGTGTGATCA
TCTTTTTTTTCGAGAGCGCGCTACATTTTTATGACGTAATCTTTTTTCCA
AGCAGCGCGCGCAAGTAGACACCGGCCTTAACTGTGTGTGGCATGCATTC
ATGGCATAAAAAAAAACGCGAAAAAAAATTGTGACTGCCTGTCACTCAAT
CAAATTCAATTTTCAGCTCATTATAAAAAGTGTTTTTGATATGCGTAAGT
CAAGAACTACGTTTTGTGACGATGGCACTCAAAAAATCTAAATATTTTTG
CTTTCGAAAAAGAGGACAAATTCTGGACTCATTGAGTATTTCCGATTTAT
CGTTAAAATAACCTTCTTTCCCAGCTTTATCGTTGCCAGTTTTCTGTTAC
TTACTGGTGACGTCAGATGATGTGTCTGTATCAGTAATACACGGAGCGAG
GATGCTGATAAAAAGAACGGAAACGTAATCTTGACTTTATGGATATCATG
AATTTCAGATTTGTTGTTTATATTTTTTGTTGTTATGTGATGCGACTCGT
TACAACAGCAATCATATGAAATTTGATGTTTTATTTTAAAAGAAAGATTT
TATTACTTGTCAACTATTATTAATATCTACTACCTATACCCATTTAATTT
ATGGAAAAAAGAAGCATTTTTTTATATACATTCACATGTTTCATTTCGTC
AATTTTAATTTAACCCTTTGACTTTCCAGGGGAAACTTAGTTCGTTCACG
AATTGTCAAGAGAGTAAACGGAAACCCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036869XLOC_036869Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058525-exon-scaffold_311-1575043694:375123..375239TCONS_00058525-exon-scaffold_311-1575043694:375123..375239Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1575043694:374940..375012TCONS_00058525-exon-scaffold_311-1575043694:374940..375012Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1575043694:374515..374571TCONS_00058525-exon-scaffold_311-1575043694:374515..374571Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1575043694:374228..374301TCONS_00058525-exon-scaffold_311-1575043694:374228..374301Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1575043694:373714..373837TCONS_00058525-exon-scaffold_311-1575043694:373714..373837Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1575043694:370582..370753TCONS_00058525-exon-scaffold_311-1575043694:370582..370753Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1575043694:368060..370121TCONS_00058525-exon-scaffold_311-1575043694:368060..370121Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:375123..375239TCONS_00058525-exon-scaffold_311-1510915933:375123..375239Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:374940..375012TCONS_00058525-exon-scaffold_311-1510915933:374940..375012Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:374515..374571TCONS_00058525-exon-scaffold_311-1510915933:374515..374571Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:374228..374301TCONS_00058525-exon-scaffold_311-1510915933:374228..374301Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:373714..373837TCONS_00058525-exon-scaffold_311-1510915933:373714..373837Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:370582..370753TCONS_00058525-exon-scaffold_311-1510915933:370582..370753Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1510915933:368060..370121TCONS_00058525-exon-scaffold_311-1510915933:368060..370121Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:375123..375239TCONS_00058525-exon-scaffold_311-1491911889:375123..375239Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:374940..375012TCONS_00058525-exon-scaffold_311-1491911889:374940..375012Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:374515..374571TCONS_00058525-exon-scaffold_311-1491911889:374515..374571Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:374228..374301TCONS_00058525-exon-scaffold_311-1491911889:374228..374301Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:373714..373837TCONS_00058525-exon-scaffold_311-1491911889:373714..373837Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:370582..370753TCONS_00058525-exon-scaffold_311-1491911889:370582..370753Clytia hemisphaericaexon
TCONS_00058525-exon-scaffold_311-1491911889:368060..370121TCONS_00058525-exon-scaffold_311-1491911889:368060..370121Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:368060..375239 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22.4282	6.91563	0.595089	0	0	0
Blast
[Close]
BLAST of TCONS_00058525 vs. Swiss-Prot (Human)
Match: MIER1 (Mesoderm induction early response protein 1 OS=Homo sapiens GN=MIER1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 1.182e-40
Identity = 80/201 (39.80%), Postives = 125/201 (62.19%), Query Frame = 1 
Query:  109 YQEEIQIGDNYQAEVDEGLTVYSKGEKTLDAGDKLLWTPSVISAEKLTSYLDLVYK-------LSEFGSQRSDRDDEQALFTLLQTR-DVSAALKK-RQEQDRQPPDVSLWSEEECQNFEQGLRVFGKDFRLIQKNKVQTRTVGEIVQFYYLWKKTERHDAFVTQTKLGRRKYTL-PGIADMMGRFMEESDPLFTNQPISP 681
            +++EI +G  +QAE+  G+  Y + EK  +  D+LLW P  +  +K+  +L    +       +         +D+EQAL+ L++   D   AL++ R        ++S+W+EEEC+NFEQGL+ +GKDF LIQ NKV+TR+VGE V FYY+WKK+ER+D F  QT+ G++KY L PG+ D M R ++ES+   +++  SP
Sbjct:  178 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSP 378
The following BLAST results are available for this feature:
BLAST of TCONS_00058525 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIER11.182e-4039.80Mesoderm induction early response protein 1 OS=Hom... [more]
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