TCONS_00058437 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058437
Unique NameTCONS_00058437
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1400

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058437 ID=TCONS_00058437|Name=TCONS_00058437|organism=Clytia hemisphaerica|type=transcript|length=1400bp
gaagaaaattttacttcttCTTTTGATGCATTTTGCTCTTTTTGAAGCAG
CGAAAATCGAAGAATCGAACACAACAGTTGGGGATACTGTTTATCATGTC
AAGAAAGTTGCGTTCAGAAGATATGACAATGTGATGCCGACTTCTGATGC
CAACACACACCAAAGTATTAGAGAAATCACCAATGCCACTTCACAggTTT
GTGGTACTGAATGTTATCGTGCAACGTCTTGCTGGAGCTTTTTGCTTTTT
CGCCACAAAACACCACCGACTTGCACTCTTATTGATGGACCAATCGATCG
AAGATATATGATCAAAAATTCAACCGTCGACTATTATGAAGTCTGGAATC
AATGTTCTTCAAACAATACCATCTGTAATCTGGGTATCTGTTTACCAAAT
TATGTGACAGATTCTTACACTTGTCATTGCCCATCCAGATACACTGGTGC
AAATTGTGAAACCCAAATCATTACATCGACATCAGCAGCGACGTCGGAAC
CTGCAACTACGACGCCGAAACCTGTAACTACGACATCGACGTTCGTTTTA
ACAACACCTGCAGAGCCTTTAGGGACTTTTGCGCGAGAAAATTCAAATCC
AGCCTTCACATATGCCAAGATACCAGATGATTGGCAGTTATCAATTGGGC
TGGAGATTAAAGGTCAAACTATGGTAAACAGTGGTGAACCCATAAGTATC
ATCCACCTGGTGTACGGTGACAACCCGTCCAATAAAcatgttttatttac
tttggttTATAACAAACATTTTGAGCTTCACTACAATGGAAATGAGCACC
CGATCCAAAGCCAAGGACCACCTCTGTTTCCTTCAGGACCTTTTGAACCA
TCCCGATCTTACACTTacaatgtgatttttgaattcacTAAGTCGTTAAA
CAAACTCAGTTGCACTATCAAATTCACTAACGGTCCGTTGAGCACATTCA
CCGTTGCGTCTGCTAAAGATCTTGATATCAGTCCAGTTTATGACCTTACA
AATGTTGAACTCTATGTTGGTTACCCTGATCACAGCAAATATACTGGAGA
GTACAATGTCCATGATGTTGTGGTGACAACAGTTGGAATATCCAACTTGG
TTTAAAGTTCCTtctaaacacccccttctcacaaacccatcaggaaccct
tcccactggaaaaactttcccaaaaattgttcccggtggaaaattatcct
ccaattttcgtccccattgaattttctgacttgaaaacaaaagaattgaa
atccccaggcATAAAAGACATTGGAATACCAATTCccatcgggtctgtga
gaagggggtgtttctAATATGAACCATACAGTGATTTCATAAAAAAGCGA
ACAATTCTTTAAGTATTTAAACCCCCTTTAAAGTAAAATCCTTATAATTC
Run BLAST on NCBI

protein sequence of TCONS_00058437-protein

>TCONS_00058437-protein ID=TCONS_00058437-protein|Name=TCONS_00058437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
KKILLLLLMHFALFEAAKIEESNTTVGDTVYHVKKVAFRRYDNVMPTSDA
NTHQSIREITNATSQVCGTECYRATSCWSFLLFRHKTPPTCTLIDGPIDR
RYMIKNSTVDYYEVWNQCSSNNTICNLGICLPNYVTDSYTCHCPSRYTGA
NCETQIITSTSAATSEPATTTPKPVTTTSTFVLTTPAEPLGTFARENSNP
AFTYAKIPDDWQLSIGLEIKGQTMVNSGEPISIIHLVYGDNPSNKHVLFT
LVYNKHFELHYNGNEHPIQSQGPPLFPSGPFEPSRSYTYNVIFEFTKSLN
KLSCTIKFTNGPLSTFTVASAKDLDISPVYDLTNVELYVGYPDHSKYTGE
YNVHDVVVTTVGISNLV
Run BLAST on NCBI

transcript from alignment at scaffold_311:243191..253170+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058437 ID=TCONS_00058437|Name=TCONS_00058437|organism=Clytia hemisphaerica|type=transcript|length=9980bp|location=Sequence derived from alignment at scaffold_311:243191..253170+ (Clytia hemisphaerica)
gaagaaaattttacttcttCTTTTGATGCATTTTGCTCTTTTTGAAGCAG
CGAAAATCGAAGAATCGAACACAACAGTTGGGGATACTGTTTATCATGTC
AAGAAAGTTGCGTTCAGAAGATATGACAATGTGATGCCGACTTCTGATGC
CAACACACACCAAAGTATTAGAGAAATCACCAATGCCACTTCACAGTAAG
TACCACATGCGACCGTAGGCAAGGTtttgggttcgatccccagccgagtc
ataccaaagattgccaaaatggtacttgatcctctctgcttgatgctcag
taacTAAAAaaacggatcaagggtaagtggagaaatccagggaaaggagt
gacGCCCTCCCCTACTTTCGGGTAGACagcttacttacttactttactta
AGCACCATATACTGCGTCCAGAAACATGGGGAATGTGCCTTTATCCGCCT
CTTATGTCATcccttagaccatgttcagacgttactgTTTGGTTTCGCTT
CGGTGTatttttcgttacggatcgagagtgttcggttttggaacgtttcg
gagcaagaaaacagaGCCGTTCCGTTCCAATGTAAAAAGCGGAGTGAAAC
CGTTTCGATTTGTTTTGCTTTCTAacctcttcttttttgacgtttcgaat
tttgacgttcacacttgtttcggaaccgtttccattcagagcgaaacgga
actgtaacgtctgaacatggtcttattgtttttatgttttggcCTGTCAC
ATAATTAAGATATATCATAGACATCTTACATAAAAcactacccagctggc
acacaacgtttttttgacgtttatctaacgttcacaacatccatataatg
ctagatgaacgttgaaacaacgtcgtgtgccagctgggtagacAGAGCTA
CTCTATAGATACCTTGGTTTTCactgttgaaacttttttgatacaCCAAC
AAtggtgtttcaaaaaaaaacatttgtttttatttcagggTTTGTGGTAC
TGAATGTTATCGTGCAACGTCTTGCTGGAGCTTTTTGCTTTTTCGCCACA
AAACACCACCGACTTGCACTCTTATTGATGGACCAATCGATCGAAGATAT
ATGATCAAAAATTCAACCGTCGACTATTATGAAGTCTGGGTAAGTTACcc
tatcggggaaaaaaattttggagttttatttagtcaggGTTTTTTTTTCG
CCGGAGAAAAATTTCGTTACCTacaggcattttcgtcacttttccccgac
gaaatttacaatttggtCACTCTCAtccaactaaattgtccaaatgaaat
ggtttcctgcACTAGCTTCGAAAATAGATTTTGTAATTTGACgtttaata
aaggtgtaaaacaTTTAGattttaaagtctgttcacgataagtgtgcact
cttttttcttttaactataacttttgaaggaattcttcaatttttataaa
tttggtatcattggaaagatattagtgagtggatcaatttgaaataaaca
agtctttaaacaaattctaaaaacgaagatgaaagTGAAGAAGAAAAAAA
TGAAGATCTTGTAGAGAAGTGCTATAactttcattttcactggagagatt
ctttgatcttaggagatcatcactgtgaaaaaatttcactaaaatattta
ttcaatataaagttatgatacaaactaataagtgattgaccccaaaaaca
gcagaaaacagcagaaaacagcagaaaacagcgtttttagacgtcaaatC
AGATTATaactttgcttgatatcttttgattgaatgattattttttagaa
attttttcacatgatgacgttcgataatgaaggattcacttcagtgaaaa
tgatagttatagcacctttctataagatcttcatttttttcttcttcatt
ttcattttcatttttagaatttgtttaaagatttttttatttcaaattga
tccACTTACTAatttctttccaatgataccaaatttataaagattgaaga
attgcttcaaaagttataggtaaatgaaaaaagagtgcacacttatcgtg
aatagactttaattttggttggggtttaaaaaattgggtaacagttttgg
tcggggataaaaaaatcgggtaaaattttcgtcgggtgataaaatattgg
ggagaaaattcgtcggggaaaattttcgtcgcgccctcaaaattttcgtc
actttccccgacatctttttccctgataaggtaaAAAGAACTGCACAAca
ggcgaaaaaaaaaaatagtgttTCTGGAAAGTGGGTGAAGGCTAAAAGCT
CTCATACGACCAgctgaaataaaacttttttgtgcTATTTTTGTTAACTt
aaaatcattgaaatagaactttaaagataacttttatgtacaaaaagTAT
CAAGTAAGCCTGAATACTAATACGTATCAATTACACACggacaaaacttg
atttacaggCGGGAATATTTAACCAagcgacgtttgatagcttgaacttt
ttttcacccggccggtttccggaaacactacattttttttaattttcgcc
tcatattcataacttttgaaaatatttatgtgTATTATGAAATCTGAACA
GTGTGACTAGATTATGGAcgaatttattttcattagagATGACcaccaga
tgacgtcatcaaattttgacatttccAAAATGGGAACCCCTCTAATTAtc
ttttaacttatttttttttcggcaaagtAGCTTTCAACCAAACGTAtttt
taatcgaaccaatcgaactttgtcgaacttaatcgaacttggTTGTCCAA
TTGATGTTCGACTAAGTTCggttgtcgaactttaatcgaataGTCATTCT
TATAAATACAAATTCTCCAAAGtataaagttcgattaaagaaattaaagg
aatcgaacttaatcgaacttaataAAACTTGATCGAGTTTAATAAAACAA
TAATTTGAGAAAATCCTTCGAACTTTTCTTATTGTCAAACTTTGTCGAAC
gtagttttttgtcgaatttgtcaaacatttcttgctgttgaactttgtcg
aacttaatatgtatgttttgtcgaacttaattgaATACTCACACAATTTT
AGGgacttttgaaaagttcgattaaataaTTTAAGATATAGATTAAGTTT
GACAAAGctcgattagttcggtaatcgaactgttcgattaattacgtctg
gtttCAAGAATTGAACGAGCCAATCACTTAATACGTGTTGATAGCCAAAT
TTGTATTCTGTTCTGTAAAATATTAACCAAACAGAATGAAAGTACCAATT
ATGTAAATCTACTACTGGTTAAAATTTCAAtagcatacatgtttttttta
taagaatatccaaaatttttgaagtcttcggatgttgttaactttttcgg
tttcgagcctaaaaatgttcctattttaaccaatttttgaccatttttac
ccattttcctaagaagttgaatgtttttgagtccattaagccttaaaatg
ttcttaacttgttcttattaacattttggccgtcgaagccttatgttgtt
atatagtttgttcttataaaaaaaacgtgtaacacattttgaaattttaa
gaggAACTCGAGGCTGCCCAAAAAGCTTTCCTTAGTAAGATATACGTCCA
GATGTAGAATTCAAAAACTTAAGTatctattttacagaccggtttGTAGA
CTACCAGAAAAAACAATTCTTTCAGCATATATTTCATCTTTTACAGAATC
AATGTTCTTCAAACAATACCATCTGTAATCTGGGTATCTGTTTACCAAAT
TATGTGACAGATTCTTACACTTGTCATTGCCCATCCAGATACACTGGTGC
AAATTGTGAAACCCAAATCATTACATGTGAGTTACTCAATACACAGGCTG
CAAAGTATCCCAactggcacacgacgttgtttcaacgtccatctaacgtt
atatggatgttgtgaacgttatataaacgtcaaaagacgttgtgtgccag
ctgggatgaaGTCGTCACGCTTTTACTGGacatttttatgtgcttgttat
atgacatttatttctgattagTTCAAATATATAATATTATATTTATAAAC
ACAggtaaagttatcagctgtaagttgtaaagcaagtaataacatgggaa
taaaatcacgagaactttttcgagtaatcacatgtttttactgcattgat
ataatttcgCAACCATGTATTACATTTTTGCAAACTGTATCATGGCGTTA
CTGAAAATACTACTTTAGTGAGATTAATTTTtacggggattaaatttcgc
ggttgagctcattcatgaaattttaagataatgcggggctctgaccatag
tgaatttttaatatttgccacctacaaaatatgaatttctgcctgatgta
gcggaaaaaactttgacatgttatacattttctgttaggccaactatccg
tgagtctaaaaatttaaaaatcacaatgctaaaatttgatgaaaaagaaa
atgaagacttttgcgaagaagagtatttcaactttgaggagcttagtttc
ggtgaagaaaaatacatttaaaaagatttttgcggtagatggtgtctttt
ttatcgaactaaaattaatttttcgggaaatctttctaaaagcttatttg
cttcaaaatcttgaaaatagtaattttcaccaattttccatcccaaattt
tcatagaaaaacaaccataacatttgatgcattaatttagaaaaattttc
cggaaattttaaaacagtttaattttttgctagcctggatatccaagctc
aaaatttaagaaaaaacaaaatttacctcaacatacaaagttcttaaatt
atagagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGAGA
ATGCaaaacgctctagggagaccaggctgtaaatcagaacataaaatatc
taaaactagactgtgaaataatttacagcctggatatccaggctaatttT
TTGCAGACAGTtcgaaaaaacttcgaaacaaaaaggttgacccattaaaa
cttagcactttgtataaaagaaggtgatgcaacgtctttttaaagttcat
aacgtcatttttgcaattaagttcttaattactcttaaggggggatttga
ttaaaaaacaatttataaaggcaattcttatttgttaaagggacataaaa
gtgttaaagaatctaaaaaataaGAGCCCTTGAATCCGCGGATGACTCTA
TTGTGACATTGTATTTTCACGACTTTGTGCTATTTTTGCTATTCTATTGC
CAAACTATGCCATGTTGAAATATGCATTATCAGCGCTTCTTTGATGGGCG
GTAAACATGTTAAAAGtagtcttttgaaattttttggaacTTAATTCAAA
AAAGCTTTTGTAGTCAAGGTCCGTGAAATCCGTGAAATCCTCGAAATTTA
ATCCTTGCGAAAACTAGTGCAGTTATTATGACAACACTAttccagctggc
acataacgttgtttcaacgtttatttaacgttcacaacgtccatataacg
ttagatgaacgttgaaacaacgttgtgtgccagctgggatgacACTACCG
TGCTGATATATATTAACCAAAATTCGGGAAAATAGTTACTTCATCAGTGG
ACTACTCTTagaggtgccaaataaacgggccccctgcttgttaatttttc
gaaaattttctgaCCCACCCGAACCTTCTTAggacccccctgtttattaa
ttattaagaatatttttagttaACAAGAAGAAGTCGCCTTATTTGGCTCC
AAAAAGTCTGATTTCaacctatatttaccttattttttggttttcagaag
tacaacaTCCAACCCTCCCCCGACAATTAGGTCcctccgtttattaaaat
ttcgaaaatgttCCAACCCCCTCCCCGTTTAAtcgaccccccgtttattc
gggATCTAAGATTACATGCAATATGAGTGGTGCTCTTACATGAAATTAAC
TGTTCAAATTTTGTCTTGATGAAGCGGCtactttttcatgttttatcaTT
ATTATGGGCTATTTCTCTTCAAGCGACATCAGCAGCGACGTCGGAACCTG
CAACTACGACGCCGAAACCTGTAACTACGACATCGACGTTCGTTTTAACA
ACACCTGCAGAGCCTTTAGGTATAAATGCTTAatatttctttctattttt
gtgGATATATCAAATCGGTTACAAGGTTTTGAGCAgtaaaaatttatgaa
atattAAACGTTGTCCATTTTGGGAGGCTTAAGAAAGATGCAAAAGTTTG
TACAGTAAAACATCCAATTAACAGAGACTCTAAAAAGCGGACGCCTCTGA
TTAGTGGACCAATTCAATTTTCCCCAACCATTTTCTAGTGGaatcctcat
aaaaaatgtCCCTCCAATGCTCCAATTAGCAGACCCTCCAACTAGTGGAC
GCAGACCTTAAAAAATAGACAAGATTGATTTGTCCAAACTATTTATTTCT
TAAACACTTCAAAGTGTCATTGAGAAAATTGCTTATAGACGTTTGGAGCG
CTCCCTTCATTCAGTCGGTGAATTTTACAGGGACCTCAAGACTACTATGA
TTCATGAAATAAAGATTTTAGCATTTAAATAATCATTCTCTTGTTCTTTC
ATACCCCTTTTGTATAATAGTGCCTTCTTTACCAAAATTAGAGCACATAA
TTGAAAAGTTTCCAAATGGCGGACACTTCTACTTAGCAGACATGATTCCG
TTTTCCCGATgatgcccagctggcacacgacgttgtttaaacgttaatat
aacgttatatggacgtagtgaacgttagatagacgttgaaacaacgttgt
gtgccagctggtgtCCAATAATTGGAGGTTCCACTGTAAATAAGAACGAG
TCGAGATTCGATACCTATAAAATGACATTATTTTTGATTACCAAAATCCA
AAAGCTACCTAAAATTGAGACCCTCATTTAATAGTAAAATTTCAATAGAA
TCTAAATAATGctaaaattttattagaacTACTCTTAGCTTCCAAATAAA
CATCCCCCTgcttcataatttttcaaaaattttctagcccccccccggac
cttattaagCCCCCAtgtttattagtttttaagaaTATAAGAATACAAAG
CTTGATTTTAGCCTACTATATACTCCCCAGGCAAATAGGTCCACTCCctc
gtttattaaaatttttattaattaccagctccccccgtttatttggaacc
taagagtaaacaCTGCAAAAAAAGACTTCAGACATGTACTGctatagcct
gggaatccaagcgttaaactttgttcacagtctagtttatgatattttcg
cTGCTTCTATattcttagaactttgtgaggtgaggtatttatgttttttt
ccaagattataagcttggattcccaggctagtacAGCTATTATTATATAG
ATAACTGCCTCATAAATTTCCATCAACACGACACTTTAAATAGGATTTAT
GTATTTCATAGGGACTTTTGCGCGAGAAAATTCAAATCCAGCCTTCACAT
ATGCCAAGATACCAGATGATTGGCAGTTATCAATTGGGGTGGAGATTGAA
GGTCAAATTATGGAAAACAGTGGTGAACCCATAAGTCTCATCCACTTGGT
GTACGGTGACAACCCGTCCAATAAAcatgttttatttactttggttTATA
ACAAACATTTAGAGGTAATAGCGCATCACAGTGTGAAAATGAAGTCCATG
CCAaatgttttatttgtttatacTGAGGTCTACGCCTCAAATAAGTTTTA
GGGGGGGACCGAATAAATTGGACGGGGTTTTGGGGGAGGCTGTAAGCCCC
CTCCCAAACGTGTCCAGGGAAAGCCCTGGAATATTTGATCTTCTCCCGCC
TCAAAGATNccctccatttgcctaagtcccccccccccgctatattctta
gaactttgtgaggtgaggtatttatGTTTTTTCCAAGATTAtaagcttgg
attcccaggctagtacggctattattATATAGATAACTGCCTCATAAATT
TCCATCAACACGACACTTTAAATAGAATTTATGTATTCCATAGGGGCTTT
TGCGCGAGAAAATTCAATTCCAGCCTTCACCTATGCCAACATACCAGATG
ATTGGCAGTTATCAATTGGGCTGGAGATTAAAGGTCAAACTATGGTAAAC
AGTGGTGAACCCATAAGTATCATCCACCTGGTGTACGGTGACAACCCGTC
CAATAAAcatgttttatttactttggttTATAACAAACATTTTGAGGTAA
TAGCGCATCACAGTGTGAAAATGAAGCCCATGCCGAATTGTTATTTGTTT
ATACTGAGGTCTacaccaaaaaaagtttcaattgtGGAATtttacggggg
ggggggggtttcccccccccccaaaaatcccccaatacaaattttttttt
ttttatactgAGGTCTAccccaaaaaaagtttcaattgtggaattttccg
ggggggggggggggaaaaaaaagtgGAGGGGTTTTGGGGGGGGCTGTAAG
CCCCCCTCCCAAACGTGTCCAGGGAAAGCCCTGGAATATTTGATCTTCTC
CCGCCTCAAAGATGCCCAAAATTTGCTATATTTTCTAgttttaagatgaa
aaaaaaacttttactctAATTTAATATATAAccaattttcaacctttttc
ttCAGCTTCACTACAATGGAAATGAGCACCCGATCCAAAGCCAAGGACCA
CCTCTGTTTCCTTCAGGACCTTTTGAACCATCCCGATCTTACACTTacaa
tgtgatttttgaattcacTAAGTCGTTAAACAAACTCAGTTGCACTATCA
AATTCACTAACGGTCCGTTGAGCACATTCACCGTTGCGTCTGCTAAAGAT
CTTGATATCAGTCCAGTTTATGACCTTACAAATGTTGAACTCTATGTTGG
TTACCCTGATCACAGCAAATATACTGGAGAGTACAATGTCCATGATGTTG
TGGTGACAACAGTTGGAATATCCAACTTGGTTTAAAGTTCCTtctaaaca
cccccttctcacaaacccatcaggaacccttcccactggaaaaactttcc
caaaaattgttcccggtggaaaattatcctccaattttcgtccccattga
attttctgacttgaaaacaaaagaattgaaatccccaggcATAAAAGACA
TTGGAATACCAATTCccatcgggtctgtgagaagggggtgtttctAATAT
GAACCATACAGTGATTTCATAAAAAAGCGAACAATTCTTTAAGTATTTAA
ACCCCCTTTAAAGTAAAATCCTTATAATTC

Coding sequence (CDS) from alignment at scaffold_311:243191..253170+

>TCONS_00058437 ID=TCONS_00058437|Name=TCONS_00058437|organism=Clytia hemisphaerica|type=CDS|length=7728bp|location=Sequence derived from alignment at scaffold_311:243191..253170+ (Clytia hemisphaerica)
aagaaaattttacttcttCTTTTGATGCATTTTGCTCTTTTTGAAGCAGC
GAAAATCGAAGAATCGAACACAACAGTTGGGGATACTGTTTATCATGTCA
AGAAAGTTGCGTTCAGAAGATATGACAATGTGATGCCGACTTCTGATGCC
AACACACACCAAAGTATTAGAGAAATCACCAATGCCACTTCACAggTTTG
TGGTACTGAATGTTATCGTGCAACGTCTTGCTGGAGCTTTTTGCTTTTTC
GCCACAAAACACCACCGACTTGCACTCTTATTGATGGACCAATCGATCGA
AGATATATGATCAAAAATTCAACCGTCGACTATTATGAAGTCTGGAATCA
ATGTTCTTCAAACAATACCATCTGTAATCTGGGTATCTGTTTACCAAATT
ATGTGACAGATTCTTACACTTGTCATTGCCCATCCAGATACACTGGTGCA
AATTGTGAAACCCAAATCATTACATCGACATCAGCAGCGACGTCGGAACC
TGCAACTACGACGCCGAAACCTGTAACTACGACATCGACGTTCGTTTTAA
CAACACCTGCAGAGCCTTTAGGGACTTTTGCGCGAGAAAATTCAAATCCA
GCCTTCACATATGCCAAGATACCAGATGATTGGCAGTTATCAATTGGGCT
GGAGATTAAAGGTCAAACTATGGTAAACAGTGGTGAACCCATAAGTATCA
TCCACCTGGTGTACGGTGACAACCCGTCCAATAAAcatgttttatttact
ttggttTATAACAAACATTTTGAGCTTCACTACAATGGAAATGAGCACCC
GATCCAAAGCCAAGGACCACCTCTGTTTCCTTCAGGACCTTTTGAACCAT
CCCGATCTTACACTTacaatgtgatttttgaattcacTAAGTCGTTAAAC
AAACTCAGTTGCACTATCAAATTCACTAACGGTCCGTTGAGCACATTCAC
CGTTGCGTCTGCTAAAGATCTTGATATCAGTCCAGTTTATGACCTTACAA
ATGTTGAACTCTATGTTGGTTACCCTGATCACAGCAAATATACTGGAGAG
TACAATGTCCATGATGTTGTGGTGACAACAGTTGGAATATCCAACTTGGT
TTAAaagaaaattttacttcttCTTTTGATGCATTTTGCTCTTTTTGAAG
CAGCGAAAATCGAAGAATCGAACACAACAGTTGGGGATACTGTTTATCAT
GTCAAGAAAGTTGCGTTCAGAAGATATGACAATGTGATGCCGACTTCTGA
TGCCAACACACACCAAAGTATTAGAGAAATCACCAATGCCACTTCACAgg
TTTGTGGTACTGAATGTTATCGTGCAACGTCTTGCTGGAGCTTTTTGCTT
TTTCGCCACAAAACACCACCGACTTGCACTCTTATTGATGGACCAATCGA
TCGAAGATATATGATCAAAAATTCAACCGTCGACTATTATGAAGTCTGGA
ATCAATGTTCTTCAAACAATACCATCTGTAATCTGGGTATCTGTTTACCA
AATTATGTGACAGATTCTTACACTTGTCATTGCCCATCCAGATACACTGG
TGCAAATTGTGAAACCCAAATCATTACATCGACATCAGCAGCGACGTCGG
AACCTGCAACTACGACGCCGAAACCTGTAACTACGACATCGACGTTCGTT
TTAACAACACCTGCAGAGCCTTTAGGGACTTTTGCGCGAGAAAATTCAAA
TCCAGCCTTCACATATGCCAAGATACCAGATGATTGGCAGTTATCAATTG
GGCTGGAGATTAAAGGTCAAACTATGGTAAACAGTGGTGAACCCATAAGT
ATCATCCACCTGGTGTACGGTGACAACCCGTCCAATAAAcatgttttatt
tactttggttTATAACAAACATTTTGAGCTTCACTACAATGGAAATGAGC
ACCCGATCCAAAGCCAAGGACCACCTCTGTTTCCTTCAGGACCTTTTGAA
CCATCCCGATCTTACACTTacaatgtgatttttgaattcacTAAGTCGTT
AAACAAACTCAGTTGCACTATCAAATTCACTAACGGTCCGTTGAGCACAT
TCACCGTTGCGTCTGCTAAAGATCTTGATATCAGTCCAGTTTATGACCTT
ACAAATGTTGAACTCTATGTTGGTTACCCTGATCACAGCAAATATACTGG
AGAGTACAATGTCCATGATGTTGTGGTGACAACAGTTGGAATATCCAACT
TGGTTTAAaagaaaattttacttcttCTTTTGATGCATTTTGCTCTTTTT
GAAGCAGCGAAAATCGAAGAATCGAACACAACAGTTGGGGATACTGTTTA
TCATGTCAAGAAAGTTGCGTTCAGAAGATATGACAATGTGATGCCGACTT
CTGATGCCAACACACACCAAAGTATTAGAGAAATCACCAATGCCACTTCA
CAggTTTGTGGTACTGAATGTTATCGTGCAACGTCTTGCTGGAGCTTTTT
GCTTTTTCGCCACAAAACACCACCGACTTGCACTCTTATTGATGGACCAA
TCGATCGAAGATATATGATCAAAAATTCAACCGTCGACTATTATGAAGTC
TGGAATCAATGTTCTTCAAACAATACCATCTGTAATCTGGGTATCTGTTT
ACCAAATTATGTGACAGATTCTTACACTTGTCATTGCCCATCCAGATACA
CTGGTGCAAATTGTGAAACCCAAATCATTACATCGACATCAGCAGCGACG
TCGGAACCTGCAACTACGACGCCGAAACCTGTAACTACGACATCGACGTT
CGTTTTAACAACACCTGCAGAGCCTTTAGGGACTTTTGCGCGAGAAAATT
CAAATCCAGCCTTCACATATGCCAAGATACCAGATGATTGGCAGTTATCA
ATTGGGCTGGAGATTAAAGGTCAAACTATGGTAAACAGTGGTGAACCCAT
AAGTATCATCCACCTGGTGTACGGTGACAACCCGTCCAATAAAcatgttt
tatttactttggttTATAACAAACATTTTGAGCTTCACTACAATGGAAAT
GAGCACCCGATCCAAAGCCAAGGACCACCTCTGTTTCCTTCAGGACCTTT
TGAACCATCCCGATCTTACACTTacaatgtgatttttgaattcacTAAGT
CGTTAAACAAACTCAGTTGCACTATCAAATTCACTAACGGTCCGTTGAGC
ACATTCACCGTTGCGTCTGCTAAAGATCTTGATATCAGTCCAGTTTATGA
CCTTACAAATGTTGAACTCTATGTTGGTTACCCTGATCACAGCAAATATA
CTGGAGAGTACAATGTCCATGATGTTGTGGTGACAACAGTTGGAATATCC
AACTTGGTTTAAaagaaaattttacttcttCTTTTGATGCATTTTGCTCT
TTTTGAAGCAGCGAAAATCGAAGAATCGAACACAACAGTTGGGGATACTG
TTTATCATGTCAAGAAAGTTGCGTTCAGAAGATATGACAATGTGATGCCG
ACTTCTGATGCCAACACACACCAAAGTATTAGAGAAATCACCAATGCCAC
TTCACAggTTTGTGGTACTGAATGTTATCGTGCAACGTCTTGCTGGAGCT
TTTTGCTTTTTCGCCACAAAACACCACCGACTTGCACTCTTATTGATGGA
CCAATCGATCGAAGATATATGATCAAAAATTCAACCGTCGACTATTATGA
AGTCTGGAATCAATGTTCTTCAAACAATACCATCTGTAATCTGGGTATCT
GTTTACCAAATTATGTGACAGATTCTTACACTTGTCATTGCCCATCCAGA
TACACTGGTGCAAATTGTGAAACCCAAATCATTACATCGACATCAGCAGC
GACGTCGGAACCTGCAACTACGACGCCGAAACCTGTAACTACGACATCGA
CGTTCGTTTTAACAACACCTGCAGAGCCTTTAGGGACTTTTGCGCGAGAA
AATTCAAATCCAGCCTTCACATATGCCAAGATACCAGATGATTGGCAGTT
ATCAATTGGGCTGGAGATTAAAGGTCAAACTATGGTAAACAGTGGTGAAC
CCATAAGTATCATCCACCTGGTGTACGGTGACAACCCGTCCAATAAAcat
gttttatttactttggttTATAACAAACATTTTGAGCTTCACTACAATGG
AAATGAGCACCCGATCCAAAGCCAAGGACCACCTCTGTTTCCTTCAGGAC
CTTTTGAACCATCCCGATCTTACACTTacaatgtgatttttgaattcacT
AAGTCGTTAAACAAACTCAGTTGCACTATCAAATTCACTAACGGTCCGTT
GAGCACATTCACCGTTGCGTCTGCTAAAGATCTTGATATCAGTCCAGTTT
ATGACCTTACAAATGTTGAACTCTATGTTGGTTACCCTGATCACAGCAAA
TATACTGGAGAGTACAATGTCCATGATGTTGTGGTGACAACAGTTGGAAT
ATCCAACTTGGTTTAAaagaaaattttacttcttCTTTTGATGCATTTTG
CTCTTTTTGAAGCAGCGAAAATCGAAGAATCGAACACAACAGTTGGGGAT
ACTGTTTATCATGTCAAGAAAGTTGCGTTCAGAAGATATGACAATGTGAT
GCCGACTTCTGATGCCAACACACACCAAAGTATTAGAGAAATCACCAATG
CCACTTCACAggTTTGTGGTACTGAATGTTATCGTGCAACGTCTTGCTGG
AGCTTTTTGCTTTTTCGCCACAAAACACCACCGACTTGCACTCTTATTGA
TGGACCAATCGATCGAAGATATATGATCAAAAATTCAACCGTCGACTATT
ATGAAGTCTGGAATCAATGTTCTTCAAACAATACCATCTGTAATCTGGGT
ATCTGTTTACCAAATTATGTGACAGATTCTTACACTTGTCATTGCCCATC
CAGATACACTGGTGCAAATTGTGAAACCCAAATCATTACATCGACATCAG
CAGCGACGTCGGAACCTGCAACTACGACGCCGAAACCTGTAACTACGACA
TCGACGTTCGTTTTAACAACACCTGCAGAGCCTTTAGGGACTTTTGCGCG
AGAAAATTCAAATCCAGCCTTCACATATGCCAAGATACCAGATGATTGGC
AGTTATCAATTGGGCTGGAGATTAAAGGTCAAACTATGGTAAACAGTGGT
GAACCCATAAGTATCATCCACCTGGTGTACGGTGACAACCCGTCCAATAA
AcatgttttatttactttggttTATAACAAACATTTTGAGCTTCACTACA
ATGGAAATGAGCACCCGATCCAAAGCCAAGGACCACCTCTGTTTCCTTCA
GGACCTTTTGAACCATCCCGATCTTACACTTacaatgtgatttttgaatt
cacTAAGTCGTTAAACAAACTCAGTTGCACTATCAAATTCACTAACGGTC
CGTTGAGCACATTCACCGTTGCGTCTGCTAAAGATCTTGATATCAGTCCA
GTTTATGACCTTACAAATGTTGAACTCTATGTTGGTTACCCTGATCACAG
CAAATATACTGGAGAGTACAATGTCCATGATGTTGTGGTGACAACAGTTG
GAATATCCAACTTGGTTTAAaagaaaattttacttcttCTTTTGATGCAT
TTTGCTCTTTTTGAAGCAGCGAAAATCGAAGAATCGAACACAACAGTTGG
GGATACTGTTTATCATGTCAAGAAAGTTGCGTTCAGAAGATATGACAATG
TGATGCCGACTTCTGATGCCAACACACACCAAAGTATTAGAGAAATCACC
AATGCCACTTCACAggTTTGTGGTACTGAATGTTATCGTGCAACGTCTTG
CTGGAGCTTTTTGCTTTTTCGCCACAAAACACCACCGACTTGCACTCTTA
TTGATGGACCAATCGATCGAAGATATATGATCAAAAATTCAACCGTCGAC
TATTATGAAGTCTGGAATCAATGTTCTTCAAACAATACCATCTGTAATCT
GGGTATCTGTTTACCAAATTATGTGACAGATTCTTACACTTGTCATTGCC
CATCCAGATACACTGGTGCAAATTGTGAAACCCAAATCATTACATCGACA
TCAGCAGCGACGTCGGAACCTGCAACTACGACGCCGAAACCTGTAACTAC
GACATCGACGTTCGTTTTAACAACACCTGCAGAGCCTTTAGGGACTTTTG
CGCGAGAAAATTCAAATCCAGCCTTCACATATGCCAAGATACCAGATGAT
TGGCAGTTATCAATTGGGCTGGAGATTAAAGGTCAAACTATGGTAAACAG
TGGTGAACCCATAAGTATCATCCACCTGGTGTACGGTGACAACCCGTCCA
ATAAAcatgttttatttactttggttTATAACAAACATTTTGAGCTTCAC
TACAATGGAAATGAGCACCCGATCCAAAGCCAAGGACCACCTCTGTTTCC
TTCAGGACCTTTTGAACCATCCCGATCTTACACTTacaatgtgatttttg
aattcacTAAGTCGTTAAACAAACTCAGTTGCACTATCAAATTCACTAAC
GGTCCGTTGAGCACATTCACCGTTGCGTCTGCTAAAGATCTTGATATCAG
TCCAGTTTATGACCTTACAAATGTTGAACTCTATGTTGGTTACCCTGATC
ACAGCAAATATACTGGAGAGTACAATGTCCATGATGTTGTGGTGACAACA
GTTGGAATATCCAACTTGGTTTAAaagaaaattttacttcttCTTTTGAT
GCATTTTGCTCTTTTTGAAGCAGCGAAAATCGAAGAATCGAACACAACAG
TTGGGGATACTGTTTATCATGTCAAGAAAGTTGCGTTCAGAAGATATGAC
AATGTGATGCCGACTTCTGATGCCAACACACACCAAAGTATTAGAGAAAT
CACCAATGCCACTTCACAggTTTGTGGTACTGAATGTTATCGTGCAACGT
CTTGCTGGAGCTTTTTGCTTTTTCGCCACAAAACACCACCGACTTGCACT
CTTATTGATGGACCAATCGATCGAAGATATATGATCAAAAATTCAACCGT
CGACTATTATGAAGTCTGGAATCAATGTTCTTCAAACAATACCATCTGTA
ATCTGGGTATCTGTTTACCAAATTATGTGACAGATTCTTACACTTGTCAT
TGCCCATCCAGATACACTGGTGCAAATTGTGAAACCCAAATCATTACATC
GACATCAGCAGCGACGTCGGAACCTGCAACTACGACGCCGAAACCTGTAA
CTACGACATCGACGTTCGTTTTAACAACACCTGCAGAGCCTTTAGGGACT
TTTGCGCGAGAAAATTCAAATCCAGCCTTCACATATGCCAAGATACCAGA
TGATTGGCAGTTATCAATTGGGCTGGAGATTAAAGGTCAAACTATGGTAA
ACAGTGGTGAACCCATAAGTATCATCCACCTGGTGTACGGTGACAACCCG
TCCAATAAAcatgttttatttactttggttTATAACAAACATTTTGAGCT
TCACTACAATGGAAATGAGCACCCGATCCAAAGCCAAGGACCACCTCTGT
TTCCTTCAGGACCTTTTGAACCATCCCGATCTTACACTTacaatgtgatt
tttgaattcacTAAGTCGTTAAACAAACTCAGTTGCACTATCAAATTCAC
TAACGGTCCGTTGAGCACATTCACCGTTGCGTCTGCTAAAGATCTTGATA
TCAGTCCAGTTTATGACCTTACAAATGTTGAACTCTATGTTGGTTACCCT
GATCACAGCAAATATACTGGAGAGTACAATGTCCATGATGTTGTGGTGAC
AACAGTTGGAATATCCAACTTGGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036822XLOC_036822Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058437-proteinTCONS_00058437-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058437-exon-scaffold_311-1491911889:243191..243385TCONS_00058437-exon-scaffold_311-1491911889:243191..243385Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:243191..243385TCONS_00058437-exon-scaffold_311-1510915933:243191..243385Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:243191..243385TCONS_00058437-exon-scaffold_311-1575043694:243191..243385Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1491911889:244179..244329TCONS_00058437-exon-scaffold_311-1491911889:244179..244329Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:244179..244329TCONS_00058437-exon-scaffold_311-1510915933:244179..244329Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:244179..244329TCONS_00058437-exon-scaffold_311-1575043694:244179..244329Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1491911889:246937..247066TCONS_00058437-exon-scaffold_311-1491911889:246937..247066Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:246937..247066TCONS_00058437-exon-scaffold_311-1510915933:246937..247066Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:246937..247066TCONS_00058437-exon-scaffold_311-1575043694:246937..247066Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1491911889:249914..250009TCONS_00058437-exon-scaffold_311-1491911889:249914..250009Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:249914..250009TCONS_00058437-exon-scaffold_311-1510915933:249914..250009Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:249914..250009TCONS_00058437-exon-scaffold_311-1575043694:249914..250009Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1491911889:251352..251398TCONS_00058437-exon-scaffold_311-1491911889:251352..251398Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:251352..251398TCONS_00058437-exon-scaffold_311-1510915933:251352..251398Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:251352..251398TCONS_00058437-exon-scaffold_311-1575043694:251352..251398Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1491911889:251981..252136TCONS_00058437-exon-scaffold_311-1491911889:251981..252136Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:251981..252136TCONS_00058437-exon-scaffold_311-1510915933:251981..252136Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:251981..252136TCONS_00058437-exon-scaffold_311-1575043694:251981..252136Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1491911889:252546..253170TCONS_00058437-exon-scaffold_311-1491911889:252546..253170Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1510915933:252546..253170TCONS_00058437-exon-scaffold_311-1510915933:252546..253170Clytia hemisphaericaexon
TCONS_00058437-exon-scaffold_311-1575043694:252546..253170TCONS_00058437-exon-scaffold_311-1575043694:252546..253170Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:243191..253170 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.10123	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.583615	0	0.262934	0	0	0.507974	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058437 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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