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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058592 ID=TCONS_00058592|Name=TCONS_00058592|organism=Clytia hemisphaerica|type=transcript|length=847bp
ATTTCCTTCCTtctgaaaataaatttctttccttCTGAATTCACGTTTAC
TTGAACTTTATTTTCTAACAAAACAGAGATAGTTTCATACCACTTCTGAT
AAGATGCGTAAAGATTTAATGCGGATTTTCTGCCAAGGAAATATTCATTA
ACACCCCAAATCAATTTATCTTCCTTTGTAGCAACAATTGATTTTTCTGG
CTTTTTCATCGCTTCTGCCATACTGGCGTTAAtgcttttcaatatttcaa
tttcGTGACGAAGTGCTTGGATCGCCAGCTCTTTCTCTCTTTCCATCTGT
TCGAGTTTGATCTTATTGGTATTCTCCAAATCCTTGGCTTTCAACTTGAA
TTCGTTTTCTTTGGCAGCAATTTGTTTCTTCATTTCAGCAAGCTTGGTTT
GGTACTCGTGCTCTTTTGCCAGAGTTGCTTTCtccatttcattgattttt
gttttgcgtTCGTTTTCCTTGGCAACAATTTCCTTGTCTTTTGCAACCAG
ATCCTTGTCTTTATCGGCCAGTTTGTTCTGAAACTCTTTCTGCTGTTTCA
GTATTTCTTTCTCCATTTCGCGATCAACCACACCGCCCTTAGCCTCCATC
TCATGGGCGGTCTTCAACTTGACCAGCTCAAGTTCATGGGTTAACGATTG
ATTGTCCTTTTCAAGCTGCAAAATCTTCATCTTCTGCTCTTTATCCTGTT
TGGACATTTCTTTCTCCAGCTCCAGGGTTTTGATACGACTTTCAAATGTC
AATTTTTGAATCTGCTTCTCGTGTTTCTCTTTAAGTTTTTCAATCTCGAT
ACTATCAGTATTCCTGGCGATATTTCTTCCAGTTGCGCTATGTGCCA Run BLAST on NCBI protein sequence of TCONS_00058592-protein >TCONS_00058592-protein ID=TCONS_00058592-protein|Name=TCONS_00058592-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
AHSATGRNIARNTDSIEIEKLKEKHEKQIQKLTFESRIKTLELEKEMSKQ
DKEQKMKILQLEKDNQSLTHELELVKLKTAHEMEAKGGVVDREMEKEILK
QQKEFQNKLADKDKDLVAKDKEIVAKENERKTKINEMEKATLAKEHEYQT
KLAEMKKQIAAKENEFKLKAKDLENTNKIKLEQMEREKELAIQALRHEIE
ILKSINASMAEAMKKPEKSIVATKEDKLIWGVNEYFLGRKSALNLYASYQ
KWYETISVLLENKVQVNVNSEGKKFIFRRKE Run BLAST on NCBI transcript from alignment at scaffold_311:178632..179478 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058592 ID=TCONS_00058592|Name=TCONS_00058592|organism=Clytia hemisphaerica|type=transcript|length=847bp|location=Sequence derived from alignment at scaffold_311:178632..179478 (Clytia hemisphaerica)
TGGCACATAGCGCAACTGGAAGAAATATCGCCAGGAATACTGATAGTATC
GAGATTGAAAAACTTAAAGAGAAACACGAGAAGCAGATTCAAAAATTGAC
ATTTGAAAGTCGTATCAAAACCCTGGAGCTGGAGAAAGAAATGTCCAAAC
AGGATAAAGAGCAGAAGATGAAGATTTTGCAGCTTGAAAAGGACAATCAA
TCGTTAACCCATGAACTTGAGCTGGTCAAGTTGAAGACCGCCCATGAGAT
GGAGGCTAAGGGCGGTGTGGTTGATCGCGAAATGGAGAAAGAAATACTGA
AACAGCAGAAAGAGTTTCAGAACAAACTGGCCGATAAAGACAAGGATCTG
GTTGCAAAAGACAAGGAAATTGTTGCCAAGGAAAACGAacgcaaaacaaa
aatcaatgaaatggaGAAAGCAACTCTGGCAAAAGAGCACGAGTACCAAA
CCAAGCTTGCTGAAATGAAGAAACAAATTGCTGCCAAAGAAAACGAATTC
AAGTTGAAAGCCAAGGATTTGGAGAATACCAATAAGATCAAACTCGAACA
GATGGAAAGAGAGAAAGAGCTGGCGATCCAAGCACTTCGTCACgaaattg
aaatattgaaaagcaTTAACGCCAGTATGGCAGAAGCGATGAAAAAGCCA
GAAAAATCAATTGTTGCTACAAAGGAAGATAAATTGATTTGGGGTGTTAA
TGAATATTTCCTTGGCAGAAAATCCGCATTAAATCTTTACGCATCTTATC
AGAAGTGGTATGAAACTATCTCTGTTTTGTTAGAAAATAAAGTTCAAGTA
AACGTGAATTCAGaaggaaagaaatttattttcagaAGGAAGGAAAT Coding sequence (CDS) from alignment at scaffold_311:178632..179478 >TCONS_00058592 ID=TCONS_00058592|Name=TCONS_00058592|organism=Clytia hemisphaerica|type=CDS|length=843bp|location=Sequence derived from alignment at scaffold_311:178632..179478 (Clytia hemisphaerica)
GCACATAGCGCAACTGGAAGAAATATCGCCAGGAATACTGATAGTATCGA
GATTGAAAAACTTAAAGAGAAACACGAGAAGCAGATTCAAAAATTGACAT
TTGAAAGTCGTATCAAAACCCTGGAGCTGGAGAAAGAAATGTCCAAACAG
GATAAAGAGCAGAAGATGAAGATTTTGCAGCTTGAAAAGGACAATCAATC
GTTAACCCATGAACTTGAGCTGGTCAAGTTGAAGACCGCCCATGAGATGG
AGGCTAAGGGCGGTGTGGTTGATCGCGAAATGGAGAAAGAAATACTGAAA
CAGCAGAAAGAGTTTCAGAACAAACTGGCCGATAAAGACAAGGATCTGGT
TGCAAAAGACAAGGAAATTGTTGCCAAGGAAAACGAacgcaaaacaaaaa
tcaatgaaatggaGAAAGCAACTCTGGCAAAAGAGCACGAGTACCAAACC
AAGCTTGCTGAAATGAAGAAACAAATTGCTGCCAAAGAAAACGAATTCAA
GTTGAAAGCCAAGGATTTGGAGAATACCAATAAGATCAAACTCGAACAGA
TGGAAAGAGAGAAAGAGCTGGCGATCCAAGCACTTCGTCACgaaattgaa
atattgaaaagcaTTAACGCCAGTATGGCAGAAGCGATGAAAAAGCCAGA
AAAATCAATTGTTGCTACAAAGGAAGATAAATTGATTTGGGGTGTTAATG
AATATTTCCTTGGCAGAAAATCCGCATTAAATCTTTACGCATCTTATCAG
AAGTGGTATGAAACTATCTCTGTTTTGTTAGAAAATAAAGTTCAAGTAAA
CGTGAATTCAGaaggaaagaaatttattttcagaAGGAAGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058592-exon-scaffold_311-1491911889:178632..179478 | TCONS_00058592-exon-scaffold_311-1491911889:178632..179478 | Clytia hemisphaerica | exon |
| TCONS_00058592-exon-scaffold_311-1510915933:178632..179478 | TCONS_00058592-exon-scaffold_311-1510915933:178632..179478 | Clytia hemisphaerica | exon |
| TCONS_00058592-exon-scaffold_311-1575043694:178632..179478 | TCONS_00058592-exon-scaffold_311-1575043694:178632..179478 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:178632..179478 . |
Blast
The following BLAST results are available for this feature:
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