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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058251 ID=TCONS_00058251|Name=TCONS_00058251|organism=Clytia hemisphaerica|type=transcript|length=4848bp
TCTTGATTTAAGTTGCTCCTAGTCCTAGATGTGACCCATTCTGTCATGAC
TTGATATAAAAAGGATTCCATTTCATATAACAATTAACATTTTTTCCCTT
TATTTTTAGCaacaattaataaaaaaatgttcagGCTAATAGCAAGTAAA
TCACTGCTGAGACCAAGATTATCACACATTTCAAGCAGATGTCAATCAGA
TAGCTCTTCAAGTGAACCACCTGTTGTAGAAAAGACTTTTCGTGAAAAAG
CACGAGATACATGGAATGGACCAACGTTCAAATATTGGCTGATTGGTGGC
GGTGGTTTTATCAGTTGGCTCGCCTACTATAGCTATCAGGCATATAAGAA
CAAATGCATTGATATAGAGTTGCCACCTCCATTACCAAACCATCTGTTAA
TCGACAGGAAAAAAGAATTTGAGAATTTGACAGACAAATATAATGCGCAA
GACACAATGTTTTCGACACAAAAAGTCAAGAAATTGTTGATTCATGGTCC
ATCTTGCAGTGGGAAAACAGTTTTTGCAAACCAATTTATTAAGCAtttaa
aactaaaacaaaaatcGACGCTTCAACTACCTGTTTCCAATGTGACATTG
TTCCTACAAACTGATACTGAAACCTCCTTTCTCATTTCTTTAAAATCTGC
AGCTGCAAAACTTGAAGTATCAAAAACTGATTTAGATGAGGGTATGCAAA
GTGGATCCTTTAGTGAGGGAACATTTAAAGAGCAGTGTAatgttttaatt
gaaaacatcCAAGATAAGTTATCCAAACACCCTGGATGGGTAATCATCTT
TGATCAATTACAATCAACCAGTCCAACCACTGTTCTTGAAATATTGAATA
GCTGTATCGAAGACGAAGAGAGCTGGAGCTCGGGTTTGTTCCTGGTTGTT
GCTGACGGTGTGGATCCGAAGACAGTTGCCATCAATAAGCAATCAGCCAT
TTCTCTGCAGAAAGGGATGTCTGTAGAAGATGGTGTTCAACTCTTGAAAA
ACTTTGTGAATGTTGACGGGAATGTGGCATCATTGAGTTTACTGGTGGAG
AAGGTGTTTGGCAATCCGTTGGCTTTACTTTGTAATGCAGTGCTGCTGAA
AAAGAAACTAGCAATGAAGCAGGTTCAAAGTATTGATGACGCAGTGAAAG
AAATTTGTgatgaaattgatgaaaatgtCAATCGAGTAATCTCGCAGAAC
CAACACCTCTCTGCTTTCACTTCCACTTATTCAGGACGGAAACTTGTCAC
CATCGAATCTGTTGTTGCCATTCTAATGAAAGATATCATAAAGGAAAGTC
CTTATTTATACAATGGCATTGACCTGATGGCAGCAATGGCACCAGGGACT
GCCATACCACAACAAGCCATTACTCGACATCTTGCATCTTCATTCTACAA
ACTACCATCACTTGCAAAACCACCAAACATTTTGGATTTCATGAACAAAC
AGCAAAGAGATGCGGACGACGTCAAGCAAAATGCTGATGAATTTGATCCC
AAAGGAAAAGCATGGTCCAATAAAAACCTGGTGCACTACATACAGAAAGT
GGAGGAGTTTTTTGAGACGGTGTATAAGACGATGAAGGAAATTTATTTCT
TGGTGTATGGTGTGTTACCAGAGCTTCCAAAAGGTGATGATGGAATGGGA
ATGTTCTCAGAATGTGTTCTCATTCAATCAAGTGTCGTCCAACCAGGAGA
TGTAAACACATTCAGTCTGCACCCAATAGTGTACAACGTAGCACGACAAC
ATTTCATGGCGAAAACCCTGGTCGACATTGAAGAGAAGAATGTGCGCGAA
AACAAAGATTTCCATCAAAACAAATCTTGGTATCGAAAATTGAGCGATTT
CAACGAGCAAACGATACTCCAACAATATCGTAATTCGGCTGGTCATGGTG
AGATCAAAAAGATGTTATCAGATGACGATGCCAACAGTTTATTGTTCCGA
TTCAATCTTGGTATTGATGTCTCTTGTCTGTTCAAAGAGGATGAAAACAC
CAGCCAGGATGCTTGCTGGGATGGAAAACCAGTGGAAAAAGTCGGTCTTC
TCCAAGATCATTTGACCAGGATCACAGATTCTCTTTGCGAACAGATGAAT
GTGACCAAGGGTGATCTCAATGGTCATACTGTCAAGAAAATATTGATGCT
TCATTTAGAATACATTctaaaaaatcaaccttttgAGTTATTGGGAGCCA
GAAATCAAAGCAAGATTTTATTTGCATTAGCTAAAGCNATGAGTTGTTGG
GAGCCAGAAATCAAAGCAAGATTCTATTTGCATTAGCTAAAGCATACAAc
agtgtttacaaagattttgaTGCTTGTAAGGAACTGATTGATCAGGTTTT
ATCTATGCAGCAATCCCTACCAGATACTGATCCTTTGGACATTGCCAGAA
CTTTGGCAGAAAAAGCACAGTACTTAATTAACAAGGAGGATTATGAAACT
GCTAAAACTACTTTGTTGGAAGCTTCTGATATCTATGAAGCACAAAGGAA
GAAGTTTGGTGAATATAAGTTTCCTATTGAGTATGGTAAATTGTTGGGAA
TGCTAGGTGCTGTTTATGGCAGCTTGAGTATGAAGATTGAGAGCAAGGAG
ACAATCGAGCGCGCTCTGATGATGCAGCAATCAATCCCTCCTGATATGAC
GGATGaagagaaaagtaaaaaatttggagCTGATTTCGCCAGCATATTGA
TCGACTTAGCACACGCCTATGTTTCTCTTGGACTACCTTTGTATGGTAAG
AAAATAGTCGATCTTGCTTTGACTGCTCAGAAGAACTTGAACGGTGAGGA
CCATCCAGAGGTTGTGAGAGCTTTAACTGTCTTAGCAATGGCTCATTTGA
TGCAAGGCCATAATGAAGAATCTAAAAAACATCGCAAAGAAGCTGATAAG
CATAAAAAAGTAATGATTGTTGAATGGCACGCAAGAAGCTGGTGCTCATC
TTCATCCTAGTCTCACTTACGTTTCTGGTGATCCAGCTGTTATCTACCGA
TATCTTTTCCATCAGTAATAAACAGGCTCCCAAAGCACAGGTGTCAAGTG
GTATTAGTGATACAGACTTGAGATTCTCTGTGAGTGAGCTTTTAACTGTT
TGCAGAAACGTTGGTATTAAATGTGTTGTAGGAGACATTGATTGGTTGCA
GACGTTTGCTGCGTCAAGACATAAAGACCACGATGAAGATTGCAAATATC
TTTGTGCTGGCAATTTCATGTCCTTCTTGATCGAAGGTGACTCTTTGAAA
AATGGGAGATTCGAATACTTGATTCGAAAACTCGTCAAAGTTGGATTCGA
AGTTCGAAAAGACGCACGTCAAGACGAGCGTCAATTATCCCTTGAGAAAC
GAATGACGTCATCTATCCTTGTCTATCATCTTTATTTACGGAAAAACGAC
CATTTCTTTTTGATGACTTTTCAGTACGAACGGTTGGGACTTTTGTGGAG
CAATGCGTGCGATTTGAGTAAACTTCGtgatgaaaaacaaaagaagatgG
TTTCAACGTCTACATTTTGTTCTCAACGTCTGATACCAACTTTCAAAACC
TCTTCAGCTCGTATCGATGGATTGAATGTACACATCCCCAAAGCTATTTT
CTCATTTATCGAGATTGTGAAAAACGGTATATATGTGCCTTGCCCTCTTC
AACACGCTCGACAATTTTACTCCAAGTACGGCTACAGAAGTGACCCTATC
AGTGAAAAGTTTCGAATCAAAGCTAAAAATTTACTAACAATAGCGATCGA
CGTTTTAGGGCAACTTAGGATACCATTTTGGTTGTCAAGTGGAACTTGTT
TAGGATGGTTTCGTCAATGTGACGTCATCCCACATAGCAAGGACGTTGAT
ATTGGGATATGGATCAAACACTACAAGAAGGATCTGATCAAAGCTTTCCT
GGATAATGGTCTCAAACTGAAACACCAGTTCGGCAAAGTGGAAGATAGTT
TCGAATTATCTTTCACTTTGAATGATTTGAAGttagacatttttttcttt
tacaaggAAGAGGGAATTATGTGGAATGGTGGTACGCAAGCCAGaactgg
aaaaaaattcaaatatattttccccGAGTTCTCTTTGTGTTGGTCACACT
TACTGGACTTGACCGTTCGTGTGCCATGCCCAACTAAACCATACGTGCTA
GCGAATTACGGTCACGATTGGGATAAACGTGTTGAGAAATGGGATTGGAA
AGCTAGTCCACCGAATGTGGAACCAAACGGCGAGTGGCCTGCAGAAGAAC
GGAAACAAGTGATTCAAGTTTATTGAGATGGAGCTCTTGGCGCTGTGAAA
TTTGTCATTTATCTTTGTCATATTTAATACTTCTTCATATGttcgtttta
attttcaactccTGGCTACGAAGCTCctaaattttcaatcttttcaagta
agggaactaattttcgcgggaactagtTTTTGCGGGAACTAGTTTTTGTG
GGAACTAGTTTTTGCGGGAACTAGTTTTTGCGGGAACTAGTTTTTgtgga
acttattttcgcggtgCGAGGGTACTAAATTAGCGCTTTTTGTGCTACTA
ATTTTCACGGTTGACAACCTCTTTTTGTAGAAAtcctttcatttttcttt
gggtatttgaagatttttagtaaaaattgcatttcgaggaactaattttt
gcggtagGTGAACATttagttcccgctaaaatttgGTTTGCTGGAAATTT
TTTGCAAATCTTCTCAGTACAAACCTTTTATTGGATTTCGAGGATAATTA
TTTTTAGATAGAATATATATTTtacagtttatttatttttaaaagcattt
tttaaatagtttttgtACGTTCGAttgtaaaaatgttgaaatgatCTG Run BLAST on NCBI protein sequence of TCONS_00058251-protein >TCONS_00058251-protein ID=TCONS_00058251-protein|Name=TCONS_00058251-protein|organism=Clytia hemisphaerica|type=polypeptide|length=719bp
MFRLIASKSLLRPRLSHISSRCQSDSSSSEPPVVEKTFREKARDTWNGPT
FKYWLIGGGGFISWLAYYSYQAYKNKCIDIELPPPLPNHLLIDRKKEFEN
LTDKYNAQDTMFSTQKVKKLLIHGPSCSGKTVFANQFIKHLKLKQKSTLQ
LPVSNVTLFLQTDTETSFLISLKSAAAKLEVSKTDLDEGMQSGSFSEGTF
KEQCNVLIENIQDKLSKHPGWVIIFDQLQSTSPTTVLEILNSCIEDEESW
SSGLFLVVADGVDPKTVAINKQSAISLQKGMSVEDGVQLLKNFVNVDGNV
ASLSLLVEKVFGNPLALLCNAVLLKKKLAMKQVQSIDDAVKEICDEIDEN
VNRVISQNQHLSAFTSTYSGRKLVTIESVVAILMKDIIKESPYLYNGIDL
MAAMAPGTAIPQQAITRHLASSFYKLPSLAKPPNILDFMNKQQRDADDVK
QNADEFDPKGKAWSNKNLVHYIQKVEEFFETVYKTMKEIYFLVYGVLPEL
PKGDDGMGMFSECVLIQSSVVQPGDVNTFSLHPIVYNVARQHFMAKTLVD
IEEKNVRENKDFHQNKSWYRKLSDFNEQTILQQYRNSAGHGEIKKMLSDD
DANSLLFRFNLGIDVSCLFKEDENTSQDACWDGKPVEKVGLLQDHLTRIT
DSLCEQMNVTKGDLNGHTVKKILMLHLEYILKNQPFELLGARNQSKILFA
LAKXMSCWEPEIKARFYLH Run BLAST on NCBI transcript from alignment at scaffold_309:576065..582078+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058251 ID=TCONS_00058251|Name=TCONS_00058251|organism=Clytia hemisphaerica|type=transcript|length=6014bp|location=Sequence derived from alignment at scaffold_309:576065..582078+ (Clytia hemisphaerica)
TCTTGATTTAAGTTGCTCCTAGTCCTAGATGTGACCCATTCTGTCATGAC
TTGATATAAAAAGGATTCCATTTCATATAACAATTAACATTTTTTCCCTT
TATTTTTAGCaacaattaataaaaaaatgttcagGCTAATAGCAAGTAAA
TCACTGCTGAGACCAAGATTATCACACATTTCAAGCAGATGTCAATCAGA
TAGCTCTTCAAGTGAACCACCTGTTGTAGAAAAGACTTTTCGTGAAAAAG
CACGAGATACATGGAATGGACCAACGTTCAAATATTGGCTGATTGGTGGC
GGTGGTTTTATCAGTTGGCTCGCCTACTATAGCTATCAGGCATATAAGAA
CAAATGCATTGATATAGAGTTGCCACCTCCATTACCAAACCATCTGTTAA
TCGACAGGAAAAAAGAATTTGAGAATTTGACAGACAAATATAATGCGCAA
GACACAATGTTTTCGACACAAAAAGTCAAGAAATTGTTGATTCATGGTCC
ATCTTGCAGTGGGAAAACAGTTTTTGCAAACCAATTTATTAAGCAtttaa
aactaaaacaaaaatcGACGCTTCAACTACCTGTTTCCAATGTGACATTG
TTCCTACAAACTGATACTGAAACCTCCTTTCTCATTTCTTTAAAATCTGC
AGCTGCAAAACTTGAAGTATCAAAAACTGATTTAGATGAGGGTATGCAAA
GTGGATCCTTTAGTGAGGGAACATTTAAAGAGCAGTGTAatgttttaatt
gaaaacatcCAAGATAAGTTATCCAAACACCCTGGATGGGTAATCATCTT
TGATCAATTACAATCAACCAGTCCAACCACTGTTCTTGAAATATTGAATA
GCTGTATCGAAGACGAAGAGAGCTGGAGCTCGGGTTTGTTCCTGGTTGTT
GCTGACGGTGTGGATCCGAAGACAGTTGCCATCAATAAGCAATCAGCCAT
TTCTCTGCAGAAAGGGTGAGGGTTGCttttgaaaatcaacttttgATTAA
AATGAACGGATAAACtgtttgataatttttaattttcaaccaTACACTTG
AATATATAGATCTTTGAACTGGAAAGCAGCTATCATTTAtaaaatgttat
gttatactttCAATTTTGTAACTTTTACATCGTATTAATTTGAATAAATG
CCTAAAAAAGGGTCTGTTTTATTCATAGTAATACGATATGTATATGCAAT
CTTTGTTGAATGATTTTATTATCAGACCtaattgttgttgttttctttaC
AGGATGTCTGTAGAAGATGGTGTTCAACTCTTGAAAAACTTTGTGAATGT
TGACGGGAATGTGGCATCATTGAGTTTACTGGTGGAGAAGGTGTTTGGCA
ATCCGTTGGCTTTACTTTGTAATGCAGTGCTGCTGAAAAAGAAACTAGCA
ATGAAGCAGGTTCAAAGTATTGATGACGCAGTGAAAGAAATTTGTgatga
aattgatgaaaatgtCAATCGAGTAATCTCGCAGAACCAACACCTCTCTG
CTTTCACTTCCACTTATTCAGGACGGAAACTTGTCACCATCGAATCTGTT
GTTGCCATTCTAATGAAAGATATCATAAAGGAAAGTCCTTATTTATACAA
TGGCATTGACCTGATGGCAGCAATGGCACCAGGGACTGCCATACCACAAC
AAGCCATTACTCGACATCTTGCATCTTCATTCTACAAACTACCATCACTT
GCAAAACCACCAAACATTTTGGATTTCATGAACAAACAGCAAAGAGATGC
GGACGACGTCAAGCAAAATGCTGATGAATTTGATCCCAAAGGAAAAGCAT
GGTCCAATAAAAACCTGGTGCACTACATACAGAAAGTGGAGGAGTTTTTT
GAGACGGTGTATAAGACGATGAAGGAAATTTATTTCTTGGTGTATGGTGT
GTTACCAGAGCTTCCAAAAGGTGATGATGGAATGGGAATGTTCTCAGAAT
GTGTTCTCATTCAATCAAGTGTCGTCCAACCAGGAGGTATGATCAATGTT
CTCTTTATGAAATTCTCTCTTCATTAATTCTGATAATGGTTTTCTATGGC
CCTCTCCAAAGTTGAAAAGTAGACCTGGTTAGATCGTAACTTCAGTATAC
ACTTGATTTATTCTTTGCTCAATATCATTTATACTGCATAAAAACCTAAT
TACCctaaaagccattttttctGAAATGGAATTTAAGGATGTACGATAAg
tcaagtttttttattgactgATCCTGACTGATCTGTTGTTCATGAAGGTT
CATAGTTGTGCACGGCAtcatttttagccaaatttcTGAGCTCATTGTAT
AATAATTTTAGATGGCGATTTTAGATGTATACCAAGAGAAGAGCTTAGTT
GCAAACAAAGTTGGTAAAACATGCTTCAGTTAATCAtttcttttgacttt
taatCTTTTCAAAACCTTTATGTTTCACAGATGTAAACACATTCAGTCTG
CACCCAATAGTGTACAACGTAGCACGACAACATTTCATGGCGAAAACCCT
GGTCGACATTGAAGAGAAGAATGTGCGCGAAAACAAAGATTTCCATCAAA
ACAAATCTTGGTATCGAAAATTGAGCGATTTCAACGAGCAAACGATACTC
CAACAATATCGTAATTCGGCTGGTCATGGTGAGATCAAAAAGATGTTATC
AGATGACGATGCCAACAGTTTATTGTTCCGATTCAATCTTGGTATTGATG
TCTCTTGTCTGTTCAAAGAGGATGAAAACACCAGCCAGGATGCTTGCTGG
GATGGAAAACCAGTGGAAAAAGTCGGTCTTCTCCAAGATCATTTGACCAG
GATCACAGATTCTCTTTGCGAACAGATGAATGTGACCAAGGGTGATCTCA
ATGGTCATACTGTCAAGAAAATATTGATGCTTCATTTAGAATACATTcta
aaaaatcaaccttttgAGTTATTGGGAGCCAGAAATCAAAGCAAGATTTT
ATTTGCATTAGCTAAAGCNATGAGTTGTTGGGAGCCAGAAATCAAAGCAA
GATTCTATTTGCATTAGCTAAAGCATACAAcagtgtttacaaagattttg
aTGCTTGTAAGGAACTGATTGATCAGGTTTTATCTATGCAGCAATCCCTA
CCAGATACTGATCCTTTGGACATTGCCAGAACTTTGGCAGAAAAAGCACA
GTACTTAATTAACAAGGAGGATTATGAAACTGCTAAAACTACTTTGTTGG
AAGCTTCTGATATCTATGAAGCACAAAGGAAGAAGTTTGGTGAATATAAG
TTTCCTATTGAGTATGGTAAATTGTTGGGAATGCTAGGTGCTGTTTATGG
CAGCTTGAGTATGAAGATTGAGAGCAAGGAGACAATCGAGCGCGCTCTGA
TGATGCAGCAATCAATCCCTCCTGATATGACGGATGaagagaaaagtaaa
aaatttggagCTGATTTCGCCAGCATATTGATCGACTTAGCACACGCCTA
TGTTTCTCTTGGACTACCTTTGTATGGTAAGAAAATAGTCGATCTTGCTT
TGACTGCTCAGAAGAACTTGAACGGTGAGGACCATCCAGAGGTTGTGAGA
GCTTTAACTGTCTTAGCAATGGCTCATTTGATGCAAGGCCATAATGAAGA
ATCTAAAAAACATCGCAAAGAAGCTGGTAAAATACAAGCTAACCTAAAAA
AGATGCCTCTTTATTAAGATTATAGCATTTATATATTCagtttttttatt
ctttgtcaatgaattttttacaatatttttttgagaaaatagtTTCTATC
GTTCATTACGTTGGGGAAGGGTCGCAAATCAGTTTTAGGTTAGCATTCTT
TTAACGTTCTTGCTAACGTAATCTTAAAATTAGAGCTTTTTTTCTCGATA
AAAACAAAGGTGAAGGTTAACTTACAATAGATTTGTGACACCTTTCCTAT
CTTTTCTATAAATTCATTCATCTTCCTTCCGGTATCTCACTCACATCACC
TAATGTTATCAATTCAGTCTGAAAGATTGTCTTTATGAATTTTCTTTCTG
ACCTTACTATTCCCTTCGAATTTCACATACTTTTTCTAATGGTATCTTTT
ATTTATCTTAGATAAGCATAAAAAAGTAATGATTGTTGAATGGCACGCAA
GAAGCTGGTGCTCATCTTCATCCTAGTCTCACTTACGTTTCTGGTGATCC
AGCTGTTATCTACCGATATCTTTTCCATCAGTAATAAACAGGCTCCCAAA
GCACAGGTGTCAAGTGGTATTAGTGATACAGACTTGAGATTCTCTGTGAG
TGAGCTTTTAACTGTTTGCAGAAACGTTGGTATTAAATGTGTTGTAGGAG
ACATTGATTGGTTGCAGACGTTTGCTGCGTCAAGACATAAAGACCACGAT
GAAGATTGCAAATATCTTTGTGCTGGCAATTTCATGTCCTTCTTGATCGA
AGGTGACTCTTTGAAAAATGGGAGATTCGAATACTTGATTCGAAAACTCG
TCAAAGTTGGATTCGAAGTTCGAAAAGACGCACGTCAAGACGAGCGTCAA
TTATCCCTTGAGAAACGAATGACGTCATCTATCCTTGTCTATCATCTTTA
TTTACGGAAAAACGACCATTTCTTTTTGATGACTTTTCAGTACGAACGGT
TGGGACTTTTGTGGAGCAATGCGTGCGATTTGAGTAAACTTCGtgatgaa
aaacaaaagaagatgGTTTCAACGTCTACATTTTGTTCTCAACGTCTGAT
ACCAACTTTCAAAACCTCTTCAGCTCGTATCGATGGATTGAATGTACACA
TCCCCAAAGCTATTTTCTCATTTATCGAGATTGTGAAAAACGGTATATAT
GTGCCTTGCCCTCTTCAACACGCTCGACAATTTTACTCCAAGTACGGCTA
CAGAAGTGACCCTATCAGTGAAAAGTTTCGAATCAAAGCTAAAAATTTAC
TAACAATAGCGATCGACGTTTTAGGGCAACTTAGGATACCATTTTGGTTG
TCAAGTGGAACTTGTTTAGGATGGTTTCGTCAATGTGACGTCATCCCACA
TAGCAAGGACGTTGATATTGGGATATGGATCAAACACTACAAGAAGGATC
TGATCAAAGCTTTCCTGGATAATGGTCTCAAACTGAAACACCAGTTCGGC
AAAGTGGAAGATAGTTTCGAATTATCTTTCACTTTGAATGATTTGAAGtt
agacatttttttcttttacaaggAAGAGGGAATTATGTGGAATGGTGGTA
CGCAAGCCAGaactggaaaaaaattcaaatatattttccccGAGTTCTCT
TTGTGTTGGTCACACTTACTGGACTTGACCGTTCGTGTGCCATGCCCAAC
TAAACCATACGTGCTAGCGAATTACGGTCACGATTGGGATAAACGTGTTG
AGAAATGGGATTGGAAAGCTAGTCCACCGAATGTGGAACCAAACGGCGAG
TGGCCTGCAGAAGAACGGAAACAAGTGATTCAAGTTTATTGAGATGGAGC
TCTTGGCGCTGTGAAATTTGTCATTTATCTTTGTCATATTTAATACTTCT
TCATATGttcgttttaattttcaactccTGGCTACGAAGCTCctaaattt
tcaatcttttcaagtaagggaactaattttcgcgggaactagtTTTTGCG
GGAACTAGTTTTTGTGGGAACTAGTTTTTGCGGGAACTAGTTTTTGCGGG
AACTAGTTTTTgtggaacttattttcgcggtgCGAGGGTACTAAATTAGC
GCTTTTTGTGCTACTAATTTTCACGGTTGACAACCTCTTTTTGTAGAAAt
cctttcatttttctttgggtatttgaagatttttagtaaaaattgcattt
cgaggaactaatttttgcggtagGTGAACATttagttcccgctaaaattt
gGTTTGCTGGAAATTTTTTGCAAATCTTCTCAGTACAAACCTTTTATTGG
ATTTCGAGGATAATTATTTTTAGATAGAATATATATTTtacagtttattt
atttttaaaagcattttttaaatagtttttgtACGTTCGAttgtaaaaat
gttgaaatgatCTG Coding sequence (CDS) from alignment at scaffold_309:576065..582078+ >TCONS_00058251 ID=TCONS_00058251|Name=TCONS_00058251|organism=Clytia hemisphaerica|type=CDS|length=6480bp|location=Sequence derived from alignment at scaffold_309:576065..582078+ (Clytia hemisphaerica)
atgttcagGCTAATAGCAAGTAAATCACTGCTGAGACCAAGATTATCACA
CATTTCAAGCAGATGTCAATCAGATAGCTCTTCAAGTGAACCACCTGTTG
TAGAAAAGACTTTTCGTGAAAAAGCACGAGATACATGGAATGGACCAACG
TTCAAATATTGGCTGATTGGTGGCGGTGGTTTTATCAGTTGGCTCGCCTA
CTATAGCTATCAGGCATATAAGAACAAATGCATTGATATAGAGTTGCCAC
CTCCATTACCAAACCATCTGTTAATCGACAGGAAAAAAGAATTTGAGAAT
TTGACAGACAAATATAATGCGCAAGACACAATGTTTTCGACACAAAAAGT
CAAGAAATTGTTGATTCATGGTCCATCTTGCAGTGGGAAAACAGTTTTTG
CAAACCAATTTATTAAGCAtttaaaactaaaacaaaaatcGACGCTTCAA
CTACCTGTTTCCAATGTGACATTGTTCCTACAAACTGATACTGAAACCTC
CTTTCTCATTTCTTTAAAATCTGCAGCTGCAAAACTTGAAGTATCAAAAA
CTGATTTAGATGAGGGTATGCAAAGTGGATCCTTTAGTGAGGGAACATTT
AAAGAGCAGTGTAatgttttaattgaaaacatcCAAGATAAGTTATCCAA
ACACCCTGGATGGGTAATCATCTTTGATCAATTACAATCAACCAGTCCAA
CCACTGTTCTTGAAATATTGAATAGCTGTATCGAAGACGAAGAGAGCTGG
AGCTCGGGTTTGTTCCTGGTTGTTGCTGACGGTGTGGATCCGAAGACAGT
TGCCATCAATAAGCAATCAGCCATTTCTCTGCAGAAAGGGATGTCTGTAG
AAGATGGTGTTCAACTCTTGAAAAACTTTGTGAATGTTGACGGGAATGTG
GCATCATTGAGTTTACTGGTGGAGAAGGTGTTTGGCAATCCGTTGGCTTT
ACTTTGTAATGCAGTGCTGCTGAAAAAGAAACTAGCAATGAAGCAGGTTC
AAAGTATTGATGACGCAGTGAAAGAAATTTGTgatgaaattgatgaaaat
gtCAATCGAGTAATCTCGCAGAACCAACACCTCTCTGCTTTCACTTCCAC
TTATTCAGGACGGAAACTTGTCACCATCGAATCTGTTGTTGCCATTCTAA
TGAAAGATATCATAAAGGAAAGTCCTTATTTATACAATGGCATTGACCTG
ATGGCAGCAATGGCACCAGGGACTGCCATACCACAACAAGCCATTACTCG
ACATCTTGCATCTTCATTCTACAAACTACCATCACTTGCAAAACCACCAA
ACATTTTGGATTTCATGAACAAACAGCAAAGAGATGCGGACGACGTCAAG
CAAAATGCTGATGAATTTGATCCCAAAGGAAAAGCATGGTCCAATAAAAA
CCTGGTGCACTACATACAGAAAGTGGAGGAGTTTTTTGAGACGGTGTATA
AGACGATGAAGGAAATTTATTTCTTGGTGTATGGTGTGTTACCAGAGCTT
CCAAAAGGTGATGATGGAATGGGAATGTTCTCAGAATGTGTTCTCATTCA
ATCAAGTGTCGTCCAACCAGGAGATGTAAACACATTCAGTCTGCACCCAA
TAGTGTACAACGTAGCACGACAACATTTCATGGCGAAAACCCTGGTCGAC
ATTGAAGAGAAGAATGTGCGCGAAAACAAAGATTTCCATCAAAACAAATC
TTGGTATCGAAAATTGAGCGATTTCAACGAGCAAACGATACTCCAACAAT
ATCGTAATTCGGCTGGTCATGGTGAGATCAAAAAGATGTTATCAGATGAC
GATGCCAACAGTTTATTGTTCCGATTCAATCTTGGTATTGATGTCTCTTG
TCTGTTCAAAGAGGATGAAAACACCAGCCAGGATGCTTGCTGGGATGGAA
AACCAGTGGAAAAAGTCGGTCTTCTCCAAGATCATTTGACCAGGATCACA
GATTCTCTTTGCGAACAGATGAATGTGACCAAGGGTGATCTCAATGGTCA
TACTGTCAAGAAAATATTGATGCTTCATTTAGAATACATTctaaaaaatc
aaccttttgAGTTATTGGGAGCCAGAAATCAAAGCAAGATTTTATTTGCA
TTAGCTAAAGCNATGAGTTGTTGGGAGCCAGAAATCAAAGCAAGATTCTA
TTTGCATTAGatgttcagGCTAATAGCAAGTAAATCACTGCTGAGACCAA
GATTATCACACATTTCAAGCAGATGTCAATCAGATAGCTCTTCAAGTGAA
CCACCTGTTGTAGAAAAGACTTTTCGTGAAAAAGCACGAGATACATGGAA
TGGACCAACGTTCAAATATTGGCTGATTGGTGGCGGTGGTTTTATCAGTT
GGCTCGCCTACTATAGCTATCAGGCATATAAGAACAAATGCATTGATATA
GAGTTGCCACCTCCATTACCAAACCATCTGTTAATCGACAGGAAAAAAGA
ATTTGAGAATTTGACAGACAAATATAATGCGCAAGACACAATGTTTTCGA
CACAAAAAGTCAAGAAATTGTTGATTCATGGTCCATCTTGCAGTGGGAAA
ACAGTTTTTGCAAACCAATTTATTAAGCAtttaaaactaaaacaaaaatc
GACGCTTCAACTACCTGTTTCCAATGTGACATTGTTCCTACAAACTGATA
CTGAAACCTCCTTTCTCATTTCTTTAAAATCTGCAGCTGCAAAACTTGAA
GTATCAAAAACTGATTTAGATGAGGGTATGCAAAGTGGATCCTTTAGTGA
GGGAACATTTAAAGAGCAGTGTAatgttttaattgaaaacatcCAAGATA
AGTTATCCAAACACCCTGGATGGGTAATCATCTTTGATCAATTACAATCA
ACCAGTCCAACCACTGTTCTTGAAATATTGAATAGCTGTATCGAAGACGA
AGAGAGCTGGAGCTCGGGTTTGTTCCTGGTTGTTGCTGACGGTGTGGATC
CGAAGACAGTTGCCATCAATAAGCAATCAGCCATTTCTCTGCAGAAAGGG
ATGTCTGTAGAAGATGGTGTTCAACTCTTGAAAAACTTTGTGAATGTTGA
CGGGAATGTGGCATCATTGAGTTTACTGGTGGAGAAGGTGTTTGGCAATC
CGTTGGCTTTACTTTGTAATGCAGTGCTGCTGAAAAAGAAACTAGCAATG
AAGCAGGTTCAAAGTATTGATGACGCAGTGAAAGAAATTTGTgatgaaat
tgatgaaaatgtCAATCGAGTAATCTCGCAGAACCAACACCTCTCTGCTT
TCACTTCCACTTATTCAGGACGGAAACTTGTCACCATCGAATCTGTTGTT
GCCATTCTAATGAAAGATATCATAAAGGAAAGTCCTTATTTATACAATGG
CATTGACCTGATGGCAGCAATGGCACCAGGGACTGCCATACCACAACAAG
CCATTACTCGACATCTTGCATCTTCATTCTACAAACTACCATCACTTGCA
AAACCACCAAACATTTTGGATTTCATGAACAAACAGCAAAGAGATGCGGA
CGACGTCAAGCAAAATGCTGATGAATTTGATCCCAAAGGAAAAGCATGGT
CCAATAAAAACCTGGTGCACTACATACAGAAAGTGGAGGAGTTTTTTGAG
ACGGTGTATAAGACGATGAAGGAAATTTATTTCTTGGTGTATGGTGTGTT
ACCAGAGCTTCCAAAAGGTGATGATGGAATGGGAATGTTCTCAGAATGTG
TTCTCATTCAATCAAGTGTCGTCCAACCAGGAGATGTAAACACATTCAGT
CTGCACCCAATAGTGTACAACGTAGCACGACAACATTTCATGGCGAAAAC
CCTGGTCGACATTGAAGAGAAGAATGTGCGCGAAAACAAAGATTTCCATC
AAAACAAATCTTGGTATCGAAAATTGAGCGATTTCAACGAGCAAACGATA
CTCCAACAATATCGTAATTCGGCTGGTCATGGTGAGATCAAAAAGATGTT
ATCAGATGACGATGCCAACAGTTTATTGTTCCGATTCAATCTTGGTATTG
ATGTCTCTTGTCTGTTCAAAGAGGATGAAAACACCAGCCAGGATGCTTGC
TGGGATGGAAAACCAGTGGAAAAAGTCGGTCTTCTCCAAGATCATTTGAC
CAGGATCACAGATTCTCTTTGCGAACAGATGAATGTGACCAAGGGTGATC
TCAATGGTCATACTGTCAAGAAAATATTGATGCTTCATTTAGAATACATT
ctaaaaaatcaaccttttgAGTTATTGGGAGCCAGAAATCAAAGCAAGAT
TTTATTTGCATTAGCTAAAGCNATGAGTTGTTGGGAGCCAGAAATCAAAG
CAAGATTCTATTTGCATTAGatgttcagGCTAATAGCAAGTAAATCACTG
CTGAGACCAAGATTATCACACATTTCAAGCAGATGTCAATCAGATAGCTC
TTCAAGTGAACCACCTGTTGTAGAAAAGACTTTTCGTGAAAAAGCACGAG
ATACATGGAATGGACCAACGTTCAAATATTGGCTGATTGGTGGCGGTGGT
TTTATCAGTTGGCTCGCCTACTATAGCTATCAGGCATATAAGAACAAATG
CATTGATATAGAGTTGCCACCTCCATTACCAAACCATCTGTTAATCGACA
GGAAAAAAGAATTTGAGAATTTGACAGACAAATATAATGCGCAAGACACA
ATGTTTTCGACACAAAAAGTCAAGAAATTGTTGATTCATGGTCCATCTTG
CAGTGGGAAAACAGTTTTTGCAAACCAATTTATTAAGCAtttaaaactaa
aacaaaaatcGACGCTTCAACTACCTGTTTCCAATGTGACATTGTTCCTA
CAAACTGATACTGAAACCTCCTTTCTCATTTCTTTAAAATCTGCAGCTGC
AAAACTTGAAGTATCAAAAACTGATTTAGATGAGGGTATGCAAAGTGGAT
CCTTTAGTGAGGGAACATTTAAAGAGCAGTGTAatgttttaattgaaaac
atcCAAGATAAGTTATCCAAACACCCTGGATGGGTAATCATCTTTGATCA
ATTACAATCAACCAGTCCAACCACTGTTCTTGAAATATTGAATAGCTGTA
TCGAAGACGAAGAGAGCTGGAGCTCGGGTTTGTTCCTGGTTGTTGCTGAC
GGTGTGGATCCGAAGACAGTTGCCATCAATAAGCAATCAGCCATTTCTCT
GCAGAAAGGGATGTCTGTAGAAGATGGTGTTCAACTCTTGAAAAACTTTG
TGAATGTTGACGGGAATGTGGCATCATTGAGTTTACTGGTGGAGAAGGTG
TTTGGCAATCCGTTGGCTTTACTTTGTAATGCAGTGCTGCTGAAAAAGAA
ACTAGCAATGAAGCAGGTTCAAAGTATTGATGACGCAGTGAAAGAAATTT
GTgatgaaattgatgaaaatgtCAATCGAGTAATCTCGCAGAACCAACAC
CTCTCTGCTTTCACTTCCACTTATTCAGGACGGAAACTTGTCACCATCGA
ATCTGTTGTTGCCATTCTAATGAAAGATATCATAAAGGAAAGTCCTTATT
TATACAATGGCATTGACCTGATGGCAGCAATGGCACCAGGGACTGCCATA
CCACAACAAGCCATTACTCGACATCTTGCATCTTCATTCTACAAACTACC
ATCACTTGCAAAACCACCAAACATTTTGGATTTCATGAACAAACAGCAAA
GAGATGCGGACGACGTCAAGCAAAATGCTGATGAATTTGATCCCAAAGGA
AAAGCATGGTCCAATAAAAACCTGGTGCACTACATACAGAAAGTGGAGGA
GTTTTTTGAGACGGTGTATAAGACGATGAAGGAAATTTATTTCTTGGTGT
ATGGTGTGTTACCAGAGCTTCCAAAAGGTGATGATGGAATGGGAATGTTC
TCAGAATGTGTTCTCATTCAATCAAGTGTCGTCCAACCAGGAGATGTAAA
CACATTCAGTCTGCACCCAATAGTGTACAACGTAGCACGACAACATTTCA
TGGCGAAAACCCTGGTCGACATTGAAGAGAAGAATGTGCGCGAAAACAAA
GATTTCCATCAAAACAAATCTTGGTATCGAAAATTGAGCGATTTCAACGA
GCAAACGATACTCCAACAATATCGTAATTCGGCTGGTCATGGTGAGATCA
AAAAGATGTTATCAGATGACGATGCCAACAGTTTATTGTTCCGATTCAAT
CTTGGTATTGATGTCTCTTGTCTGTTCAAAGAGGATGAAAACACCAGCCA
GGATGCTTGCTGGGATGGAAAACCAGTGGAAAAAGTCGGTCTTCTCCAAG
ATCATTTGACCAGGATCACAGATTCTCTTTGCGAACAGATGAATGTGACC
AAGGGTGATCTCAATGGTCATACTGTCAAGAAAATATTGATGCTTCATTT
AGAATACATTctaaaaaatcaaccttttgAGTTATTGGGAGCCAGAAATC
AAAGCAAGATTTTATTTGCATTAGCTAAAGCNATGAGTTGTTGGGAGCCA
GAAATCAAAGCAAGATTCTATTTGCATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058251-exon-scaffold_309-1491911889:576065..577029 | TCONS_00058251-exon-scaffold_309-1491911889:576065..577029 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1510915933:576065..577029 | TCONS_00058251-exon-scaffold_309-1510915933:576065..577029 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1575043694:576065..577029 | TCONS_00058251-exon-scaffold_309-1575043694:576065..577029 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1491911889:577317..578050 | TCONS_00058251-exon-scaffold_309-1491911889:577317..578050 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1510915933:577317..578050 | TCONS_00058251-exon-scaffold_309-1510915933:577317..578050 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1575043694:577317..578050 | TCONS_00058251-exon-scaffold_309-1575043694:577317..578050 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1491911889:578495..579690 | TCONS_00058251-exon-scaffold_309-1491911889:578495..579690 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1510915933:578495..579690 | TCONS_00058251-exon-scaffold_309-1510915933:578495..579690 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1575043694:578495..579690 | TCONS_00058251-exon-scaffold_309-1575043694:578495..579690 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1491911889:580126..582078 | TCONS_00058251-exon-scaffold_309-1491911889:580126..582078 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1510915933:580126..582078 | TCONS_00058251-exon-scaffold_309-1510915933:580126..582078 | Clytia hemisphaerica | exon |
| TCONS_00058251-exon-scaffold_309-1575043694:580126..582078 | TCONS_00058251-exon-scaffold_309-1575043694:580126..582078 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:576065..582078 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
BLAST of TCONS_00058251 vs. Swiss-Prot (Human)
Match: FKTN (Fukutin OS=Homo sapiens GN=FKTN PE=1 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 4.661e-88 Identity = 178/467 (38.12%), Postives = 255/467 (54.60%), Query Frame = 2
Query: 2924 MARKKLVLIFILVSLT---FLVIQLLSTDIFSISNKQAPKAQVSSGIS---DTDLRFSVSELLTVCRNVGIKCVVGDIDWLQ----TFAASRHKDHDE--DCKYLCAG-NFMSFLIEGDSLKNGRFEYLIRKLVKVGFEVRKDARQDERQLSLEKRMTSSILVYHLYLRKNDHFFLMTFQYERLGLLWSNACDLSKLRDEKQKKMVSTSTFCSQRLIPTF---KTSSARIDGLNVHIPKAIFSFIEIVKNGIYVPCPLQHARQFYSKYGYRSDPISEKFRIKAKNLLTIAIDVLGQLRIPFWLSSGTCLGWFRQCDVIPHSKDVDIGIWIKHYKKDLIKAFLDNGLKLKHQFGKVEDSFELSFT-LNDLKLDIFFFYKEEGIMWNGGTQARTGKKFKYIFPEFSLCWSHLLDLTVRVPCPTKPYVLANYGHDWDKRVEKWDWKASPPNVEPNGEWPAEERKQVIQVY 4273
M+R ++ L++LT FL+ QL + +S K S G D+ +V + + + N + + D L+ F ++ H CK+ C +F +F ++ KN E R +GF+ K +D R ++ + I ++++ L+ F LW +L++ +K V R F + +DGL V IPK F+E V + ++ C + AR F+ +Y + + FR AK LL +A L +L +PFWLSSGTCLGW+RQC++IP+SKDVD+GI+I+ YK D+I AF D GL LKH+FGKVEDS ELSF +D+KLD+FFFY+E MWNGGTQA+TGKKFKY+FP+F+LCW+ +D+ V VPC T Y+ ANYG W V+ WDWK SPPNV+PNG WP E +VIQ+Y
Sbjct: 1 MSRINKNVVLALLTLTSSAFLLFQLYYYKHY-LSTKNGAGLSKSKGSRIGFDSTQWRAVKKFIMLTSNQNVPVFLIDPLILELINKNFEQVKNTSHGSTSQCKFFCVPRDFTAFALQYHLWKNE--EGWFRIAENMGFQCLKIESKDPRLDGIDSLSGTEIPLHYICKLATHAIHLVVFHERSGNYLWHGHL---RLKEHIDRKFVPFRKLQFGRYPGAFDRPELQQVTVDGLEVLIPKDPMHFVEEVPHSRFIECRYKEARAFFQQYLDDNTVEAVAFRKSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQDYKSDIILAFQDAGLPLKHKFGKVEDSLELSFQGKDDVKLDVFFFYEETDHMWNGGTQAKTGKKFKYLFPKFTLCWTEFVDMKVHVPCETLEYIEANYGKTWKIPVKTWDWKRSPPNVQPNGIWPISEWDEVIQLY 461
The following BLAST results are available for this feature:
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