|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057466 ID=TCONS_00057466|Name=TCONS_00057466|organism=Clytia hemisphaerica|type=transcript|length=595bp
TAAGTGATGAAAAGAAACAAACATGGAAAAGTAACATTTGACATGGAATG
AACTTCTCTAAAATGGATATTTCTGGTAAGAATTTCTTTGCCATGGATAA
ACGCCCACAACCTATTCCCAAGTTGTTTCCCCCTTGCctttataatatta
ttttcattttagactAAATAATAAAATGTCTGAAATAAGAGATGTTTCTA
AGATGGAGCCTTCCTATGCTAAAAAATACATGGAAGCAATGTATCGAGTA
AAAATCCCCTTTCCAGAGAGAAAACATGTTGTTGCAAGTAAATTAGCTGG
TGGGTTCATGGTCTTTTGGATGTTATGGCGTGCTAAACATGACTGGCACT
CTCTTTTTACTCATTTTCATCAAGAAGATGTATGGAAGATTCCCTCCCCG
AAAACATCCAAGTTACCATTAGAAGAAGAATgaatattttattgaaatat
tttgtcaaatattttttagattttctgcTTGTAAATAAATGAAATCAACG
TGTTTGCTTGATGTTTCTTCTCAACAAATATACTTTTTGAGGCCAGCATT
CAGTCTTAAGATTCTCCAtaataaattttcattgaaaggTTTGAG Run BLAST on NCBI transcript from alignment at scaffold_289:442454..443243+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057466 ID=TCONS_00057466|Name=TCONS_00057466|organism=Clytia hemisphaerica|type=transcript|length=790bp|location=Sequence derived from alignment at scaffold_289:442454..443243+ (Clytia hemisphaerica)
TAAGTGATGAAAAGAAACAAACATGGAAAAGTAACATTTGACATGGAATG
AACTTCTCTAAAATGGATATTTCTGGTAAGAATTTCTTTGCCATGGATAA
ACGCCCACAACCTATTCCCAAGTTGTTTCCCCCTTGCctttataatatta
ttttcattttagactAAATAATAAAATGTCTGAAATAAGAGATGTTTCTA
AGATGGAGCCTTCCTATGCTAAAAAATACATGGAAGCAATGTATCGAGTA
AAAATCCCCTTTCCAGAGAGAAAACATGTTGTTGCAAGTAAATTAGCTGG
TGGGTTCATGGTCTTTTGGATGTTATGGCGTGCTAAACATGACTGGCACT
CTCTTTTTGTAtgtatatttcaaatttttatcatatgcaaaaagattttt
atattAAATGAATTTGACTGAAGATTGCCACAGTGTAATCAAGATCTTTG
TATAAAATCCAATGTTGACCAACTCTATAGTCGTTTTTAGGAGAACGCAA
TGGTCTATATTGCATAACTAATTACTAATACTAAAACATAAATTCGTTTT
CAGACTCATTTTCATCAAGAAGATGTATGGAAGATTCCCTCCCCGAAAAC
ATCCAAGTTACCATTAGAAGAAGAATgaatattttattgaaatattttgt
caaatattttttagattttctgcTTGTAAATAAATGAAATCAACGTGTTT
GCTTGATGTTTCTTCTCAACAAATATACTTTTTGAGGCCAGCATTCAGTC
TTAAGATTCTCCAtaataaattttcattgaaaggTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057466-exon-scaffold_289-1491911889:442454..442811 | TCONS_00057466-exon-scaffold_289-1491911889:442454..442811 | Clytia hemisphaerica | exon |
| TCONS_00057466-exon-scaffold_289-1510915933:442454..442811 | TCONS_00057466-exon-scaffold_289-1510915933:442454..442811 | Clytia hemisphaerica | exon |
| TCONS_00057466-exon-scaffold_289-1575043694:442454..442811 | TCONS_00057466-exon-scaffold_289-1575043694:442454..442811 | Clytia hemisphaerica | exon |
| TCONS_00057466-exon-scaffold_289-1491911889:443007..443243 | TCONS_00057466-exon-scaffold_289-1491911889:443007..443243 | Clytia hemisphaerica | exon |
| TCONS_00057466-exon-scaffold_289-1510915933:443007..443243 | TCONS_00057466-exon-scaffold_289-1510915933:443007..443243 | Clytia hemisphaerica | exon |
| TCONS_00057466-exon-scaffold_289-1575043694:443007..443243 | TCONS_00057466-exon-scaffold_289-1575043694:443007..443243 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_289 | supercontig | scaffold_289:442454..443243 + |
Blast
The following BLAST results are available for this feature:
|
