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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057303 ID=TCONS_00057303|Name=TCONS_00057303|organism=Clytia hemisphaerica|type=transcript|length=1416bp
ATTCGATGATGCTGAAAAATAGACGCAAATTCCTTGATTGAACACGAACT
TGATTTTTCGGGAGAATGTTCTATCAGAAGAAGCTGAATTGCTCGTCAAG
AAAATGAACTACAGTACATAAATATTTCAATGATATAAAGCTGGTATATT
TTATATAATAAAGAACGATGTAATGGACGAATAATCATAAATACTTTGAT
ATATCTATTTATACTCCCAACGTACCGAAATATATTTTTGGTCAAACATA
TGAAAAGCAAATGCAACAGTAAATCATCTTTTAAATTTCCTGATGTTCAG
ATAAGGTAAAATTCACGCCGTTTTCTATTTTATCAATGTTCCAGGGAACG
TTTAgaggggggttgtacttttacggtgtgacgggattggccctttttta
gtacggtatttcgggatttgacgaaaaaagagacgggaaaacggtatttt
aaaatcagacggtgacggtatttaggtacatttttgccctgtacaagccg
gtgttattattttttcaattttcgggattccgggattcagcaaaaatttt
gacgaaaaaaggtatttcgaacccctacaaccccccccccctttagaGTA
ATTGGCAATAGGGTCTAGTCATTGTTCCGAGGGCTTTTCCGATTTGATAA
ATCCCTGGCGTACTAACAAGGGTCTGTAAATGATCtaagtcaaaaaaata
ttaaaagatatctttcatCACAACAGAAAATAAAAGTACACTACTCAGAG
TGTtaataaaaagggaatttaaaaTTGTAGCAATCAGGAAACTTAAAACT
TAGATTTATGGATGgatttttctttgataaaaTTACTCAAATACCACTGT
AGTTAATtctttcttgtgttttattgatttttatcatttttccatcgcta
tttaaaattttttcttctgGAATACTTTTTTGACTGTAATTCTGAATTCT
TACAGCCACGTATTCTGTGAATTTGCTGTCCAATCAATGgggaaaagaac
attttaaatatatatacaccaaattattttttttcctatATTTTGCGTCC
CGTGTGCAAcatttttctctgaaatttataaattgtcagcaaaaattttt
taatttaccaaaaaaaaattctttttctcattttcctaggaattttttta
tttaaaaattgttttataaatattattattatatgtAGAAATCCttatga
aaattttataatattttattaacatattttgttttgttttttcttttccc
cGTACGTTTTGTCTGGTTTTTCCATTtcggaattttcaaaaaaccttttc
CGTTGTTGATTTATTTTAGTGGGGCCCATACATTCGGTGAATTAGGTGAT
TTTTTCGTTAGTTTTTGATATATACTTTTTGACTTGCTGGTCAAAATAAG
TCAAAGAAGATTCCTT Run BLAST on NCBI transcript from alignment at scaffold_286:508277..509692 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057303 ID=TCONS_00057303|Name=TCONS_00057303|organism=Clytia hemisphaerica|type=transcript|length=1416bp|location=Sequence derived from alignment at scaffold_286:508277..509692 (Clytia hemisphaerica)
AAGGAATCTTCTTTGACTTATTTTGACCAGCAAGTCAAAAAGTATATATC
AAAAACTAACGAAAAAATCACCTAATTCACCGAATGTATGGGCCCCACTA
AAATAAATCAACAACGgaaaaggttttttgaaaattccgaAATGGAAAAA
CCAGACAAAACGTACggggaaaagaaaaaacaaaacaaaatatgttaata
aaatattataaaattttcataaGGATTTCTacatataataataatattta
taaaacaatttttaaataaaaaaattcctaggaaaatgagaaaaagaatt
tttttttggtaaattaaaaaatttttgctgacaatttataaatttcagag
aaaaatgTTGCACACGGGACGCAAAATataggaaaaaaaataatttggtg
tatatatatttaaaatgttcttttcccCATTGATTGGACAGCAAATTCAC
AGAATACGTGGCTGTAAGAATTCAGAATTACAGTCAAAAAAGTATTCcag
aagaaaaaattttaaatagcgatggaaaaatgataaaaatcaataaaaca
caagaaagaATTAACTACAGTGGTATTTGAGTAAttttatcaaagaaaaa
tcCATCCATAAATCTAAGTTTTAAGTTTCCTGATTGCTACAAttttaaat
tccctttttattaACACTCTGAGTAGTGTACTTTTATTTTCTGTTGTGat
gaaagatatcttttaatatttttttgacttaGATCATTTACAGACCCTTG
TTAGTACGCCAGGGATTTATCAAATCGGAAAAGCCCTCGGAACAATGACT
AGACCCTATTGCCAATTACtctaaagggggggggggttgtaggggttcga
aataccttttttcgtcaaaatttttgctgaatcccggaatcccgaaaatt
gaaaaaataataacaccggcttgtacagggcaaaaatgtacctaaatacc
gtcaccgtctgattttaaaataccgttttcccgtctcttttttcgtcaaa
tcccgaaataccgtactaaaaaagggccaatcccgtcacaccgtaaaagt
acaacccccctcTAAACGTTCCCTGGAACATTGATAAAATAGAAAACGGC
GTGAATTTTACCTTATCTGAACATCAGGAAATTTAAAAGATGATTTACTG
TTGCATTTGCTTTTCATATGTTTGACCAAAAATATATTTCGGTACGTTGG
GAGTATAAATAGATATATCAAAGTATTTATGATTATTCGTCCATTACATC
GTTCTTTATTATATAAAATATACCAGCTTTATATCATTGAAATATTTATG
TACTGTAGTTCATTTTCTTGACGAGCAATTCAGCTTCTTCTGATAGAACA
TTCTCCCGAAAAATCAAGTTCGTGTTCAATCAAGGAATTTGCGTCTATTT
TTCAGCATCATCGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057303-exon-scaffold_286-1491911889:508277..509692 | TCONS_00057303-exon-scaffold_286-1491911889:508277..509692 | Clytia hemisphaerica | exon |
| TCONS_00057303-exon-scaffold_286-1510915933:508277..509692 | TCONS_00057303-exon-scaffold_286-1510915933:508277..509692 | Clytia hemisphaerica | exon |
| TCONS_00057303-exon-scaffold_286-1575043694:508277..509692 | TCONS_00057303-exon-scaffold_286-1575043694:508277..509692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_286 | supercontig | scaffold_286:508277..509692 . |
Blast
The following BLAST results are available for this feature:
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