TCONS_00057016 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057016
Unique NameTCONS_00057016
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057016 ID=TCONS_00057016|Name=TCONS_00057016|organism=Clytia hemisphaerica|type=transcript|length=153bp
tgagaatgtaaatcaatctgctcaagcagacaaggtttatattttgGCTG
TGTACGAAATATCGGACAATAGTTTTTCTATCGACTTCTTTGTCGAGAGT
GTAAATAATCAATCTGCTCaacaagcagacaaggtttgtTTTATCGACCT
CTT
Run BLAST on NCBI

transcript from alignment at scaffold_284:542726..542878

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057016 ID=TCONS_00057016|Name=TCONS_00057016|organism=Clytia hemisphaerica|type=transcript|length=153bp|location=Sequence derived from alignment at scaffold_284:542726..542878 (Clytia hemisphaerica)
AAGAGGTCGATAAAacaaaccttgtctgcttgttGAGCAGATTGATTATT
TACACTCTCGACAAAGAAGTCGATAGAAAAACTATTGTCCGATATTTCGT
ACACAGCcaaaatataaaccttgtctgcttgagcagattgatttacattc
tca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035911XLOC_035911Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057016-exon-scaffold_284-1491911889:542726..542878TCONS_00057016-exon-scaffold_284-1491911889:542726..542878Clytia hemisphaericaexon
TCONS_00057016-exon-scaffold_284-1510915933:542726..542878TCONS_00057016-exon-scaffold_284-1510915933:542726..542878Clytia hemisphaericaexon
TCONS_00057016-exon-scaffold_284-1575043694:542726..542878TCONS_00057016-exon-scaffold_284-1575043694:542726..542878Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:542726..542878 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057016 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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