TCONS_00005631 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005631
Unique NameTCONS_00005631
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1264

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005631 ID=TCONS_00005631|Name=TCONS_00005631|organism=Clytia hemisphaerica|type=transcript|length=1264bp
ACAAAAGCGAGTTTAGGCCGCCCGTCTAGAGAGCGTGAGCCCTGATATTT
TTGTCTCGCGATTGATATTCTTCGAAGGAAGAATTAGCCAAAAAAACCCA
TTGACAAAAAGACGTCTTGCGAGACTGGGAATGGAtcctgcgaagatgaa
aaaattttaacaaggcATTTTTTGGCAAACCCATgaactctaattttttt
cttccatcaagctaaaaaatttggtttggttaatcgaggcaaaaattagc
aaaaagctggtgttttccgtaaatctgagaatcatgataagatcctcact
gtcaaatcaaaaaagtgaacaaacaagcttcgtaagaaaaaacactttaa
ctaccattcataaaaatacttgtccaaaatGACGAGTATGTTAGAAAGTA
TTTCCATAAAAATTAGCGTGATACAGTTTCCTTCctctgaaatattgata
aaaaagttgatgcaatcagttttgaaattagtcgtataagaaaataagaa
aagaagaagactctacattgcgatcaaaacatttgaGACACAGGGAAGAA
AGAAGACCttacattgcgatcaaaacatcCGATGGACAAAGTTTCTAGCT
CAGGTGCTACTAACATCATGGCTGGGTTAGTCAAACCAGATTCTATTTCA
ACTCTTGGATTCgCAAATGCAAGTGCTTCCAAGTTGATGATGATAGCAAC
TGGGATAGGATCAGTTAGCGTATATTTCTTGCCAACCAAATATTATCAGA
GGTTGACGTTAAATCTAACAGATATTATCAATCAGGGACAGGTTTTGCAA
CTGTTGAGCTCACAATTCATGGGAGAATATTTGTTGACAGATACAGTATC
AACTTTGTTTCTGATCTATCACTTCCGTATACTGGAACGAAGATGGGGTA
CTTCTAAATTTATGTCACACCTTCTATCTAGCTGGTCGCTGTCACTATCA
CTTTACTATGCTATTTACAAAAGCAGATTACTTGAACACACTGGGCTGGA
TTTACAAAATGTCCCTTCTGGACTATATGGCCCATTATTTGCAACCTTCG
TTCACTTTCTATTGGACATTCCACCTTCATCGGATGCACGAGCAACAAAC
ACAAACAGATTGTCCCTTCCCACTGGCAACACCTGGCTTGTCTGCCTGAT
CATGTTAAAGATGCTGATTTCACTTGATAGTCCGAAGGTACCACTCCTAT
CGCTATGTGGAATTGTAGCTGGCATACTGCAAAGATCCAATTTCCTTGGT
GTTCAAAGTTGGNN
Run BLAST on NCBI

protein sequence of TCONS_00005631-protein

>TCONS_00005631-protein ID=TCONS_00005631-protein|Name=TCONS_00005631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
MDKVSSSGATNIMAGLVKPDSISTLGFANASASKLMMIATGIGSVSVYFL
PTKYYQRLTLNLTDIINQGQVLQLLSSQFMGEYLLTDTVSTLFLIYHFRI
LERRWGTSKFMSHLLSSWSLSLSLYYAIYKSRLLEHTGLDLQNVPSGLYG
PLFATFVHFLLDIPPSSDARATNTNRLSLPTGNTWLVCLIMLKMLISLDS
PKVPLLSLCGIVAGILQRSNFLGVQSW
Run BLAST on NCBI

transcript from alignment at sc0000054:255252..262151-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005631 ID=TCONS_00005631|Name=TCONS_00005631|organism=Clytia hemisphaerica|type=transcript|length=6900bp|location=Sequence derived from alignment at sc0000054:255252..262151- (Clytia hemisphaerica)
ACAAAAGCGAGTTTAGGCCGCCCGTCTAGAGAGCGTGAGCCCTGATATTT
TTGTCTCGCGATTGATATTCTTCGAAGGAAGAATTAGCCAAAAAAACCCA
TTGACAAAAAGACGTCTTGCGAGACTGGGAATGGATCCTGCGAAGATGAA
AAAATTTTAACAAGGCATTTTTTGGCAAACCCATGAACTCTAATTTTTTT
CTTCCATCAAGCTAAAAAATTTGGTTTGGTTAATCGAGGCAAAAATTAGC
AAAAAGCTGGTGTTTTCCGTAAATCTGAGAATCATGATAAGATCCTCACT
GTCAAATCAAAAAAGTGAACAAACAAGCTTCGTAAGAAAAAACACTTTAA
CTACCATTCATAAAAATACTTGTCCAAAATGACGAGTATGTTAGAAAGTA
TTTCCATAAAAATTAGCGTGATACAGTTTCCTTCCTCTGAAATATTGATA
AAAAAGTTGATGCAATCAGTTTTGAAATTAGTCGTATAAGAAAATAAGAA
AAGAAGAAGACTCTACATTGCGATCAAAACATTTGAGACACAGGGAAGAA
AGAAGACCTTACATTGCGATCAAAACATCCGATGGACAAAGTTTCTAGCT
CAGGTTTGAAATAACAAAGTAAACCAGTATATTGAATCTCCGGATGGATA
TAAAAAGTTCCCGTATTTTTCTCAACTGAAGACCACTCCATAGACGACAA
CTTTCAAAACAAAACATAAACAAACTTTAGAAAAAAAGGGGAAGAAAAGA
AAATTCCTGAAAAAACATGCTGTAGGGAAAAACTAAATCATGAAATGGCT
AACATCCTGGTAAACTAAGTAGAATTATAGAATTATAAAAAAGGGGGATT
TTTGTTTATCAGTTGATATGTTGTTTTATTTTTTTTACTGTTATTTTCTA
GGTGCTACTAACATCATGGCTGGGTTAGTCAAACCAGATTCTATTTCAAC
TCTTGGATTCGGTATGGATTTTTTTCATTTCAATAAGATTTGATAATTTT
TTGGACCTACCTCAGAGGTTCTTTAAGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTTTGTCTTGAAAAATATCGAACAGGACTGGTAAAGAGA
AAAACCTTCACAATTTATGCCAAAATGTAATGACCTAACTGGATTGACTT
TTTTTGAATTGTTTTAAATACACAGGTTGCAAAAATAAAGTTTGAAGTTA
AATCATGCTTTTACTCGAATTTTCATGTGCTTATTACATGACCTTCATTT
CTGATTGGTTCGAATTCATTAATACGAATAAAGTAATTAAATGTGAGTTG
TATACCAAGTAACATGGGAATACAATTACATGAACATTTTCGATTAATCA
CATGTTTTGGCTGCACAATTCTATAATTTTGCAACCCGTGTGTTGCTTTG
AGAATTGATACTGATACTGATGTAAACAAGAAATTCCTAATTCCTAACTT
TTAAGTTATTCCAAACTTTTATTTAAAAAGATGATTATTTATATAAGGAT
ACGTTCCAGTTTTTTGGGATAATCTGATTATAAACTTATGTTAGGGCTTT
ATTTTTCAGTTTGAATATCTAACGATGAAAAGTTATTTTTAGCAAATGCA
AGTGCTTCCAAGTTGATGATGATAGCAACTGGGATAGGATCAGTTAGCGT
ATATTTCTTGCCAACCAAATATTATCAGAGGTTGACGTTAAATCTAACAG
ATATTATCAATCAGGGACAGGTGAGTTTTCATTTCTAAAATCTTTGAATA
GCTTTACAGAGGCCCCGGTGCTTGATAGCTTCTTTCTGTCGTTTTTGACA
AAATACACTCAATCATTTTTTCAGGATGGGATTTTTTAAGAATTCTGTGA
CTAGCGAGGTTAAGCAAGAAGCTATCTATTACGTGCGGAATCTATTACGT
GAGTTTTTAGACTGGATCCGAGGTGTTTTAGCCTGATTCCTAAAGCTTCA
CGGCATAGAGAAAAAAGAGGTTAAGCAAAAAAGGCGATCTATTACGTATG
ACGTAATGTCGATTTTTCCGTATTTCACTTTCGGCCCCTACTTCTGAAAT
TTTCTACCTCTTTTTTTCTTTTCCAGTTTTCTTGTTGGGGGTTTGGTCTA
TAAATTCCCCTTACTTTCAATTTTAATCTTAGTTTTTTCCCAAGACAAAT
GTTTTTCACAAAAATTAAATCTAGACAAGCATAGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGGGGGGGGGGGCGTTTATTTGGAACCTAAGAGTACGCGGCCCAAGGCC
CTGCATAGATTTAAAAACTTCAGTGATGAGGGGTTTAAGATTTCGTGCAT
GAATATCTACAGAGTTGCAATCAGTTAATAAAGTACCATAGTTCGAGATT
GATTTATTTTTCAGAGCACAAAGTGCTCTGTGATGGCATTTCTCAATCAG
GCTATTTTCCCCTTTCCACAGAACATCCAAACAAGTGGGCAATAATTAAA
GGGATAAAAAAATATAAGAGTTAACGAGAAGCTTTGCTTTGTCTTCCGAT
GAGAAATTTCTTACCCCTCTTAATGCCCGGAGTTTTTGGTTTGATTTCTT
ACATAACTCGGTGATATGAGGAATGAATGACAGTCTGCTGTCAATTTTTA
TGCCCAAAAGCTTAACAACATCAATGCTTTTGATGTTATTTTTAATTCTA
TCGGAAGAAAGAAAAAAGAAAGAAGAAAGATTTAGGTTGAAAGTGCCAGG
ATATATGAGTTGAAACTTTGCTTAAAACCAATCAAGAACTATGCGTAGTT
GACGCAAAAGTTTTAAATTCACATCGTCTATGCTGGGGCCAGACGATTAT
AAAGTATTATCATCTGCAAAATTTGATATTTCTTTTATAATATAAAATAA
TAAATTCTCGGCTAATTTTTCTTAGGAGTGGTATACACAGAGACAAAAAT
GTCAGTGTAGGACTTATTTAGTTATTTATTGTCATATGATTGAAATCCCA
CCTTGAACATGGCCATTTGGAAAGTCTGCTTTTTGAGAGTCTGAAAGGAC
TATTTACTAGGGGGTGATTTTTTTTCTGAAAGACAGATGATTGATATCCA
CAACCTAAAAACACGGCTTTATTAGGCACCTCCCTAAAAGTACTTAAAAT
TCGCATTAAATTCCTAAGAAATAATTAGAAAGATGTAGCCTTAAGGATTT
AACATTCTAACAGTCAGGTCAGGTTAAAAGATTTTTCCTACTCTCAAATT
TTTAGAACAGTTTTTGTTTAGTACATAATACTTGAAGGGATATTGTTTTA
AATTCTCTTTAGGTTTTGCAACTGTTGAGCTCACAATTCATGGGAGAATA
TTTGTTGACAGATACAGTATCAACTTTGTTTCTGATCTATCACTTCCGTA
TACTGGAACGAAGATGGGGTACTTCTAAATTTATGGTAATTAATTTTGTA
TTTTATCTCTCACTTATCATGTTATTTATATGTCATAATTTGACGTAAAT
ACAGGAACATGTTTTGATAACTTAAACCAGACCACAGGGTTTGTGTGGAT
AATATTTTGCTGCTCTTCAAAACTTATTTTTCTTTTGTGTATTTAGTCAC
ACCTTCTATCTAGCTGGTCGCTGTCACTATCACTTTACTATGCTATTTAC
AAAAGCAGATTACTTGAACACACTGGGCTGGATTTACAAAATGTCCCTTC
TGGACTGTATCTTTTTCGTTCATTAGTTTTTGAAATTATCTTTAATAAAA
ATTTCAATCCATTTTTGACGATTGGATAAATCTTTCAAAAGCTATCCAGT
AGCAAGTTTACACGTTTTTTTATGAGAACATCATTTTAGTTTTTTAATGG
AAGATAAGTTTTAAAATATCGATATAAAAACATCCAAATTTTTGAATTGG
GTGTTCTTAACTTTTTTTGTTTTAAGCCTAAAAATGTTCTTAACATATTT
TCATTTTTTGAGCGTTTTTGTCAATTTCCCTAAGAAATTGGGTGTTTTAG
AGTCTGCAAAGTCTTGCAATGTTCTTAGCTTGTTCTTAACTTTTTGATCA
TCGAAGCCTTATGTTCTTATATATTTTATTCTTATTAAAAAAACGTGTAT
CTGTGTTATGCTGCGACGGAGACAGTAAGCCTCTGATATTTCTAAATCAA
TCTAAATTGACTGAGGACGACAGTTAATATGCACTTTTACTGTCTTCGAT
TTTGCAGGTCAAAATTGCAAGTTATTCCAAAACGCTTCAGTTACTCCGCC
GTAGTCAAAAATGCTAATACATAAAAATTTGCTAGTATTTTTGAAAGAGG
CTTGTCAAGAAACGCAGAGATTTGATGTTCACCATTAAGTACGTTATTAG
AGTCGCTAGACATTAAAAACTCGACCGTGCTAAGTGTTATTTTCCTACAT
GTCCACCCTTATTTCATTCACGAACTAATAATTCATCCAAAAACCCTTTC
ACATATTTTACCTTAATCAAATAAGTAACATACATGAAAACAGATATGGC
CCATTATTTGCAACCTTCGTTCACTTTCTATTGGACATTCCACCTTCATC
GGATGCACGAGCAACAAACACAAACAGATTGTCCCTTCCCACTGGCAACA
CCTGGCTTGTCTGCCTGATCATGTTAAAGGTAATCTTTATAATGATTATT
TTGGTAGAGGTTTTTACAGTGGCTTTATTGATGCCTTGAAAAGGGAGTCT
GGAAACATTTTAAAGCAAATCCAAATTGATTATTTCTTGTCATTGAAGCT
TTCCGTCTAATCAATTTAAAAAAGATCAAGTGATATTTAGAGATGTCTTA
TTATTACATTGTCAACCAAACTATAATTATAATTATATATAATCTACTGA
TTTTGTTTTGGTTGTATACTATGTTGTTGCATTTAGATGCTGATTTCACT
TGATAGTCCGAAGGTACCACTCCTATCGCTATGTGGAATTGTAAGTTGCC
CTCTTTTTGGATAAAATGGAAATACAGGACCCGTTTCATTCTAAACCGAA
TCCTTTTTAAGTCTCGTTTGATAGATTAGTAATAGTAATAATATGACATT
TTTCACGAAATGCCATATCATTCCTGGTTAATTATATGACTGATTTTGTT
ATTTTTTAAAGAGCTATCCGAAATGGGGTTTCCAGAAGTAAGACAAAAAA
TTTATGATAAAACCAATATTAAGCAGATATTCGGTAAGAAAAATCGGATA
TCGAAAATTATTCAGTCGAGCTTCGCTTCGTCGAATACCATTAAAGCGAG
ACTGAATAATTTCGATATCCGATTTTTCACGTTGAATATATGGTTTATCG
TTCTCCAACTAGCAGAAATGTATTTTACTTTTTTGTCCCATTATTATTTT
GTCATTCACAGTCTTTCTCTCTTTTTATAACATTTTCGAACGTTTTACTA
TCTTATGTCAATTTCATTGTTTTTTTCTCTTTAATTACAAAACGTTCGAG
TTTCCTTTCTCTTTTGTTAAAAAGAACTTTCTTATATCTGTTTTATTTAT
GTGACATTTAAATAATTATTTGATCAAAAAACTATTTTCTTTATACTCGC
TGCTACAGAAGAGATATTTTGCTATCGGATATCTAAAAATATTTGACAGT
GCGTTTTGCAGTGCGAGGTGGACGATAATCCAAAATAATCCACAATACAA
ACATTCAAACAATATTATTGGGAGGAAGATTCTTCATAAAAATTGTATTT
TCGGCTCCTTTGCAAAGACGCCTGCATTATCATCAGCGAGTCAGGTTTAT
AATAATCATAGTGCTATATTCTTCTTTTGTATCTCCATTCAAAATGGTCG
CAAATGAAGTGTTCAAATTATATCCAGTCTTCGAAAGTTCGTCCATTTTT
GAAAGCATTCATCGAAATGTTTGTGTTTTTAAAATTTTGCCATAATAAAA
GAATAACATAATCATCCAACAGCTCGAATTTTTCGTCTCCTTTGACCGGA
CAGCTACTCAAAATATTTGCATTAGTTTTTTAAAACCTGTCTACTTTTGT
GATCGAATGTTGCCCAAAAATAATTAAATGTTTTGGAAACTCGAACACTT
ACGTGGCGCGTGAAATTATGTTAGGAGAAAACAGCTTTGATCAAAAATAT
TTCTTCTAAAATTGAAACGTAGAATTTTAATTTCTCCTGAATGGTTCAAC
AGTTTTGTTGTTTACCCGTTGTAAACACTGCGTCTTGTTTGTGGCGGGAC
GGCGGAAAAGTGGGCGTATCATTATTTTTGGCATTACAAAATAATACCCC
GTGGTAGGATAAAAGTGTGCAACCTAAATAAAATCATTCATATAATTACA
TCTTTAAACAAATGAAATAGTTTGTGCGGTTGATTCATCCAAAGTTTCTT
CACTTCTACAATATGTGTTGTTTTAACTTTTCATTAAAATGGTTCTTCGT
TTTTTGATACCGGTAGGCGTAGAATAATTTCTGTTTCTTTATCATTATAG
GTAGCTGGCATACTGCAAAGATCCAATTTCCTTGGTGTTCAAAGTTGGNN

Coding sequence (CDS) from alignment at sc0000054:255252..262151-

>TCONS_00005631 ID=TCONS_00005631|Name=TCONS_00005631|organism=Clytia hemisphaerica|type=CDS|length=5448bp|location=Sequence derived from alignment at sc0000054:255252..262151- (Clytia hemisphaerica)
GTAGCTGGCATACTGCAAAGATCCAATTTCCTTGGTGTTCAAAGTTGGAT
GCTGATTTCACTTGATAGTCCGAAGGTACCACTCCTATCGCTATGTGGAA
TTATATGGCCCATTATTTGCAACCTTCGTTCACTTTCTATTGGACATTCC
ACCTTCATCGGATGCACGAGCAACAAACACAAACAGATTGTCCCTTCCCA
CTGGCAACACCTGGCTTGTCTGCCTGATCATGTTAAAGTCACACCTTCTA
TCTAGCTGGTCGCTGTCACTATCACTTTACTATGCTATTTACAAAAGCAG
ATTACTTGAACACACTGGGCTGGATTTACAAAATGTCCCTTCTGGACTGT
TTTGCAACTGTTGAGCTCACAATTCATGGGAGAATATTTGTTGACAGATA
CAGTATCAACTTTGTTTCTGATCTATCACTTCCGTATACTGGAACGAAGA
TGGGGTACTTCTAAATTTATGCAAATGCAAGTGCTTCCAAGTTGATGATG
ATAGCAACTGGGATAGGATCAGTTAGCGTATATTTCTTGCCAACCAAATA
TTATCAGAGGTTGACGTTAAATCTAACAGATATTATCAATCAGGGACAGG
TGCTACTAACATCATGGCTGGGTTAGTCAAACCAGATTCTATTTCAACTC
TTGGATTCGATGGACAAAGTTTCTAGCTCAGGTAGCTGGCATACTGCAAA
GATCCAATTTCCTTGGTGTTCAAAGTTGGATGCTGATTTCACTTGATAGT
CCGAAGGTACCACTCCTATCGCTATGTGGAATTATATGGCCCATTATTTG
CAACCTTCGTTCACTTTCTATTGGACATTCCACCTTCATCGGATGCACGA
GCAACAAACACAAACAGATTGTCCCTTCCCACTGGCAACACCTGGCTTGT
CTGCCTGATCATGTTAAAGTCACACCTTCTATCTAGCTGGTCGCTGTCAC
TATCACTTTACTATGCTATTTACAAAAGCAGATTACTTGAACACACTGGG
CTGGATTTACAAAATGTCCCTTCTGGACTGTTTTGCAACTGTTGAGCTCA
CAATTCATGGGAGAATATTTGTTGACAGATACAGTATCAACTTTGTTTCT
GATCTATCACTTCCGTATACTGGAACGAAGATGGGGTACTTCTAAATTTA
TGCAAATGCAAGTGCTTCCAAGTTGATGATGATAGCAACTGGGATAGGAT
CAGTTAGCGTATATTTCTTGCCAACCAAATATTATCAGAGGTTGACGTTA
AATCTAACAGATATTATCAATCAGGGACAGGTGCTACTAACATCATGGCT
GGGTTAGTCAAACCAGATTCTATTTCAACTCTTGGATTCGATGGACAAAG
TTTCTAGCTCAGGTAGCTGGCATACTGCAAAGATCCAATTTCCTTGGTGT
TCAAAGTTGGATGCTGATTTCACTTGATAGTCCGAAGGTACCACTCCTAT
CGCTATGTGGAATTATATGGCCCATTATTTGCAACCTTCGTTCACTTTCT
ATTGGACATTCCACCTTCATCGGATGCACGAGCAACAAACACAAACAGAT
TGTCCCTTCCCACTGGCAACACCTGGCTTGTCTGCCTGATCATGTTAAAG
TCACACCTTCTATCTAGCTGGTCGCTGTCACTATCACTTTACTATGCTAT
TTACAAAAGCAGATTACTTGAACACACTGGGCTGGATTTACAAAATGTCC
CTTCTGGACTGTTTTGCAACTGTTGAGCTCACAATTCATGGGAGAATATT
TGTTGACAGATACAGTATCAACTTTGTTTCTGATCTATCACTTCCGTATA
CTGGAACGAAGATGGGGTACTTCTAAATTTATGCAAATGCAAGTGCTTCC
AAGTTGATGATGATAGCAACTGGGATAGGATCAGTTAGCGTATATTTCTT
GCCAACCAAATATTATCAGAGGTTGACGTTAAATCTAACAGATATTATCA
ATCAGGGACAGGTGCTACTAACATCATGGCTGGGTTAGTCAAACCAGATT
CTATTTCAACTCTTGGATTCGATGGACAAAGTTTCTAGCTCAGGTAGCTG
GCATACTGCAAAGATCCAATTTCCTTGGTGTTCAAAGTTGGATGCTGATT
TCACTTGATAGTCCGAAGGTACCACTCCTATCGCTATGTGGAATTATATG
GCCCATTATTTGCAACCTTCGTTCACTTTCTATTGGACATTCCACCTTCA
TCGGATGCACGAGCAACAAACACAAACAGATTGTCCCTTCCCACTGGCAA
CACCTGGCTTGTCTGCCTGATCATGTTAAAGTCACACCTTCTATCTAGCT
GGTCGCTGTCACTATCACTTTACTATGCTATTTACAAAAGCAGATTACTT
GAACACACTGGGCTGGATTTACAAAATGTCCCTTCTGGACTGTTTTGCAA
CTGTTGAGCTCACAATTCATGGGAGAATATTTGTTGACAGATACAGTATC
AACTTTGTTTCTGATCTATCACTTCCGTATACTGGAACGAAGATGGGGTA
CTTCTAAATTTATGCAAATGCAAGTGCTTCCAAGTTGATGATGATAGCAA
CTGGGATAGGATCAGTTAGCGTATATTTCTTGCCAACCAAATATTATCAG
AGGTTGACGTTAAATCTAACAGATATTATCAATCAGGGACAGGTGCTACT
AACATCATGGCTGGGTTAGTCAAACCAGATTCTATTTCAACTCTTGGATT
CGATGGACAAAGTTTCTAGCTCAGGTAGCTGGCATACTGCAAAGATCCAA
TTTCCTTGGTGTTCAAAGTTGGATGCTGATTTCACTTGATAGTCCGAAGG
TACCACTCCTATCGCTATGTGGAATTATATGGCCCATTATTTGCAACCTT
CGTTCACTTTCTATTGGACATTCCACCTTCATCGGATGCACGAGCAACAA
ACACAAACAGATTGTCCCTTCCCACTGGCAACACCTGGCTTGTCTGCCTG
ATCATGTTAAAGTCACACCTTCTATCTAGCTGGTCGCTGTCACTATCACT
TTACTATGCTATTTACAAAAGCAGATTACTTGAACACACTGGGCTGGATT
TACAAAATGTCCCTTCTGGACTGTTTTGCAACTGTTGAGCTCACAATTCA
TGGGAGAATATTTGTTGACAGATACAGTATCAACTTTGTTTCTGATCTAT
CACTTCCGTATACTGGAACGAAGATGGGGTACTTCTAAATTTATGCAAAT
GCAAGTGCTTCCAAGTTGATGATGATAGCAACTGGGATAGGATCAGTTAG
CGTATATTTCTTGCCAACCAAATATTATCAGAGGTTGACGTTAAATCTAA
CAGATATTATCAATCAGGGACAGGTGCTACTAACATCATGGCTGGGTTAG
TCAAACCAGATTCTATTTCAACTCTTGGATTCGATGGACAAAGTTTCTAG
CTCAGGTAGCTGGCATACTGCAAAGATCCAATTTCCTTGGTGTTCAAAGT
TGGATGCTGATTTCACTTGATAGTCCGAAGGTACCACTCCTATCGCTATG
TGGAATTATATGGCCCATTATTTGCAACCTTCGTTCACTTTCTATTGGAC
ATTCCACCTTCATCGGATGCACGAGCAACAAACACAAACAGATTGTCCCT
TCCCACTGGCAACACCTGGCTTGTCTGCCTGATCATGTTAAAGTCACACC
TTCTATCTAGCTGGTCGCTGTCACTATCACTTTACTATGCTATTTACAAA
AGCAGATTACTTGAACACACTGGGCTGGATTTACAAAATGTCCCTTCTGG
ACTGTTTTGCAACTGTTGAGCTCACAATTCATGGGAGAATATTTGTTGAC
AGATACAGTATCAACTTTGTTTCTGATCTATCACTTCCGTATACTGGAAC
GAAGATGGGGTACTTCTAAATTTATGCAAATGCAAGTGCTTCCAAGTTGA
TGATGATAGCAACTGGGATAGGATCAGTTAGCGTATATTTCTTGCCAACC
AAATATTATCAGAGGTTGACGTTAAATCTAACAGATATTATCAATCAGGG
ACAGGTGCTACTAACATCATGGCTGGGTTAGTCAAACCAGATTCTATTTC
AACTCTTGGATTCGATGGACAAAGTTTCTAGCTCAGGTAGCTGGCATACT
GCAAAGATCCAATTTCCTTGGTGTTCAAAGTTGGATGCTGATTTCACTTG
ATAGTCCGAAGGTACCACTCCTATCGCTATGTGGAATTATATGGCCCATT
ATTTGCAACCTTCGTTCACTTTCTATTGGACATTCCACCTTCATCGGATG
CACGAGCAACAAACACAAACAGATTGTCCCTTCCCACTGGCAACACCTGG
CTTGTCTGCCTGATCATGTTAAAGTCACACCTTCTATCTAGCTGGTCGCT
GTCACTATCACTTTACTATGCTATTTACAAAAGCAGATTACTTGAACACA
CTGGGCTGGATTTACAAAATGTCCCTTCTGGACTGTTTTGCAACTGTTGA
GCTCACAATTCATGGGAGAATATTTGTTGACAGATACAGTATCAACTTTG
TTTCTGATCTATCACTTCCGTATACTGGAACGAAGATGGGGTACTTCTAA
ATTTATGCAAATGCAAGTGCTTCCAAGTTGATGATGATAGCAACTGGGAT
AGGATCAGTTAGCGTATATTTCTTGCCAACCAAATATTATCAGAGGTTGA
CGTTAAATCTAACAGATATTATCAATCAGGGACAGGTGCTACTAACATCA
TGGCTGGGTTAGTCAAACCAGATTCTATTTCAACTCTTGGATTCGATGGA
CAAAGTTTCTAGCTCAGGTAGCTGGCATACTGCAAAGATCCAATTTCCTT
GGTGTTCAAAGTTGGATGCTGATTTCACTTGATAGTCCGAAGGTACCACT
CCTATCGCTATGTGGAATTATATGGCCCATTATTTGCAACCTTCGTTCAC
TTTCTATTGGACATTCCACCTTCATCGGATGCACGAGCAACAAACACAAA
CAGATTGTCCCTTCCCACTGGCAACACCTGGCTTGTCTGCCTGATCATGT
TAAAGTCACACCTTCTATCTAGCTGGTCGCTGTCACTATCACTTTACTAT
GCTATTTACAAAAGCAGATTACTTGAACACACTGGGCTGGATTTACAAAA
TGTCCCTTCTGGACTGTTTTGCAACTGTTGAGCTCACAATTCATGGGAGA
ATATTTGTTGACAGATACAGTATCAACTTTGTTTCTGATCTATCACTTCC
GTATACTGGAACGAAGATGGGGTACTTCTAAATTTATGCAAATGCAAGTG
CTTCCAAGTTGATGATGATAGCAACTGGGATAGGATCAGTTAGCGTATAT
TTCTTGCCAACCAAATATTATCAGAGGTTGACGTTAAATCTAACAGATAT
TATCAATCAGGGACAGGTGCTACTAACATCATGGCTGGGTTAGTCAAACC
AGATTCTATTTCAACTCTTGGATTCGATGGACAAAGTTTCTAGCTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003190XLOC_003190Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005631-exon-sc0000054-1575043694:261549..262151TCONS_00005631-exon-sc0000054-1575043694:261549..262151Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:261191..261250TCONS_00005631-exon-sc0000054-1575043694:261191..261250Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:260382..260509TCONS_00005631-exon-sc0000054-1575043694:260382..260509Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:258317..258439TCONS_00005631-exon-sc0000054-1575043694:258317..258439Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:258046..258155TCONS_00005631-exon-sc0000054-1575043694:258046..258155Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:257123..257258TCONS_00005631-exon-sc0000054-1575043694:257123..257258Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:256812..256865TCONS_00005631-exon-sc0000054-1575043694:256812..256865Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1575043694:255252..255301TCONS_00005631-exon-sc0000054-1575043694:255252..255301Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:261549..262151TCONS_00005631-exon-sc0000054-1510915933:261549..262151Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:261191..261250TCONS_00005631-exon-sc0000054-1510915933:261191..261250Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:260382..260509TCONS_00005631-exon-sc0000054-1510915933:260382..260509Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:258317..258439TCONS_00005631-exon-sc0000054-1510915933:258317..258439Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:258046..258155TCONS_00005631-exon-sc0000054-1510915933:258046..258155Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:257123..257258TCONS_00005631-exon-sc0000054-1510915933:257123..257258Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:256812..256865TCONS_00005631-exon-sc0000054-1510915933:256812..256865Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1510915933:255252..255301TCONS_00005631-exon-sc0000054-1510915933:255252..255301Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:261549..262151TCONS_00005631-exon-sc0000054-1491911889:261549..262151Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:261191..261250TCONS_00005631-exon-sc0000054-1491911889:261191..261250Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:260382..260509TCONS_00005631-exon-sc0000054-1491911889:260382..260509Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:258317..258439TCONS_00005631-exon-sc0000054-1491911889:258317..258439Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:258046..258155TCONS_00005631-exon-sc0000054-1491911889:258046..258155Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:257123..257258TCONS_00005631-exon-sc0000054-1491911889:257123..257258Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:256812..256865TCONS_00005631-exon-sc0000054-1491911889:256812..256865Clytia hemisphaericaexon
TCONS_00005631-exon-sc0000054-1491911889:255252..255301TCONS_00005631-exon-sc0000054-1491911889:255252..255301Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005631-proteinTCONS_00005631-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:255252..262151 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.74446	3.90519	13.1708	11.6151	0.252151	0.242471	1.09963	3.29806	5.18017	3.48407	0.449791	2.6576	2.41646	4.0849	3.304	3.92751	4.98353	5.48749	0	0	4.90944	5.25897	6.80697	7.59096	4.35237	0.95287	0.497171	1.02751	4.87532	4.79109
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004252 serine-type endopeptidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005631 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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