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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056383 ID=TCONS_00056383|Name=TCONS_00056383|organism=Clytia hemisphaerica|type=transcript|length=944bp
GTTTAGACTGTAGCCAGATGGTGTAGATTGCGACGCGTCAAAAACAATAC
GACAAGGTGTGCTTACCGAGTTCCCCTTCCACACAGCACGCCAAGGAATA
AAGTTCTGTATTGCATTGTCTCGAAGTGAGTGTTGGAAATCTTGTGGAAG
ATTTTCGACATATTCAACATAGCCGAGATGTTGTAGTTTTCTTTCTGACT
CTAGGATGTCCTCTTTATCTTTGATGTTCGAAGGATTGTTCAATTTACGA
AGTTGTTGTTGAAAGACTTTCATCGCGCGATCTTTGTTGTTAGCAAGTCG
ATTCGGAGTTGCGATGAATGGGAGTGAAGCTGATGTGATTGAATCTTCAA
TATTGATAGTGACTGATGCATTGATGATACTCTGCTCCACCTCTTCTCTT
AAGCTGATAGATTGGTATTCGTCGAAGTGTTTGCAGTCTTTACACGTTCT
ACAGGTTGGGCACCTGTAGGACACTTCACAGCCAGTTGACTCGACTTGTT
CGAACAAACGTTGCTGATGTGTGAGATGTACTTCTGAATGTTCTTTGTTT
TCAGGGAACATTTGTTGATCTTCACGATAACCAAGTGTGGATGGAATGAT
GGATGAGAAGTTTCTTCCATTGATGAAGAAAGCTGTTGAGTTGATTGAGT
AGAAACTTTTGTGGATTTCGGTGAACATCTTGTGTGGACCTCCAACGACA
CCCCTTCCTCCATCTGAATTGTTGAATGCTGATTCGAAGATGGATAGCCC
AGATTCCAGTTGATAGACAAGTTTCGGATGGTAGCGTAAATACTTTATAC
CTATCATAAGATCAACGTCTCCACCAACGATAGGTGGAAGTTCAGGTAGA
GTGGTAGTTTCTCCAGACGACTTGTGGTGATTGGCAATATCTTCCTTGAC
TTCTCGAAGTGGGTAAATTGGAAACCTGGAAGTAATCTGATCCA Run BLAST on NCBI protein sequence of TCONS_00056383-protein >TCONS_00056383-protein ID=TCONS_00056383-protein|Name=TCONS_00056383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
DQITSRFPIYPLREVKEDIANHHKSSGETTTLPELPPIVGGDVDLMIGIK
YLRYHPKLVYQLESGLSIFESAFNNSDGGRGVVGGPHKMFTEIHKSFYSI
NSTAFFINGRNFSSIIPSTLGYREDQQMFPENKEHSEVHLTHQQRLFEQV
ESTGCEVSYRCPTCRTCKDCKHFDEYQSISLREEVEQSIINASVTINIED
SITSASLPFIATPNRLANNKDRAMKVFQQQLRKLNNPSNIKDKEDILESE
RKLQHLGYVEYVENLPQDFQHSLRDNAIQNFIPWRAVWKGNSVSTPCRIV
FDASQSTPSGYSLN Run BLAST on NCBI transcript from alignment at scaffold_274:59323..60266 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056383 ID=TCONS_00056383|Name=TCONS_00056383|organism=Clytia hemisphaerica|type=transcript|length=944bp|location=Sequence derived from alignment at scaffold_274:59323..60266 (Clytia hemisphaerica)
TGGATCAGATTACTTCCAGGTTTCCAATTTACCCACTTCGAGAAGTCAAG
GAAGATATTGCCAATCACCACAAGTCGTCTGGAGAAACTACCACTCTACC
TGAACTTCCACCTATCGTTGGTGGAGACGTTGATCTTATGATAGGTATAA
AGTATTTACGCTACCATCCGAAACTTGTCTATCAACTGGAATCTGGGCTA
TCCATCTTCGAATCAGCATTCAACAATTCAGATGGAGGAAGGGGTGTCGT
TGGAGGTCCACACAAGATGTTCACCGAAATCCACAAAAGTTTCTACTCAA
TCAACTCAACAGCTTTCTTCATCAATGGAAGAAACTTCTCATCCATCATT
CCATCCACACTTGGTTATCGTGAAGATCAACAAATGTTCCCTGAAAACAA
AGAACATTCAGAAGTACATCTCACACATCAGCAACGTTTGTTCGAACAAG
TCGAGTCAACTGGCTGTGAAGTGTCCTACAGGTGCCCAACCTGTAGAACG
TGTAAAGACTGCAAACACTTCGACGAATACCAATCTATCAGCTTAAGAGA
AGAGGTGGAGCAGAGTATCATCAATGCATCAGTCACTATCAATATTGAAG
ATTCAATCACATCAGCTTCACTCCCATTCATCGCAACTCCGAATCGACTT
GCTAACAACAAAGATCGCGCGATGAAAGTCTTTCAACAACAACTTCGTAA
ATTGAACAATCCTTCGAACATCAAAGATAAAGAGGACATCCTAGAGTCAG
AAAGAAAACTACAACATCTCGGCTATGTTGAATATGTCGAAAATCTTCCA
CAAGATTTCCAACACTCACTTCGAGACAATGCAATACAGAACTTTATTCC
TTGGCGTGCTGTGTGGAAGGGGAACTCGGTAAGCACACCTTGTCGTATTG
TTTTTGACGCGTCGCAATCTACACCATCTGGCTACAGTCTAAAC Coding sequence (CDS) from alignment at scaffold_274:59323..60266 >TCONS_00056383 ID=TCONS_00056383|Name=TCONS_00056383|organism=Clytia hemisphaerica|type=CDS|length=942bp|location=Sequence derived from alignment at scaffold_274:59323..60266 (Clytia hemisphaerica)
GATCAGATTACTTCCAGGTTTCCAATTTACCCACTTCGAGAAGTCAAGGA
AGATATTGCCAATCACCACAAGTCGTCTGGAGAAACTACCACTCTACCTG
AACTTCCACCTATCGTTGGTGGAGACGTTGATCTTATGATAGGTATAAAG
TATTTACGCTACCATCCGAAACTTGTCTATCAACTGGAATCTGGGCTATC
CATCTTCGAATCAGCATTCAACAATTCAGATGGAGGAAGGGGTGTCGTTG
GAGGTCCACACAAGATGTTCACCGAAATCCACAAAAGTTTCTACTCAATC
AACTCAACAGCTTTCTTCATCAATGGAAGAAACTTCTCATCCATCATTCC
ATCCACACTTGGTTATCGTGAAGATCAACAAATGTTCCCTGAAAACAAAG
AACATTCAGAAGTACATCTCACACATCAGCAACGTTTGTTCGAACAAGTC
GAGTCAACTGGCTGTGAAGTGTCCTACAGGTGCCCAACCTGTAGAACGTG
TAAAGACTGCAAACACTTCGACGAATACCAATCTATCAGCTTAAGAGAAG
AGGTGGAGCAGAGTATCATCAATGCATCAGTCACTATCAATATTGAAGAT
TCAATCACATCAGCTTCACTCCCATTCATCGCAACTCCGAATCGACTTGC
TAACAACAAAGATCGCGCGATGAAAGTCTTTCAACAACAACTTCGTAAAT
TGAACAATCCTTCGAACATCAAAGATAAAGAGGACATCCTAGAGTCAGAA
AGAAAACTACAACATCTCGGCTATGTTGAATATGTCGAAAATCTTCCACA
AGATTTCCAACACTCACTTCGAGACAATGCAATACAGAACTTTATTCCTT
GGCGTGCTGTGTGGAAGGGGAACTCGGTAAGCACACCTTGTCGTATTGTT
TTTGACGCGTCGCAATCTACACCATCTGGCTACAGTCTAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056383-exon-scaffold_274-1491911889:59323..60266 | TCONS_00056383-exon-scaffold_274-1491911889:59323..60266 | Clytia hemisphaerica | exon |
| TCONS_00056383-exon-scaffold_274-1510915933:59323..60266 | TCONS_00056383-exon-scaffold_274-1510915933:59323..60266 | Clytia hemisphaerica | exon |
| TCONS_00056383-exon-scaffold_274-1575043694:59323..60266 | TCONS_00056383-exon-scaffold_274-1575043694:59323..60266 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_274 | supercontig | scaffold_274:59323..60266 . |
Blast
The following BLAST results are available for this feature:
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